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Aliases for SEPHS1P2 Gene

Subcategory (RNA class) for SEPHS1P2 Gene

lncRNA

Aliases for SEPHS1P2 Gene

  • Selenophosphate Synthetase 1 Pseudogene 2 2 3
  • AC091078.2 5

External Ids for SEPHS1P2 Gene

ORGUL Members for SEPHS1P2 Gene

Previous GeneCards Identifiers for SEPHS1P2 Gene

  • GC15M093975
  • GC15M093977
  • GC15M094108
  • GC15M094343
  • GC15M094525
  • GC15M094797

Summaries for SEPHS1P2 Gene

GeneCards Summary for SEPHS1P2 Gene

SEPHS1P2 (Selenophosphate Synthetase 1 Pseudogene 2) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for SEPHS1P2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SEPHS1P2 Gene

Genomics for SEPHS1P2 Gene

Regulatory Elements for SEPHS1P2 Gene

Enhancers for SEPHS1P2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH15H092680 1.3 Ensembl ENCODE dbSUPER 14.6 +749.1 749096 2 ZSCAN5A HDGF CTCF ZBTB21 HINFP ZNF493 CEBPG RAD21 ZKSCAN1 YY1 FAM174B C15orf32 LOC104613533 ENO1P2 SEPHS1P2 LOC100421632 ENSG00000258909 GC15M096245 PIR42313 LOC105370975
GH15H092683 1 ENCODE dbSUPER 14.6 +747.6 747592 0 ZSCAN5A HDGF CTCF HINFP ZNF493 RAD21 ZKSCAN1 CC2D1A SMC3 ZNF207 C15orf32 LOC104613533 ENO1P2 SEPHS1P2 LOC100421632 ENSG00000258909 GC15M096245 PIR42313 LOC105370975
GH15H093455 0.2 ENCODE 5 -24.6 -24598 0 SEPHS1P2 PIR52663 LOC105370982
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SEPHS1P2 on UCSC Golden Path with GeneCards custom track

Genomic Location for SEPHS1P2 Gene

Chromosome:
15
Start:
93,430,657 bp from pter
End:
93,431,217 bp from pter
Size:
561 bases
Orientation:
Minus strand

Genomic View for SEPHS1P2 Gene

Genes around SEPHS1P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SEPHS1P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SEPHS1P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SEPHS1P2 Gene

Proteins for SEPHS1P2 Gene

Post-translational modifications for SEPHS1P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SEPHS1P2 Gene

Domains & Families for SEPHS1P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SEPHS1P2 Gene

Function for SEPHS1P2 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for SEPHS1P2
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SEPHS1P2 Gene

Localization for SEPHS1P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SEPHS1P2 Gene

Pathways & Interactions for SEPHS1P2 Gene

SuperPathways for SEPHS1P2 Gene

No Data Available

Interacting Proteins for SEPHS1P2 Gene

Gene Ontology (GO) - Biological Process for SEPHS1P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SEPHS1P2 Gene

Drugs & Compounds for SEPHS1P2 Gene

No Compound Related Data Available

Transcripts for SEPHS1P2 Gene

mRNA/cDNA for SEPHS1P2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for SEPHS1P2
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for SEPHS1P2 Gene

No ASD Table

Relevant External Links for SEPHS1P2 Gene

GeneLoc Exon Structure for
SEPHS1P2
ECgene alternative splicing isoforms for
SEPHS1P2

Expression for SEPHS1P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SEPHS1P2 Gene

mRNA differential expression in normal tissues according to GTEx for SEPHS1P2 Gene

This gene is overexpressed in Testis (x53.0).

NURSA nuclear receptor signaling pathways regulating expression of SEPHS1P2 Gene:

SEPHS1P2
genes like me logo Genes that share expression patterns with SEPHS1P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SEPHS1P2 Gene

Orthologs for SEPHS1P2 Gene

Evolution for SEPHS1P2 Gene

ENSEMBL:
Gene Tree for SEPHS1P2 (if available)
TreeFam:
Gene Tree for SEPHS1P2 (if available)

No data available for Orthologs for SEPHS1P2 Gene

Paralogs for SEPHS1P2 Gene

No data available for Paralogs for SEPHS1P2 Gene

Variants for SEPHS1P2 Gene

Relevant External Links for SEPHS1P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SEPHS1P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SEPHS1P2 Gene

Disorders for SEPHS1P2 Gene

No disorders were found for SEPHS1P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SEPHS1P2 Gene

Publications for SEPHS1P2 Gene

  1. Genome-wide association study of bipolar disorder accounting for effect of body mass index identifies a new risk allele in TCF7L2. (PMID: 24322204) Winham SJ … Biernacka JM (Molecular psychiatry 2014) 3 60

Products for SEPHS1P2 Gene

Sources for SEPHS1P2 Gene

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