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SEPT7 Gene

protein-coding   GIFtS: 59

GC07P035807
septin 7
(Previous name: CDC10 cell division cycle 10 homolog (S. cerevisiae) )
Symbol approved by the HUGO Gene Nomenclature Committee (HGNC) database
(Previous symbol: CDC10)
Services    
(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc , and/or 7Ensembl, 8miRBase)
About This Section

Aliases
CDC10 2, 3, 5
CDC3 1, 2
Nbla02942 2
SEPT7A 1, 2
Descriptions
CDC10 (cell division cycle 10, S. cerevisiae, homolog) 2
CDC10 cell division cycle 10 homolog 2
CDC10 cell division cycle 10 homolog (S. cerevisiae) 1
CDC10 protein homolog 3
cell division cycle 10 2
septin 7 2
External Ids
HGNC: 17171
Entrez Gene: 9892
UniProtKB: Q161813
Ensembl: ENSG000001225457
Search outside databases for aliases for SEPT7 gene

Previous GC identifer: GC07P035615

(According to Entrez Gene, Wikipedia's Gene Wiki,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

EntrezGene summary for SEPT7:
This gene encodes a protein that is highly similar to the CDC10 protein of Saccharomyces
cerevisiae. The protein also shares similarity with Diff 6 of Drosophila and with H5 of mouse.
Each of these similar proteins, including the yeast CDC10, contains a GTP-binding motif. The yeast
CDC10 protein is a structural component of the 10 nm filament which lies inside the cytoplasmic
membrane and is essential for cytokinesis. Although the exact function of this gene has not yet
been determined, its high similarity to yeast CDC10 and the high conservative nature of eukaryotic
cell cycle machinery suggest a similar role to that of its yeast counterpart. Alternative splicing
results in two transcript variants encoding different isoforms. [provided by RefSeq]

UniProtKB/Swiss-Prot: SEPT7_HUMAN, Q16181
Function: Required for normal progress through mitosis. Involved in cytokinesis. Required for
normal association of CENPE with the kinetochore

Gene Wiki entry for SEPT7

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to UCSC and Ensembl, Transcription factor binding sites according to SABiosciences)
About This Section

Genomic View:
UCSC Golden Path with GeneCards custom track

 Transcription factor binding sites upstream to the SEPT7 gene  

Entrez Gene cytogenetic band: 7p14.3-p14.1   Ensembl cytogenetic band:  7p14.2   HGNC cytogenetic band: 7p14.2

SEPT7 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)

GeneLoc gene densities for chromosome 7         GeneLoc Exon Structure

GeneLoc location for GC07P035807:     (about GC identifiers)

Start:
35,807,152 bp from pter
End:
35,911,442 bp from pter
Size:
104,291 bases
Orientation:
plus strand

1 alternative location:
Chr7+,CRA_TCAG 35,878,676-35,982,948     
RefSeq DNA sequence:
NC_000007.12  NT_007819.16  NT_079592.2  
(According to 1UniProtKB, and/or Ensembl, Phosphorylation sites according to 2Phosphosite, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Enzo Life Sciences, Abnova, OriGene and/or, Abcam,
Biochemical Assays by Invitrogen, Millipore, R&D Systems, Cell Signaling Technology, and/or Enzo Life Sciences, Ontologies according to Gene Ontology Consortium 01 Apr 2009 and Entrez Gene, Antibodies by Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Cell Signaling Technology, Abcam, Abnova, and/or Novus Biologicals)
About This Section

UniProtKB/Swiss-Prot: SEPT7_HUMAN, Q16181 (See protein sequence)
Recommended Name: Septin-7  
Size: 437 amino acids; 50680 Da
Subunit: Heterohexamer composed of two heterotrimers containing one copy each of SEPT2, SEPT6 and
SEPT7. The asymmetrical heterotrimers associate head-to-head to form a hexameric unit that
assembles into filaments. Interacts directly with CENPE and links CENPE to septin filaments
composed of SEPT2, SEPT6 and SEPT7
Subcellular location: Cytoplasm. Kinetochore. Spindle. Note=Distributed throughout the cytoplasm in
prometaphase cells. Associated with the spindle during metaphase. Associated with the central
spindle and at the cleavage furrow in anaphase cells. Detected at the midbody in telophase
PDB structures from and Proteopedia :
2QAG (3D)    
Secondary accessions: Q52M76 Q6NX50
Alternative splicing: 2 isoforms:  Q16181-1   Q16181-2   

Post-translational modifications:

  • View phosphorylation sites using PhosphoSite2


  • REFSEQ proteins (2 alternative transcripts): 
    NP_001011553.2  NP_001779.3  


    ENSEMBL proteins: 
    ENSP00000381992 ENSP00000344868 ENSP00000381993 


    Human Recombinant Proteins 
    Browse Drug Discovery Central at Invitrogen for human recombinant proteins
    Browse Purified and Recombinant Proteins at Millipore
    Browse Human Recombinant Proteins at Sigma-Aldrich  
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    Recombinant Proteins from Abcam (SEPT7)
    Human Recombinant Proteins from Abnova (SEPT7)
                    Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 

    5/6 Gene Ontology (GO) cellular component terms (links to tree view) (see all 6 ):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000777 condensed chromosome kinetochore IEA--
    GO:0001725 stress fiber IDA15485874
    GO:0005634 nucleus IDA15485874
    GO:0005737 cytoplasm IEA--
    GO:0005819 spindle IEA--
    About this table

    Antibodies for SEPT7: 
    Browse Antibodies Central at Invitrogen
    Browse Millipore's Extensive Line of Mono- and Polyclonal Antibodies
    Sigma-Aldrich Antibodies for SEPT7
    Browse R&D Systems for Antibodies
    Antibodies from Abcam (SEPT7), each with their AbpromiseSM
    Monoclonal and Polyclonal Antibodies from Abnova (SEPT7)
    Novus Biologicals Antibody for SEPT7

    Assays for SEPT7: 
    Browse Invitrogen for biochemical assays
    Browse Kits and Assays available from Millipore
    Browse R&D Systems for biochemical assays
    Browse biochemical assays available from Enzo Life Sciences

    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    3 InterPro domains/families:
     IPR000038 Cell_Div_GTP_bd
     IPR016491 Septin
     IPR008115 Septin7


       GeneDecks  SEPT7 for the domains selected above  
    About GeneDecksing

    Graphical View of Domain Structure for InterPro Entry Q16181

    ProtoNet protein and cluster: Q16181

    2 Blocks protein families:
    IPB000038 Cell division/GTP binding protein
    IPB008115 Septin 7 signature


    UniProtKB/Swiss-Prot: SEPT7_HUMAN, Q16181
    Similarity: Belongs to the septin family

    (According to MGI Jun 06 2009, UniProtKB, IUBMB,and/or Genatlas,
    shRNA from OriGene, Sigma-Aldrich, RNAi from Sigma-Aldrich,
    RNAi Products, Clones, and Q-PCR Products from Invitrogen, Millipore, OriGene, and/or Abnova, siRNAs from Applied Biosystems, SYBR primers from OriGene, Cell-based Assays from Millipore, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
    About This Section

    Inhib.
    RNA:
    Invitrogen RNAi Products for gene knock-down (SEPT7)
    Browse for Gene Knock-down Tools from Millipore
    Browse Abnova for Chimera RNAi Products
                   OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2): NM_001011553

                  Applied Biosystems Silencer® siRNAs for SEPT7

                  Sigma-Aldrich siRNA and siRNA Panels for SEPT7  
                         Sigma-Aldrich shRNA for SEPT7  
                         Explore Sigma-Aldrich super-pooled esiRNAs  

    Clones:Invitrogen Clones for SEPT7
    Browse Clones for the Expression of Recombinant Proteins Available from Millipore
                   OriGene GFP tagged cDNA clones in CMV expression vector (see all 2): NM_001011553
                                     Myc/DDK tagged cDNA clones in CMV expression vector (see all 2): NM_001011553
                                     untagged cDNA clones in CMV expression vector (see all 4): NM_001011553 

    Primers: Browse Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers
                  OriGene genome-wide validated SYBR primer pairs: NM_001788

    UniProtKB/Swiss-Prot: SEPT7_HUMAN, Q16181
    Function: Required for normal progress through mitosis. Involved in cytokinesis. Required for
    normal association of CENPE with the kinetochore

    4 Gene Ontology (GO) molecular function terms (links to tree view):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000166 nucleotide binding IEA--
    GO:0005198 structural molecule activity TAS8037772
    GO:0005515 protein binding IPI15485874 17685441
    GO:0005525 GTP binding TAS8037772
    About this table

    (Pathways according to Invitrogen (maps by GeneGo), Millipore, Cell Signaling Technology, Sigma-Aldrich, KEGG and/or UniProtKB,
    Sets of similar genes according to GeneDecks, Proteins Network according to SABiosciences, Interactions according to 1UniProtKB, 2MINT, and/or 3STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
    About This Section


     Gene Network CentralTM Interacting Genes and Proteins Network for  SEPT7 


    5/15 Interacting proteins for SEPT7 (ENSP000003448683) via UniProtKB, MINT, and/or STRING (see all 15 )
    InteractantInteraction Details
    GeneCardExternal ID(s)
    SEPT2ENSP000003531573STRING (score=.983)
    PIAS2ENSP000002621613STRING (score=.924)
    SEPT6ENSP000003415243STRING (score=.91)
    SEPT9ENSP000003291613STRING (score=.879)
    CDC42EP5ENSP000003012003STRING (score=.871)
    About this table

    4 Gene Ontology (GO) biological process terms (links to tree view):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000910 cytokinesis TAS8037772
    GO:0007049 cell cycle IEA--
    GO:0007067 mitosis IEA--
    GO:0051291 protein heterooligomerization IDA15485874
    About this table
    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, Sigma-Aldrich, Tocris Bioscience, and/or Novoseek and Drugs according to Enzo Life Sciences and/or PharmGKB)
    About This Section

    Browse drugs & compounds from Enzo Life Sciences
    Browse Small Molecules at Sigma-Aldrich

    Browse Tocris compounds for SEPT7

    (GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 219 Homo sapiens; Jun 2 2009) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView,
    non coding RNAs according to RNAdb,
    ESTs according to GeneTide,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from Invitrogen, Millipore, and/or Abnova,
    siRNAs from Applied Biosystems, Sigma-Aldrich,
    shRNA from Sigma-Aldrich, OriGene,
    Tagged/untagged cDNA clones from OriGene,
    Expression Assays from Applied Biosystems)
    About This Section

    Inhib.
    RNA:
    Invitrogen RNAi Products for gene knock-down (SEPT7)
    Browse for Gene Knock-down Tools from Millipore
    Browse Abnova for Chimera RNAi Products
                   OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2): NM_001011553

                  Sigma-Aldrich siRNA and siRNA Panels for SEPT7  
                         Sigma-Aldrich shRNA for SEPT7  
                         Explore Sigma-Aldrich super-pooled esiRNAs  

    Applied Biosystems Silencer® siRNAs: 

    NM_001011553  NM_001788  

    REFSEQ mRNAs for SEPT7 gene (2 alternative transcripts): 

    NM_001011553.2   NM_001788.4   

    Applied Biosystems TaqMan ® Gene Expression Assays: 

    NM_001011553  NM_001788  

                   OriGene GFP tagged cDNA clones in CMV expression vector (see all 2): NM_001011553
                                     Myc/DDK tagged cDNA clones in CMV expression vector (see all 2): NM_001011553
                                     untagged cDNA clones in CMV expression vector (see all 4): NM_001011553 

    Additional cDNA sequence: 

    AB073389.1 AB209677.1 AK223225.1 AK223241.1 AK290545.1 AK297883.1 AK298453.1 AK300601.1 
    AL050392.1 BC022442.1 BC025987.2 BC067264.1 BC093640.1 BC093642.1 BC107718.1 BX571755.1 
    BX648365.1 CR591983.1 CR593525.1 CR598145.1 CR609589.1 CR623918.1 CR625618.1 DQ232879.1 
    S72008.1 

    24/64 DOTS entries (see all 64 ):

    DT.308399  DT.100886352  DT.100886331  DT.100886359  DT.101985258  DT.121043736  DT.100886338  DT.86835742 
    DT.100045052  DT.121043639  DT.121043616  DT.121043705  DT.121043741  DT.100886361  DT.121043642  DT.121043702 
    DT.121043623  DT.121043758  DT.97818303  DT.91859297  DT.121043646  DT.121043689  DT.121043712  DT.121043614 

    24/848 AceView cDNA sequences (see all 848 ):

    BM874620 AI753264 BE044042 Y08710 AA633339 BM679420 AW675763 BU608300 
    AI630074 BM706335 BM907533 CR609589 AI569394 AA034280 BP343109 CD557725 
    CK819046 BF969659 AI862835 AA582550 T16432 BE043954 BE088931 AL044746 

    highest scoring ESTs for SEPT7:

    S72008 AA010112 AA017214 AA028970 AA034512 AA043354 AA089595 AA099199 AA101143 AA121549 

    Unigene Cluster for SEPT7:

    Septin 7
    Hs.191346  [show with all ESTs]
    Unigene Representative Sequence: AB209677


    GeneLoc Exon Structure

    5/9 Alternative Splicing Database (ASD) splice patterns (SP) for SEPT7 (see all 9 )

    ExUns: 1a · 1b ^ 2a · 2b · 2c · 2d ^ 3 ^ 4a · 4b ^ 5 ^ 6 ^ 7 ^ 8 ^ 9a · 9b ^ 10 ^ 11 ^ 12a · 12b ^ 13a · 13b ^ 14a · 14b ^ 15
    SP1:                                                                                                                    -                           
    SP2:              -     -     -     -     -     -     -     -                                                                                       
    SP3:                          -     -           -     -     -                                                                                       
    SP4:                                            -     -     -                                                                                       
    SP5:                                                        -                                                                                       

    About this scheme

    ECgene alternative splicing isoforms for SEPT7

    3 Ensembl transcripts including schematic representations:
    ENST00000399034  ENST00000350320  ENST00000399035  
    (Experimental results according to 1GeneNote and GNF BioGPS,
    probe sets-to-genes annotations according to 2GeneAnnot , 3GeneTide , Sets of similar genes according to GeneDecks, Electronic Northern calculations according to data from UniGene (Build 219 Homo sapiens), SAGE tags according to CGAP, plus additional links to SOURCE, and/or GNF BioGPS, and/or EXPOLDB, and/or UniProtKB,
    Expression Assays from Applied Biosystems )
    About This Section

    SEPT7 expression in normal and diseased human tissues

     Applied Biosystems TaqMan ® Gene Expression Assays for SEPT7

    1 / 2 / 3

    4 probe-sets matching SEPT7 gene


    Affymetrix
    probe-set
    Array  GeneAnnot data GeneNote data GeneTide data
    # genes Sensitivity Specificity Correlation Length Gb_Accession Consensus Uniqueness Score Rank

    32175_at2, 3 U95-A 1 0.81 1.00 0.71 1.25 S72008 1.00 1.00 1.00 1

    61689_at2, 3 U95-C 1 0.31 1.00 0.84 0.76 AI831470 0.20 0.25 0.23 2

    213151_s_at2, 3 U133-A 1 1.00 1.00 -- -- AU157515 0.80 1.00 0.91 1

    213151_s_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --
    About this table
    Data from (Publications) and GNF BioGPS
        About these images
    About these images

    CGAP SAGE TAG: --

    SOURCE GeneReport for Unigene cluster: Hs.191346

    Expression variation in blood from EXPOLDB for SEPT7

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD and/or 5MGI Jun 06 2009, with possible further links to Flybase and/or WormBase, Gene Trees according to Ensembl)
    About This Section


    Orthologs for SEPT7 gene from 5/20 species (see all 20 )
    Organism Gene Locus Description Human
    Similarity
    NCBI accessions
    dog
    (Canis familiaris)
    SEPT71   -- septin 7 96.17(n)
    99.48(a)
    475284  XM_532516.2  XP_532516.2 
    chimpanzee
    (Pan troglodytes)
    SEPT71   -- septin 7 99.84(n)
    99.76(a)
    463349  NM_001009103.1  NP_001009103.1 
    cow
    (Bos taurus)
    SEPT71   -- septin 7 96.41(n)
    100(a)
    408000  NM_001001168.1  NP_001001168.1 
    rat
    (Rattus norvegicus)
    Sept71   -- septin 7 94.11(n)
    99.08(a)
    64551  NM_022616.1  NP_072138.1 
    mouse
    (Mus musculus)
    Sept71, 5 95
    septin 71, 5 95.04(n)1
    99.08(a)1
    2350721  NM_009859.31  NP_033989.21 
     AF2632855  AJ2237825  (see all 25)
    About this table        Species with no ortholog for SEPT7

    ENSEMBL Gene Tree for SEPT7
    (Paralogs according to 1HomoloGene
    and 2Ensembl, Pseudogenes according to 3Pseudogene.org)
    About This Section

    Paralogs for SEPT7 gene
    ENSG000002147652  SEPT22  ENSG000001205552  LOC4416012  

    Pseudogenes
    5 related pseudogenes


    (According to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, and UniProtKB, Linkage Disequilibrium by HapMap, Genotyping Reagents from Applied Biosystems)
    About This Section


    10/422 NCBI SNPs in SEPT7 are shown (see all 422 )
    (Click for Applied Biosystems TaqMan ® Genotyping Assay)  (see all 81)
    ABGenomic DataTranscription DataAllele Frequencies
    SNP IDValidChr 7 posSequenceRecsAA
    Chg
    TypeMoreRecsAllele
    freq
    PopTotal
    sample
    More
    ------------
    rs102552931,2
    A,C,F,H35911937(+) CCCTGA/GAAACT 2 -- ng3112Minor allele frequency- N:0.00EU EA WA NA 1054
    --
    rs27155971,2
    A,C,F,H35911727(-) cagtcG/Aagtcg 2 -- ng314Minor allele frequency- A:0.12EU EA WA 392
    --
    rs102550661,2
    A,C35911709(+) agtgcA/Ggtggc 2 -- ng310--------
    --
    rs102605091,2
    C,F35805699(+) TCAAGA/GTATTT 2 -- ng513Minor allele frequency- G:0.04NA 140
    rs119771241,2
    C35806564(+) CACTTC/TTCACC 2 -- ng510--------
    rs119733991,2
    C35806288(+) GGGAAC/TGTTCC 2 -- ng510--------
    rs27108011,2
    A,C,F,H,O35906831(-) CAACAT/CGTCCT 2 -- int17Minor allele frequency- C:0.45NA EU EA WA 554
    rs27278521,2
    A,C,F,H,O35853128(-) CTGCAT/CGGTCT 2 -- int111Minor allele frequency- C:0.06EU EA WA NA 980
    rs14206421,2
    A,C,F,H,O35836911(+) AAGGAT/GTATCT 2 -- int111Minor allele frequency- G:0.39NA EA EU 872
    --
    rs27156041,2
    A,C,F,H,O35870905(+) GATATG/ATAGGA 2 -- int17Minor allele frequency- A:0.46EU EA WA NA 560
    About this table

    HapMap Linkage Disequilibrium images for SEPT7 (up to first 250kb)

    (in which this Gene is Involved, According to OMIM, UniProtKB, PharmGKB, Genatlas, GeneTests, Blood group antigen gene mutations by BGMUT, HGMD, GAD, HuGE Navigator, BCGD, and/or TGDB.)
    About This Section

    OMIM: 603151

    (Possibly Related Articles in Doctor's Guide)
    About This Section

      --

    (in PubMed. Associations of this gene to articles via 1Novoseek, 2HGNC, 3Entrez Gene, 4UniProtKB/Swiss-Prot, 5UniProtKB/TrEMBL, 6GAD, and/or 7PharmGKB)
    About This Section

    10/34 PubMed articles for SEPT7 gene (see all 34 ):
    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section

     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)
    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, and/or H-InvDB)
    About This Section

    Entrez Gene: 989 HGNC: 1717 AceView: CDC10 Ensembl:ENSG00000122545 euGenes: HUgn989
    ECgene: SEPT7 H-InvDB: SEPT7
    (According to HUGE)
    About This Section

      --
    (According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section

    NameDescription
    ATLAS Chromosomes in Cancer entry for SEPT7 Genetics and Cytogenetics in Oncology and Haematology
    (Available from WIS Yeda, Salk, Tufts)
    About This Section

      --
    (Reagents available from Applied Biosystems, Antibodies and assays by Cell Signaling Technology, Abcam, Novus Biologicals,
    Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich,
    Enzo Life Sciences, and/or Tocris Bioscience)
    About This Section



    Products for SEPT7:
     TaqMan ® Gene Expression Assays
     TaqMan ® Genotyping Assays
      Free SNP selection tool



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     Predesigned and custom siRNAs for SEPT7 Antibodies for SEPT7
     Explore super-pooled esiRNAs Browse proteins at Sigma-Aldrich
     Lentivirus-delivered shRNAs for SEPT7 Browse small molecules at Sigma-Aldrich
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     Antibodies for SEPT7

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