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Aliases for SEC62-AS1 Gene

Subcategory (RNA class) for SEC62-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for SEC62-AS1 Gene

  • SEC62 Antisense RNA 1 2 3 5
  • SEC62 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for SEC62-AS1 Gene

Previous GeneCards Identifiers for SEC62-AS1 Gene

  • GC00U933520
  • GC03M169697

Summaries for SEC62-AS1 Gene

GeneCards Summary for SEC62-AS1 Gene

SEC62-AS1 (SEC62 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SEC62-AS1 Gene

Genomics for SEC62-AS1 Gene

Regulatory Elements for SEC62-AS1 Gene

Enhancers for SEC62-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03F169763 0.4 ENCODE 32 +221.2 221233 2.9 HDGF ARNT CREB3L1 ARID4B SIN3A DMAP1 ZNF2 YY1 CBX5 ZNF143 SEC62-AS1 ENSG00000239628 RPL22P1 PRKCI LRRC34 ENSG00000277925 PIR60567
GH03F169771 1.2 ENCODE 25.7 +212.6 212572 3.2 HDGF PKNOX1 ARNT CREB3L1 MLX WRNIP1 ZFP64 ARID4B SIN3A FEZF1 SEC62-AS1 ENSG00000270096 PRKCI CLDN11 LRRC34 PIR36992 ENSG00000269984
GH03F169768 0.4 ENCODE 24 +216.2 216201 1.4 PKNOX1 SIN3A GLI4 DMAP1 ZNF48 BRCA1 ZNF2 YY1 GTF3C2 GLIS2 SEC62-AS1 LRRC34 ENSG00000269889 GC03M169768 MYNN
GH03F169657 1 FANTOM5 Ensembl ENCODE 23.6 +322.0 322048 12.4 PKNOX1 ARID4B FEZF1 DMAP1 ZNF2 ZNF263 SP3 REST SMARCB1 KAT8 SEC62-AS1 ENSG00000239628 ENSG00000270096 PRKCI ACTRT3 MECOM ENSG00000242795
GH03F170739 0.5 Ensembl ENCODE 21.3 -755.8 -755821 3.2 JUN MAX FEZF1 RFX5 FOXK2 ZNF26 PRDM10 RCOR1 ZNF548 FOS SEC62-AS1 SLC7A14 LOC101928583 ENSG00000239739 LOC105374211
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around SEC62-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for SEC62-AS1 Gene

169,978,536 bp from pter
169,985,715 bp from pter
7,180 bases
Minus strand

Genomic View for SEC62-AS1 Gene

Genes around SEC62-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SEC62-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SEC62-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for SEC62-AS1 Gene

Proteins for SEC62-AS1 Gene

Post-translational modifications for SEC62-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SEC62-AS1 Gene

Domains & Families for SEC62-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SEC62-AS1 Gene

Function for SEC62-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SEC62-AS1 Gene

Localization for SEC62-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SEC62-AS1 Gene

Pathways & Interactions for SEC62-AS1 Gene

SuperPathways for SEC62-AS1 Gene

No Data Available

Interacting Proteins for SEC62-AS1 Gene

Gene Ontology (GO) - Biological Process for SEC62-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for SEC62-AS1 Gene

Transcripts for SEC62-AS1 Gene

mRNA/cDNA for SEC62-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SEC62-AS1 Gene

No ASD Table

Relevant External Links for SEC62-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SEC62-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SEC62-AS1 Gene

genes like me logo Genes that share expression patterns with SEC62-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for SEC62-AS1 Gene

Orthologs for SEC62-AS1 Gene

Evolution for SEC62-AS1 Gene

Gene Tree for SEC62-AS1 (if available)
Gene Tree for SEC62-AS1 (if available)

No data available for Orthologs for SEC62-AS1 Gene

Paralogs for SEC62-AS1 Gene

No data available for Paralogs for SEC62-AS1 Gene

Variants for SEC62-AS1 Gene

Relevant External Links for SEC62-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SEC62-AS1 Gene

Disorders for SEC62-AS1 Gene

No disorders were found for SEC62-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SEC62-AS1 Gene

Publications for SEC62-AS1 Gene

  1. Insight into hepatocellular carcinogenesis at transcriptome level by comparing gene expression profiles of hepatocellular carcinoma with those of corresponding noncancerous liver. (PMID: 11752456) Xu X.R. … Han Z.G. (Proc. Natl. Acad. Sci. U.S.A. 2001) 3 64

Products for SEC62-AS1 Gene

Sources for SEC62-AS1 Gene

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