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Aliases for SDHDP4 Gene

Aliases for SDHDP4 Gene

  • Succinate Dehydrogenase Complex Subunit D Pseudogene 4 2 3
  • Succinate Dehydrogenase Complex, Subunit D, Integral Membrane Protein Pseudogene 4 2
  • Succinate Dehydrogenase Complex Subunit D, Integral Membrane Protein Pseudogene 4 2
  • AC099782.1 5

External Ids for SDHDP4 Gene

Previous GeneCards Identifiers for SDHDP4 Gene

  • GC03U990147

Summaries for SDHDP4 Gene

GeneCards Summary for SDHDP4 Gene

SDHDP4 (Succinate Dehydrogenase Complex Subunit D Pseudogene 4) is a Pseudogene.

Additional gene information for SDHDP4 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SDHDP4 Gene

Genomics for SDHDP4 Gene

GeneHancer (GH) Regulatory Elements for SDHDP4 Gene

Promoters and enhancers for SDHDP4 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I045883 Enhancer 0.7 dbSUPER 550.8 -0.1 -130 1.4 EBF1 BATF IRF4 RELA ATF7 ETV6 BCLAF1 IKZF2 RUNX3 SMAD5 GC03M045883 SDHDP4 SACM1L CCR9 LZTFL1
GH03I045841 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 11.3 +42.2 42170 1.7 PKNOX1 ARNT ARID4B SIN3A IRF4 YY1 ZNF766 E2F8 FOS NFYC LZTFL1 SDHDP4 CCR9 CXCR6 LARS2 GC03P045849 PIR58059
GH03I045687 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE dbSUPER 8.9 +192.2 192229 8.2 ZFP64 FEZF1 DMAP1 IRF4 YY1 ZNF213 E2F8 ZNF143 SP3 NFYC SACM1L ZNF502 LIMD1 RN7SL145P RPS24P8 ZNF501 ZDHHC3 LARS2-AS1 SDHDP4 CCR9
GH03I045860 Enhancer 1 ENCODE dbSUPER 11.6 +22.7 22716 1.6 FOXA2 SMAD1 BMI1 BATF IRF4 ATF7 ETV6 BCLAF1 IKZF2 RUNX3 SDHDP4 SLC6A20 CCR9 LZTFL1 LIMD1 LARS2 GC03P045849 GC03M045883
GH03I045904 Enhancer 0.9 ENCODE dbSUPER 11.9 -21.2 -21159 1.2 PKNOX1 BACH1 EBF1 BATF NFATC1 ATF7 BCLAF1 IKZF2 RUNX3 ZNF687 SDHDP4 LOC102724297 CXCR6 FYCO1 ENSG00000201635 LZTFL1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SDHDP4 on UCSC Golden Path with GeneCards custom track

Genomic Locations for SDHDP4 Gene

Genomic Locations for SDHDP4 Gene
chr3:45,882,827-45,884,125
(GRCh38/hg38)
Size:
1,299 bases
Orientation:
Minus strand
chr3:45,924,319-45,925,617
(GRCh37/hg19)

Genomic View for SDHDP4 Gene

Genes around SDHDP4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SDHDP4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SDHDP4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SDHDP4 Gene

Proteins for SDHDP4 Gene

Post-translational modifications for SDHDP4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SDHDP4 Gene

Domains & Families for SDHDP4 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SDHDP4 Gene

Function for SDHDP4 Gene

Molecular function for SDHDP4 Gene

GENATLAS Biochemistry:
succinate dehydrogenase complex, subunit D, integral membrane protein pseudogene 4

Phenotypes From GWAS Catalog for SDHDP4 Gene

Animal Model Products

Clone Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SDHDP4 Gene

Localization for SDHDP4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SDHDP4 Gene

Pathways & Interactions for SDHDP4 Gene

SuperPathways for SDHDP4 Gene

No Data Available

Interacting Proteins for SDHDP4 Gene

Gene Ontology (GO) - Biological Process for SDHDP4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SDHDP4 Gene

Drugs & Compounds for SDHDP4 Gene

No Compound Related Data Available

Transcripts for SDHDP4 Gene

mRNA/cDNA for SDHDP4 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SDHDP4 Gene

No ASD Table

Relevant External Links for SDHDP4 Gene

GeneLoc Exon Structure for
SDHDP4
ECgene alternative splicing isoforms for
SDHDP4

Expression for SDHDP4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SDHDP4 Gene

NURSA nuclear receptor signaling pathways regulating expression of SDHDP4 Gene:

SDHDP4
genes like me logo Genes that share expression patterns with SDHDP4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SDHDP4 Gene

Orthologs for SDHDP4 Gene

Evolution for SDHDP4 Gene

ENSEMBL:
Gene Tree for SDHDP4 (if available)
TreeFam:
Gene Tree for SDHDP4 (if available)

No data available for Orthologs for SDHDP4 Gene

Paralogs for SDHDP4 Gene

No data available for Paralogs for SDHDP4 Gene

Variants for SDHDP4 Gene

Additional Variant Information for SDHDP4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SDHDP4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SDHDP4 Gene

Disorders for SDHDP4 Gene

No disorders were found for SDHDP4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SDHDP4 Gene

Publications for SDHDP4 Gene

  1. Characterization of the human SDHD gene encoding the small subunit of cytochrome b (cybS) in mitochondrial succinate-ubiquinone oxidoreductase. (PMID: 10482792) Hirawake H … Kita K (Biochimica et biophysica acta 1999) 2 3 58

Products for SDHDP4 Gene

Sources for SDHDP4 Gene

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