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Aliases for SDR16C6P Gene

Aliases for SDR16C6P Gene

  • Short Chain Dehydrogenase/Reductase Family 16C, Member 6, Pseudogene 2 3
  • Short Chain Dehydrogenase/Reductase Family 16C, Member 6 2
  • SDR16C6 3

External Ids for SDR16C6P Gene

Previous HGNC Symbols for SDR16C6P Gene

  • SDR16C6

Previous GeneCards Identifiers for SDR16C6P Gene

  • GC08M057286

Summaries for SDR16C6P Gene

GeneCards Summary for SDR16C6P Gene

SDR16C6P (Short Chain Dehydrogenase/Reductase Family 16C, Member 6, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SDR16C6P Gene

Genomics for SDR16C6P Gene

Genomic Location for SDR16C6P Gene

56,373,064 bp from pter
56,395,365 bp from pter
22,302 bases
Minus strand

Genomic View for SDR16C6P Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SDR16C6P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SDR16C6P Gene

No data available for Regulatory Elements for SDR16C6P Gene

Proteins for SDR16C6P Gene

Post-translational modifications for SDR16C6P Gene

No Post-translational modifications

No data available for DME Specific Peptides for SDR16C6P Gene

Domains for SDR16C6P Gene

Gene Families for SDR16C6P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SDR16C6P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SDR16C6P Gene

Function for SDR16C6P Gene

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for SDR16C6P

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SDR16C6P Gene

Localization for SDR16C6P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SDR16C6P Gene

Pathways for SDR16C6P Gene

SuperPathways for SDR16C6P Gene

No Data Available

Interacting Proteins for SDR16C6P Gene

Gene Ontology (GO) - Biological Process for SDR16C6P Gene


No data available for Pathways by source for SDR16C6P Gene

Transcripts for SDR16C6P Gene

mRNA/cDNA for SDR16C6P Gene

(1) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(103) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SDR16C6P Gene

Short chain dehydrogenase/reductase family 16C, member 6, pseudogene:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for SDR16C6P

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for SDR16C6P Gene

No ASD Table

Relevant External Links for SDR16C6P Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SDR16C6P Gene

mRNA expression in normal human tissues for SDR16C6P Gene

mRNA differential expression in normal tissues according to GTEx for SDR16C6P Gene

This gene is overexpressed in Testis (47.6).

SOURCE GeneReport for Unigene cluster for SDR16C6P Gene Hs.632065

genes like me logo Genes that share expressions with SDR16C6P: view

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for SDR16C6P Gene

Orthologs for SDR16C6P Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for SDR16C6P Gene

Organism Taxonomy Gene Similarity Type Details
(Mus musculus)
Mammalia Sdr16c6 16
Species with no ortholog for SDR16C6P:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SDR16C6P Gene

Gene Tree for SDR16C6P (if available)
Gene Tree for SDR16C6P (if available)

Paralogs for SDR16C6P Gene

No data available for Paralogs for SDR16C6P Gene

Variants for SDR16C6P Gene

Sequence variations from dbSNP and Humsavar for SDR16C6P Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type MAF
rs531638687 -- 56,376,139(+) TTACC(-/A)AAAAA intron-variant
rs531689634 -- 56,381,428(+) ACACT(C/T)GTCCT intron-variant
rs531701302 -- 56,382,016(+) GCTTT(C/T)AACTT nc-transcript-variant
rs531625716 -- 56,378,254(+) CAGGC(A/G)TGCAC intron-variant
rs531509978 -- 56,391,344(+) GTGAC(-/A)ATTGA upstream-variant-2KB

Relevant External Links for SDR16C6P Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for SDR16C6P Gene

Disorders for SDR16C6P Gene

No disorders were found for SDR16C6P Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for SDR16C6P Gene

Publications for SDR16C6P Gene

  1. The SDR (short-chain dehydrogenase/reductase and related enzymes) nomenclature initiative. (PMID: 19027726) Persson B. … Oppermann U. (Chem. Biol. Interact. 2009) 2 3
  2. Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. (PMID: 23251661) Comuzzie A.G. … Butte N.F. (PLoS ONE 2012) 3
  3. DNA sequence and analysis of human chromosome 8. (PMID: 16421571) Nusbaum C. … Lander E.S. (Nature 2006) 3

Products for SDR16C6P Gene

Sources for SDR16C6P Gene

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