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Aliases for SEC14L6 Gene

Aliases for SEC14L6 Gene

  • SEC14 Like Lipid Binding 6 2 3
  • SEC14-Like Lipid Binding 6 2 5
  • SEC14-Like 6 (S. Cerevisiae) 2
  • SEC14-Like 6 2

External Ids for SEC14L6 Gene

Previous GeneCards Identifiers for SEC14L6 Gene

  • GC22M030921

Summaries for SEC14L6 Gene

GeneCards Summary for SEC14L6 Gene

SEC14L6 (SEC14 Like Lipid Binding 6) is a Protein Coding gene. GO annotations related to this gene include transporter activity. An important paralog of this gene is ENSG00000249590.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SEC14L6 Gene

Genomics for SEC14L6 Gene

Genomic Location for SEC14L6 Gene

Chromosome:
22
Start:
30,522,799 bp from pter
End:
30,546,717 bp from pter
Size:
23,919 bases
Orientation:
Minus strand

Genomic View for SEC14L6 Gene

Genes around SEC14L6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SEC14L6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SEC14L6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SEC14L6 Gene

No data available for Regulatory Elements for SEC14L6 Gene

Proteins for SEC14L6 Gene

  • Protein details for SEC14L6 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    B5MCN3-S14L6_HUMAN
    Recommended name:
    Putative SEC14-like protein 6
    Protein Accession:
    B5MCN3

    Protein attributes for SEC14L6 Gene

    Size:
    397 amino acids
    Molecular mass:
    45364 Da
    Quaternary structure:
    No Data Available

neXtProt entry for SEC14L6 Gene

Proteomics data for SEC14L6 Gene at MOPED

Post-translational modifications for SEC14L6 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for SEC14L6 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for SEC14L6 Gene

Domains & Families for SEC14L6 Gene

Gene Families for SEC14L6 Gene

Protein Domains for SEC14L6 Gene

Suggested Antigen Peptide Sequences for SEC14L6 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

B5MCN3

UniProtKB/Swiss-Prot:

S14L6_HUMAN :
  • Contains 1 CRAL-TRIO domain.
Domain:
  • Contains 1 CRAL-TRIO domain.
  • Contains 1 GOLD domain.
genes like me logo Genes that share domains with SEC14L6: view

Function for SEC14L6 Gene

Phenotypes for SEC14L6 Gene

GenomeRNAi human phenotypes for SEC14L6:
genes like me logo Genes that share phenotypes with SEC14L6: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for SEC14L6 Gene

Localization for SEC14L6 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for SEC14L6 Gene COMPARTMENTS Subcellular localization image for SEC14L6 gene
Compartment Confidence
cytosol 3
nucleus 2

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for SEC14L6 Gene

Pathways & Interactions for SEC14L6 Gene

SuperPathways for SEC14L6 Gene

No Data Available

Interacting Proteins for SEC14L6 Gene

Gene Ontology (GO) - Biological Process for SEC14L6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SEC14L6 Gene

Drugs & Compounds for SEC14L6 Gene

No Compound Related Data Available

Transcripts for SEC14L6 Gene

mRNA/cDNA for SEC14L6 Gene

(6) REFSEQ mRNAs :
(0) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SEC14L6 Gene

SEC14-like 6 (S. cerevisiae):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for SEC14L6 Gene

No ASD Table

Relevant External Links for SEC14L6 Gene

GeneLoc Exon Structure for
SEC14L6
ECgene alternative splicing isoforms for
SEC14L6

Expression for SEC14L6 Gene

mRNA expression in normal human tissues for SEC14L6 Gene

mRNA differential expression in normal tissues according to GTEx for SEC14L6 Gene

This gene is overexpressed in Kidney - Cortex (x4.5).

Protein differential expression in normal tissues from HIPED for SEC14L6 Gene

This gene is overexpressed in Adipocyte (68.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, and MOPED for SEC14L6 Gene



SOURCE GeneReport for Unigene cluster for SEC14L6 Gene Hs.505605

genes like me logo Genes that share expression patterns with SEC14L6: view

Protein tissue co-expression partners for SEC14L6 Gene

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for SEC14L6 Gene

Orthologs for SEC14L6 Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for SEC14L6 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia SEC14L6 35
  • 85.23 (n)
  • 80.51 (a)
chimpanzee
(Pan troglodytes)
Mammalia SEC14L6 35
  • 98.24 (n)
  • 97.23 (a)
SEC14L6 36
  • 97 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia -- 36
  • 62 (a)
OneToMany
chicken
(Gallus gallus)
Aves -- 36
  • 56 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia -- 36
  • 59 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii FP016199.1 36
  • 51 (a)
ManyToMany
si:ch211-89f7.1 36
  • 57 (a)
ManyToMany
fruit fly
(Drosophila melanogaster)
Insecta CG13893 36
  • 28 (a)
OneToMany
worm
(Caenorhabditis elegans)
Secernentea cgr-1 36
  • 21 (a)
ManyToMany
ctg-1 36
  • 26 (a)
ManyToMany
ctg-2 36
  • 23 (a)
ManyToMany
F18A11.2 36
  • 17 (a)
ManyToMany
F20G2.3 36
  • 24 (a)
ManyToMany
F28H7.8 36
  • 21 (a)
ManyToMany
H41C03.1 36
  • 21 (a)
ManyToMany
R03A10.5 36
  • 20 (a)
ManyToMany
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes -- 36
  • 23 (a)
ManyToMany
SEC14 36
  • 25 (a)
ManyToMany
Species with no ortholog for SEC14L6:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)

Evolution for SEC14L6 Gene

ENSEMBL:
Gene Tree for SEC14L6 (if available)
TreeFam:
Gene Tree for SEC14L6 (if available)

Paralogs for SEC14L6 Gene

Paralogs for SEC14L6 Gene

(4) SIMAP similar genes for SEC14L6 Gene using alignment to 2 proteins:

genes like me logo Genes that share paralogs with SEC14L6: view

Variants for SEC14L6 Gene

Sequence variations from dbSNP and Humsavar for SEC14L6 Gene

SNP ID Clin Chr 22 pos Sequence Context AA Info Type
rs764217 -- 30,537,613(-) tcgct(C/G)gctct intron-variant
rs764218 -- 30,537,574(-) caggc(C/G/T)gacat intron-variant
rs2079311 -- 30,536,834(+) agcct(C/T)gctaa intron-variant
rs2079312 -- 30,538,348(+) aaaaa(A/G)aaaga intron-variant
rs1057118 -- 30,542,962(+) CTGAC(A/G)TGGAG intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for SEC14L6 Gene

Variant ID Type Subtype PubMed ID
nsv829171 CNV Loss 20364138

Variation tolerance for SEC14L6 Gene

Gene Damage Index Score: 3.36; 53.85% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for SEC14L6 Gene

HapMap Linkage Disequilibrium report
SEC14L6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for SEC14L6 Gene

Disorders for SEC14L6 Gene

Relevant External Links for SEC14L6

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SEC14L6

No disorders were found for SEC14L6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SEC14L6 Gene

Publications for SEC14L6 Gene

  1. The lipid-binding SEC14 domain. (PMID: 17428729) Saito K. … Mustelin T. (Biochim. Biophys. Acta 2007) 2 3 67
  2. Transcriptome characterization elucidates signaling networks that control human ES cell growth and differentiation. (PMID: 15146197) Brandenberger R. … Stanton L.W. (Nat. Biotechnol. 2004) 3

Products for SEC14L6 Gene

Sources for SEC14L6 Gene

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