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Aliases for SEC14L1P1 Gene

Aliases for SEC14L1P1 Gene

  • SEC14 Like 1 Pseudogene 1 2 3 5
  • SEC14-Like 1 Pseudogene 1 2

External Ids for SEC14L1P1 Gene

Summaries for SEC14L1P1 Gene

GeneCards Summary for SEC14L1P1 Gene

SEC14L1P1 (SEC14 Like 1 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SEC14L1P1 Gene

Genomics for SEC14L1P1 Gene

Regulatory Elements for SEC14L1P1 Gene

Enhancers for SEC14L1P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11G043311 1.1 ENCODE 16.1 -584.8 -584765 2.4 HDGF PKNOX1 CREB3L1 ARID4B SIN3A DMAP1 ZNF2 YY1 CBX5 ZNF207 ENSG00000254907 SEC14L1P1 ALKBH3 LOC105376644 ENSG00000255165 RN7SKP287 ACCS EXT2 API5 HSD17B12
GH11G043880 1.1 ENCODE 12.4 -16.3 -16336 1.6 HDGF PKNOX1 CREB3L1 ARNT ZFP64 WRNIP1 ARID4B SIN3A DMAP1 ZNF2 ALKBH3 SEC14L1P1 EXT2 RN7SKP287
GH11G044817 0.8 ENCODE dbSUPER 16.3 +920.7 920735 1.5 SMARCA4 NFYB ZNF701 JUN FOS ZIC2 NR2F2 EXT2 SEC14L1P1 ACCS ENSG00000255165 ALKBH3 TSPAN18 PIR54519 GC11M044917
GH11G043357 1.1 ENCODE 11.6 -537.9 -537888 3.0 HDGF PKNOX1 CREB3L1 AGO1 WRNIP1 ARID4B SIN3A DMAP1 YY1 ZNF766 SEC14L1P1 ALKBH3 ACCS EXT2 API5 TTC17 ENSG00000254907 ENSG00000255340
GH11G044065 1.1 ENCODE 11.6 +169.1 169105 2.2 HDGF PKNOX1 CREB3L1 AGO1 SIN3A ZNF2 YY1 CBX5 ZNF143 ZNF207 ACCS EXT2 SEC14L1P1 ALKBH3 C11orf96 ALKBH3-AS1 ENSG00000255165
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SEC14L1P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for SEC14L1P1 Gene

Chromosome:
11
Start:
43,897,303 bp from pter
End:
43,899,888 bp from pter
Size:
2,586 bases
Orientation:
Plus strand

Genomic View for SEC14L1P1 Gene

Genes around SEC14L1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SEC14L1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SEC14L1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SEC14L1P1 Gene

Proteins for SEC14L1P1 Gene

Post-translational modifications for SEC14L1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SEC14L1P1 Gene

Domains & Families for SEC14L1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SEC14L1P1 Gene

Function for SEC14L1P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SEC14L1P1 Gene

Localization for SEC14L1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SEC14L1P1 Gene

Pathways & Interactions for SEC14L1P1 Gene

SuperPathways for SEC14L1P1 Gene

No Data Available

Interacting Proteins for SEC14L1P1 Gene

Gene Ontology (GO) - Biological Process for SEC14L1P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SEC14L1P1 Gene

Transcripts for SEC14L1P1 Gene

mRNA/cDNA for SEC14L1P1 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SEC14L1P1 Gene

SEC14-like 1 pseudogene 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for SEC14L1P1 Gene

No ASD Table

Relevant External Links for SEC14L1P1 Gene

GeneLoc Exon Structure for
SEC14L1P1
ECgene alternative splicing isoforms for
SEC14L1P1

Expression for SEC14L1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SEC14L1P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of SEC14L1P1 Gene:

SEC14L1P1

SOURCE GeneReport for Unigene cluster for SEC14L1P1 Gene:

Hs.368920
genes like me logo Genes that share expression patterns with SEC14L1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SEC14L1P1 Gene

Orthologs for SEC14L1P1 Gene

Evolution for SEC14L1P1 Gene

ENSEMBL:
Gene Tree for SEC14L1P1 (if available)
TreeFam:
Gene Tree for SEC14L1P1 (if available)

No data available for Orthologs for SEC14L1P1 Gene

Paralogs for SEC14L1P1 Gene

No data available for Paralogs for SEC14L1P1 Gene

Variants for SEC14L1P1 Gene

Sequence variations from dbSNP and Humsavar for SEC14L1P1 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type
rs1000576453 -- 43,896,290(+) ACACA(-/CACACACACACG)TATAT intron-variant, upstream-variant-2KB
rs1000973090 -- 43,898,771(+) CGCTG(A/G)TTAGT intron-variant, nc-transcript-variant
rs1001874517 -- 43,899,983(+) AAGCC(A/C)ATTTC intron-variant, downstream-variant-500B
rs1003394201 -- 43,898,134(+) ATCCC(A/T)GATAA intron-variant, nc-transcript-variant
rs1005151513 -- 43,898,527(+) AGATA(C/T)GTTCT intron-variant, nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for SEC14L1P1 Gene

Variant ID Type Subtype PubMed ID
nsv467867 CNV gain 19166990
nsv554171 CNV gain 21841781
nsv832138 CNV gain 17160897

Relevant External Links for SEC14L1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SEC14L1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SEC14L1P1 Gene

Disorders for SEC14L1P1 Gene

Relevant External Links for SEC14L1P1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SEC14L1P1

No disorders were found for SEC14L1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SEC14L1P1 Gene

Publications for SEC14L1P1 Gene

No publications were found for SEC14L1P1 Gene.

Products for SEC14L1P1 Gene

Sources for SEC14L1P1 Gene

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