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Aliases for SEM1P1 Gene

Aliases for SEM1P1 Gene

  • SEM1, 26S Proteasome Complex Subunit Pseudogene 1 2 3
  • Split Hand/Foot Malformation (Ectrodactyly) Type 1 Pseudogene 1 2 3 5
  • Deleted In Split Hand/Split Foot 1 Pseudogene 2 3
  • SHFM1P1 3 5
  • Split Hand/Foot Malformation (Ectrodactyly) Type 1 Pseudogene 2
  • Deleted In Split-Hand/Split-Foot 1pseudogene 3
  • DSS1P1 3
  • SHFM1P 3

External Ids for SEM1P1 Gene

Previous HGNC Symbols for SEM1P1 Gene

  • SHFM1P
  • SHFM1P1

Summaries for SEM1P1 Gene

GeneCards Summary for SEM1P1 Gene

SEM1P1 (SEM1, 26S Proteasome Complex Subunit Pseudogene 1) is a Pseudogene. Diseases associated with SEM1P1 include Split Foot and Split Hand Foot Malformation.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SEM1P1 Gene

Genomics for SEM1P1 Gene

Regulatory Elements for SEM1P1 Gene

Enhancers for SEM1P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05F081898 0.6 Ensembl 0.4 +6.2 6163 1.2 PKNOX1 CBX3 CREB3L1 SIN3A ZNF2 RAD21 YY1 ZNF143 KLF7 DEK ATG10 ATG10-AS1 SEM1P1
GH05F081908 0.6 Ensembl 0.3 +16.7 16663 0.6 SMARCE1 CTCF HDAC1 TAL1 ZNF407 FOXA1 ARID1B SMARCA4 FOXK2 IKZF1 SEM1P1 ATG10
GH05F081856 0.7 Ensembl ENCODE 0.3 -35.0 -35043 1.3 CTCF PKNOX1 SIN3A ZBTB8A REST RAD21 JUND HMBOX1 ATG10 ATG10-AS1 ATP6AP1L ENSG00000249483 SEM1P1
GH05F081855 0.6 Ensembl 0.3 -37.3 -37338 0.2 PKNOX1 NRF1 MAFG MEF2D ZNF316 ATF3 SMARCA4 PBX2 ADNP NFE2 ENSG00000249483 SEM1P1
GH05F081849 1 FANTOM5 ENCODE 0.2 -40.4 -40434 4.8 PKNOX1 CREB3L1 ARID4B SIN3A FEZF1 DMAP1 YY1 CBX5 ZNF207 ZNF263 ATP6AP1L SSBP2 PPIAP11 ENSG00000249483 SEM1P1
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around SEM1P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for SEM1P1 Gene

Chromosome:
5
Start:
81,892,438 bp from pter
End:
81,892,891 bp from pter
Size:
454 bases
Orientation:
Plus strand

Genomic View for SEM1P1 Gene

Genes around SEM1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SEM1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SEM1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SEM1P1 Gene

Proteins for SEM1P1 Gene

Post-translational modifications for SEM1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SEM1P1 Gene

Domains & Families for SEM1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SEM1P1 Gene

Function for SEM1P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SEM1P1 Gene

Localization for SEM1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SEM1P1 Gene

Pathways & Interactions for SEM1P1 Gene

SuperPathways for SEM1P1 Gene

No Data Available

Interacting Proteins for SEM1P1 Gene

Gene Ontology (GO) - Biological Process for SEM1P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SEM1P1 Gene

Transcripts for SEM1P1 Gene

mRNA/cDNA for SEM1P1 Gene

(7) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SEM1P1 Gene

No ASD Table

Relevant External Links for SEM1P1 Gene

GeneLoc Exon Structure for
SEM1P1
ECgene alternative splicing isoforms for
SEM1P1

Expression for SEM1P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of SEM1P1 Gene:

SEM1P1
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for SEM1P1 Gene

Orthologs for SEM1P1 Gene

Evolution for SEM1P1 Gene

ENSEMBL:
Gene Tree for SEM1P1 (if available)
TreeFam:
Gene Tree for SEM1P1 (if available)

No data available for Orthologs for SEM1P1 Gene

Paralogs for SEM1P1 Gene

No data available for Paralogs for SEM1P1 Gene

Variants for SEM1P1 Gene

Relevant External Links for SEM1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SEM1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SEM1P1 Gene

Disorders for SEM1P1 Gene

MalaCards: The human disease database

(2) MalaCards diseases for SEM1P1 Gene - From: GeneCards

Disorder Aliases PubMed IDs
split foot
split hand foot malformation
  • ectrodactyly
- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with SEM1P1: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for SEM1P1 Gene

Publications for SEM1P1 Gene

  1. Cloning of a DSS1 pseudogene (DSS1P1) and mapping to human chromosome band 5q14. (PMID: 9060422) Crackower M.A. … Tsui L.C. (Mamm. Genome 1997) 2 3 64

Products for SEM1P1 Gene

Sources for SEM1P1 Gene

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