Free for academic non-profit institutions. Other users need a Commercial license

Aliases for SEC14L6 Gene

Aliases for SEC14L6 Gene

  • SEC14-Like 6 (S. Cerevisiae) 2 3

External Ids for SEC14L6 Gene

Summaries for SEC14L6 Gene

GeneCards Summary for SEC14L6 Gene

SEC14L6 (SEC14-Like 6 (S. Cerevisiae)) is a Protein Coding gene. GO annotations related to this gene include transporter activity. An important paralog of this gene is ENSG00000249590.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SEC14L6 Gene

Genomics for SEC14L6 Gene

Genomic Location for SEC14L6 Gene

Start:
30,522,799 bp from pter
End:
30,546,682 bp from pter
Size:
23,884 bases
Orientation:
Minus strand

Genomic View for SEC14L6 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SEC14L6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SEC14L6 Gene

No data available for Regulatory Elements for SEC14L6 Gene

Proteins for SEC14L6 Gene

  • Protein details for SEC14L6 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    B5MCN3-S14L6_HUMAN
    Recommended name:
    Putative SEC14-like protein 6
    Protein Accession:
    B5MCN3
    Secondary Accessions:

    Protein attributes for SEC14L6 Gene

    Size:
    397 amino acids
    Molecular mass:
    45364 Da
    Quaternary structure:
    No Data Available

neXtProt entry for SEC14L6 Gene

Proteomics data for SEC14L6 Gene at MOPED

Post-translational modifications for SEC14L6 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for SEC14L6 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for SEC14L6 Gene

Domains for SEC14L6 Gene

Protein Domains for SEC14L6 Gene

UniProtKB/Swiss-Prot:

S14L6_HUMAN
Domain:
  • Contains 1 CRAL-TRIO domain.:
    • B5MCN3
  • Contains 1 GOLD domain.:
    • B5MCN3
genes like me logo Genes that share domains with SEC14L6: view

No data available for Gene Families for SEC14L6 Gene

Function for SEC14L6 Gene

Gene Ontology (GO) - Molecular Function for SEC14L6 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005215 transporter activity IEA --
genes like me logo Genes that share ontologies with SEC14L6: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SEC14L6 Gene

Localization for SEC14L6 Gene

Gene Ontology (GO) - Cellular Components for SEC14L6 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005622 intracellular IEA --
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with SEC14L6: view

Pathways for SEC14L6 Gene

SuperPathways for SEC14L6 Gene

No Data Available

Interacting Proteins for SEC14L6 Gene

Gene Ontology (GO) - Biological Process for SEC14L6 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006810 transport IEA --
genes like me logo Genes that share ontologies with SEC14L6: view

No data available for Pathways by source for SEC14L6 Gene

Transcripts for SEC14L6 Gene

mRNA/cDNA for SEC14L6 Gene

(6) REFSEQ mRNAs :
(0) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SEC14L6 Gene

SEC14-like 6 (S. cerevisiae):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for SEC14L6 Gene

No ASD Table

Relevant External Links for SEC14L6 Gene

GeneLoc Exon Structure for
SEC14L6
ECgene alternative splicing isoforms for
SEC14L6

Expression for SEC14L6 Gene

mRNA expression in normal human tissues for SEC14L6 Gene

mRNA differential expression in normal tissues according to GTEx for SEC14L6 Gene

This gene is overexpressed in Kidney - Cortex (4.5).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for SEC14L6 Gene

SOURCE GeneReport for Unigene cluster for SEC14L6 Gene Hs.505605

genes like me logo Genes that share expressions with SEC14L6: view

Orthologs for SEC14L6 Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for SEC14L6 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SEC14L6 36
  • 98.24 (n)
  • 97.23 (a)
SEC14L6 37
  • 97 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SEC14L6 36
  • 85.23 (n)
  • 80.51 (a)
oppossum
(Monodelphis domestica)
Mammalia -- 37
  • 62 (a)
OneToMany
chicken
(Gallus gallus)
Aves -- 37
  • 56 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia -- 37
  • 59 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii FP016199.1 37
  • 51 (a)
ManyToMany
si:ch211-89f7.1 37
  • 57 (a)
ManyToMany
fruit fly
(Drosophila melanogaster)
Insecta CG13893 37
  • 28 (a)
OneToMany
worm
(Caenorhabditis elegans)
Secernentea cgr-1 37
  • 21 (a)
ManyToMany
ctg-1 37
  • 26 (a)
ManyToMany
ctg-2 37
  • 23 (a)
ManyToMany
F18A11.2 37
  • 17 (a)
ManyToMany
F20G2.3 37
  • 24 (a)
ManyToMany
F28H7.8 37
  • 21 (a)
ManyToMany
H41C03.1 37
  • 21 (a)
ManyToMany
R03A10.5 37
  • 20 (a)
ManyToMany
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes -- 37
  • 23 (a)
ManyToMany
SEC14 37
  • 25 (a)
ManyToMany
Species with no ortholog for SEC14L6:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)

Evolution for SEC14L6 Gene

ENSEMBL:
Gene Tree for SEC14L6 (if available)
TreeFam:
Gene Tree for SEC14L6 (if available)

Paralogs for SEC14L6 Gene

Paralogs for SEC14L6 Gene

Selected SIMAP similar genes for SEC14L6 Gene using alignment to 2 proteins:

genes like me logo Genes that share paralogs with SEC14L6: view

Variants for SEC14L6 Gene

Sequence variations from dbSNP and Humsavar for SEC14L6 Gene

SNP ID Clin Chr 22 pos Sequence Context AA Info Type MAF
rs764217 -- 30,537,613(-) tcgct(C/G)gctct intron-variant
rs764218 -- 30,537,574(-) caggc(C/G/T)gacat intron-variant
rs1057118 -- 30,542,962(+) CTGAC(A/G)TGGAG intron-variant, upstream-variant-2KB
rs1057120 -- 30,542,963(+) TGACG(C/T)GGAGT intron-variant, upstream-variant-2KB
rs1107844 -- 30,536,686(+) cctaa(C/T)tgggt intron-variant

Structural Variations from Database of Genomic Variants (DGV) for SEC14L6 Gene

Variant ID Type Subtype PubMed ID
nsv829171 CNV Loss 20364138

Relevant External Links for SEC14L6 Gene

HapMap Linkage Disequilibrium report
SEC14L6

Disorders for SEC14L6 Gene

No disorders were found for SEC14L6 Gene.

No data available for UniProtKB/Swiss-Prot for SEC14L6 Gene

Publications for SEC14L6 Gene

  1. Transcriptome characterization elucidates signaling networks that control human ES cell growth and differentiation. (PMID: 15146197) Brandenberger R. … Stanton L.W. (Nat. Biotechnol. 2004) 3
  2. The DNA sequence of human chromosome 22. (PMID: 10591208) Dunham I. … Wright H. (Nature 1999) 4

Products for SEC14L6 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate SEC14L6
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for SEC14L6
    • Block miRNA regulation of SEC14L6 using miScript Target Protectors

    Sources for SEC14L6 Gene

    Back to Top

    Content