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Aliases for SDHDP4 Gene

Aliases for SDHDP4 Gene

  • Succinate Dehydrogenase Complex Subunit D Pseudogene 4 2 3
  • Succinate Dehydrogenase Complex, Subunit D, Integral Membrane Protein Pseudogene 4 2
  • Succinate Dehydrogenase Complex Subunit D, Integral Membrane Protein Pseudogene 4 2
  • RP11-852E15.1 5

External Ids for SDHDP4 Gene

Previous GeneCards Identifiers for SDHDP4 Gene

  • GC03U990147

Summaries for SDHDP4 Gene

GeneCards Summary for SDHDP4 Gene

SDHDP4 (Succinate Dehydrogenase Complex Subunit D Pseudogene 4) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SDHDP4 Gene

Genomics for SDHDP4 Gene

Regulatory Elements for SDHDP4 Gene

Enhancers for SDHDP4 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03G045687 1.7 Ensembl ENCODE dbSUPER 8.9 +192.2 192206 8.1 CREB3L1 ZFP64 FEZF1 DMAP1 YY1 ZNF143 SP3 NFYC TBX21 SSRP1 SACM1L LIMD1 XCR1 RN7SL145P EXOSC7 LARS2-AS1 ZDHHC3 CCR9 SDHDP4 LIMD1-AS1
GH03G045841 1.3 ENCODE dbSUPER 11.3 +42.2 42170 1.7 PKNOX1 CREB3L1 ARNT ARID4B SIN3A YY1 ZNF766 FOS MXD4 NFYC SDHDP4 CCR9 LZTFL1 CXCR6 LARS2 GC03P045849 PIR58059
GH03G045904 1.1 ENCODE dbSUPER 11.9 -21.2 -21159 1.2 CTCF PKNOX1 MXI1 TBL1XR1 BACH1 EBF1 EED NFE2 RELB IKZF2 SDHDP4 LOC102724297 CXCR6 FYCO1 ENSG00000201635 LZTFL1
GH03G045860 1.1 ENCODE dbSUPER 11.6 +22.7 22717 1.6 TBL1XR1 BMI1 RELB ETV6 IKZF2 CREM SMAD5 JUNB TBX21 ZNF592 SDHDP4 SLC6A20 CCR9 LZTFL1 LIMD1 LARS2 GC03P045849 GC03M045883
GH03G045816 1.2 Ensembl ENCODE 10 +66.2 66199 3.8 PKNOX1 ARNT FEZF1 TCF12 GATA2 FOS JUNB TBX21 ZNF592 ZNF579 LZTFL1 CCR9 SDHDP4 SLC6A20 CXCR6 PIR58059
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SDHDP4 on UCSC Golden Path with GeneCards custom track

Genomic Location for SDHDP4 Gene

Chromosome:
3
Start:
45,882,827 bp from pter
End:
45,884,125 bp from pter
Size:
1,299 bases
Orientation:
Minus strand

Genomic View for SDHDP4 Gene

Genes around SDHDP4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SDHDP4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SDHDP4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SDHDP4 Gene

Proteins for SDHDP4 Gene

Post-translational modifications for SDHDP4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SDHDP4 Gene

Domains & Families for SDHDP4 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SDHDP4 Gene

Function for SDHDP4 Gene

Molecular function for SDHDP4 Gene

GENATLAS Biochemistry:
succinate dehydrogenase complex, subunit D, integral membrane protein pseudogene 4

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SDHDP4 Gene

Localization for SDHDP4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SDHDP4 Gene

Pathways & Interactions for SDHDP4 Gene

SuperPathways for SDHDP4 Gene

No Data Available

Interacting Proteins for SDHDP4 Gene

Gene Ontology (GO) - Biological Process for SDHDP4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SDHDP4 Gene

Transcripts for SDHDP4 Gene

mRNA/cDNA for SDHDP4 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SDHDP4 Gene

No ASD Table

Relevant External Links for SDHDP4 Gene

GeneLoc Exon Structure for
SDHDP4
ECgene alternative splicing isoforms for
SDHDP4

Expression for SDHDP4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SDHDP4 Gene

NURSA nuclear receptor signaling pathways regulating expression of SDHDP4 Gene:

SDHDP4
genes like me logo Genes that share expression patterns with SDHDP4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SDHDP4 Gene

Orthologs for SDHDP4 Gene

Evolution for SDHDP4 Gene

ENSEMBL:
Gene Tree for SDHDP4 (if available)
TreeFam:
Gene Tree for SDHDP4 (if available)

No data available for Orthologs for SDHDP4 Gene

Paralogs for SDHDP4 Gene

No data available for Paralogs for SDHDP4 Gene

Variants for SDHDP4 Gene

Relevant External Links for SDHDP4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SDHDP4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SDHDP4 Gene

Disorders for SDHDP4 Gene

No disorders were found for SDHDP4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SDHDP4 Gene

Publications for SDHDP4 Gene

  1. Characterization of the human SDHD gene encoding the small subunit of cytochrome b (cybS) in mitochondrial succinate-ubiquinone oxidoreductase. (PMID: 10482792) Hirawake H. … Kita K. (Biochim. Biophys. Acta 1999) 2 3 64

Products for SDHDP4 Gene

Sources for SDHDP4 Gene

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