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Aliases for SELENOWP1 Gene

Aliases for SELENOWP1 Gene

  • Selenoprotein W Pseudogene 1 2 3 5
  • Selenoprotein W, 1 Pseudogene 2 3
  • SEPW1P 3

External Ids for SELENOWP1 Gene

Previous HGNC Symbols for SELENOWP1 Gene

  • SEPW1P

Summaries for SELENOWP1 Gene

GeneCards Summary for SELENOWP1 Gene

SELENOWP1 (Selenoprotein W Pseudogene 1) is a Pseudogene.

Additional gene information for SELENOWP1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SELENOWP1 Gene

Genomics for SELENOWP1 Gene

GeneHancer (GH) Regulatory Elements for SELENOWP1 Gene

Promoters and enhancers for SELENOWP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I031094 Enhancer 0.5 ENCODE 550.8 +0.5 493 0.9 GATAD2A ATF4 HMG20A PRDM10 ZNF644 RAD21 GC01P031093 SELENOWP1
GH01I031098 Enhancer 1.1 Ensembl ENCODE 0.8 -4.6 -4615 3.1 YY1 ZNF766 ATF7 RXRA SP5 REST PPARG ZNF592 KAT8 MEF2D SELENOWP1 GC01M031109
GH01I031101 Enhancer 0.8 Ensembl ENCODE 0.4 -7.1 -7125 1.6 BCOR ELF3 ZNF280D HLF USF2 ZC3H11A CEBPB NR2F2 GABPA OSR2 SNRNP40 ENSG00000229447 KHDRBS1 GC01M031109 SELENOWP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SELENOWP1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for SELENOWP1 Gene

Genomic Locations for SELENOWP1 Gene
chr1:31,094,571-31,095,638
(GRCh38/hg38)
Size:
1,068 bases
Orientation:
Minus strand
chr1:31,567,418-31,568,485
(GRCh37/hg19)

Genomic View for SELENOWP1 Gene

Genes around SELENOWP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SELENOWP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SELENOWP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SELENOWP1 Gene

Proteins for SELENOWP1 Gene

Post-translational modifications for SELENOWP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SELENOWP1 Gene

Domains & Families for SELENOWP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SELENOWP1 Gene

Function for SELENOWP1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SELENOWP1 Gene

Localization for SELENOWP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SELENOWP1 Gene

Pathways & Interactions for SELENOWP1 Gene

SuperPathways for SELENOWP1 Gene

No Data Available

Interacting Proteins for SELENOWP1 Gene

Gene Ontology (GO) - Biological Process for SELENOWP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SELENOWP1 Gene

Drugs & Compounds for SELENOWP1 Gene

No Compound Related Data Available

Transcripts for SELENOWP1 Gene

mRNA/cDNA for SELENOWP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SELENOWP1 Gene

No ASD Table

Relevant External Links for SELENOWP1 Gene

GeneLoc Exon Structure for
SELENOWP1
ECgene alternative splicing isoforms for
SELENOWP1

Expression for SELENOWP1 Gene

NURSA nuclear receptor signaling pathways regulating expression of SELENOWP1 Gene:

SELENOWP1
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SELENOWP1 Gene

Orthologs for SELENOWP1 Gene

Evolution for SELENOWP1 Gene

ENSEMBL:
Gene Tree for SELENOWP1 (if available)
TreeFam:
Gene Tree for SELENOWP1 (if available)

No data available for Orthologs for SELENOWP1 Gene

Paralogs for SELENOWP1 Gene

No data available for Paralogs for SELENOWP1 Gene

Variants for SELENOWP1 Gene

Additional Variant Information for SELENOWP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SELENOWP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SELENOWP1 Gene

Disorders for SELENOWP1 Gene

No disorders were found for SELENOWP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SELENOWP1 Gene

Publications for SELENOWP1 Gene

  1. Gene structure and tissue expression of human selenoprotein W, SEPW1, and identification of a retroprocessed pseudogene, SEPW1P. (PMID: 12818432) Bellingham J … Gregory-Evans CY (Biochimica et biophysica acta 2003) 2 3 22 58

Products for SELENOWP1 Gene

Sources for SELENOWP1 Gene

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