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Aliases for SDCCAG3P1 Gene

Aliases for SDCCAG3P1 Gene

  • Serologically Defined Colon Cancer Antigen 3 Pseudogene 1 2 3 5
  • Serologically Defined Colon Cancer Antigen 3-Like 2
  • SDCCAG3L 3

External Ids for SDCCAG3P1 Gene

Previous HGNC Symbols for SDCCAG3P1 Gene

  • SDCCAG3L

Previous GeneCards Identifiers for SDCCAG3P1 Gene

  • GC18M057678

Summaries for SDCCAG3P1 Gene

GeneCards Summary for SDCCAG3P1 Gene

SDCCAG3P1 (Serologically Defined Colon Cancer Antigen 3 Pseudogene 1) is a Pseudogene.

Additional gene information for SDCCAG3P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SDCCAG3P1 Gene

Genomics for SDCCAG3P1 Gene

Regulatory Elements for SDCCAG3P1 Gene

Enhancers for SDCCAG3P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH18H059880 1.5 Ensembl ENCODE dbSUPER 14.7 +128.9 128917 2.5 FOXA2 ZNF493 ZFP64 YY1 TCF12 ZNF121 ZNF302 RUNX3 ZNF202 ZC3H11A SDCCAG3P1 ENSG00000267462 ENSG00000267269 ENSG00000267686 LOC342784 ENSG00000267061 LOC105372155 ENSG00000267215 CPLX4 GC18P059885
GH18H059897 1.3 ENCODE dbSUPER 14.7 +110.7 110671 6.5 HDGF SIN3A FEZF1 FOS SP3 JUNB REST SMARCB1 GLIS1 NBN ENSG00000267462 SDCCAG3P1 ENSG00000267269 ENSG00000267686 LOC342784 ENSG00000267061 LOC105372155 ENSG00000267215 CPLX4 PMAIP1
GH18H059484 1 ENCODE 14.6 +526.0 526040 0.4 PKNOX1 ARNT FEZF1 ZNF2 KLF7 SP3 YY2 TSHZ1 ZNF488 GLIS1 ENSG00000267061 ENSG00000267269 ENSG00000267215 ENSG00000267462 SDCCAG3P1 ENSG00000267686 LOC342784 LOC105372145 LOC105372155 ZNF532
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SDCCAG3P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for SDCCAG3P1 Gene

Genomic Locations for SDCCAG3P1 Gene
chr18:60,009,985-60,011,143
(GRCh38/hg38)
Size:
1,159 bases
Orientation:
Minus strand
chr18:57,677,217-57,678,375
(GRCh37/hg19)

Genomic View for SDCCAG3P1 Gene

Genes around SDCCAG3P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SDCCAG3P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SDCCAG3P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SDCCAG3P1 Gene

Proteins for SDCCAG3P1 Gene

Post-translational modifications for SDCCAG3P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SDCCAG3P1 Gene

Domains & Families for SDCCAG3P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SDCCAG3P1 Gene

Function for SDCCAG3P1 Gene

Phenotypes From GWAS Catalog for SDCCAG3P1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SDCCAG3P1 Gene

Localization for SDCCAG3P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SDCCAG3P1 Gene

Pathways & Interactions for SDCCAG3P1 Gene

SuperPathways for SDCCAG3P1 Gene

No Data Available

Interacting Proteins for SDCCAG3P1 Gene

Gene Ontology (GO) - Biological Process for SDCCAG3P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SDCCAG3P1 Gene

Drugs & Compounds for SDCCAG3P1 Gene

No Compound Related Data Available

Transcripts for SDCCAG3P1 Gene

mRNA/cDNA for SDCCAG3P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SDCCAG3P1 Gene

No ASD Table

Relevant External Links for SDCCAG3P1 Gene

GeneLoc Exon Structure for
SDCCAG3P1
ECgene alternative splicing isoforms for
SDCCAG3P1

Expression for SDCCAG3P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SDCCAG3P1 Gene

mRNA differential expression in normal tissues according to GTEx for SDCCAG3P1 Gene

This gene is overexpressed in Testis (x44.2).

NURSA nuclear receptor signaling pathways regulating expression of SDCCAG3P1 Gene:

SDCCAG3P1
genes like me logo Genes that share expression patterns with SDCCAG3P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SDCCAG3P1 Gene

Orthologs for SDCCAG3P1 Gene

Evolution for SDCCAG3P1 Gene

ENSEMBL:
Gene Tree for SDCCAG3P1 (if available)
TreeFam:
Gene Tree for SDCCAG3P1 (if available)

No data available for Orthologs for SDCCAG3P1 Gene

Paralogs for SDCCAG3P1 Gene

No data available for Paralogs for SDCCAG3P1 Gene

Variants for SDCCAG3P1 Gene

Relevant External Links for SDCCAG3P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SDCCAG3P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SDCCAG3P1 Gene

Disorders for SDCCAG3P1 Gene

Relevant External Links for SDCCAG3P1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SDCCAG3P1

No disorders were found for SDCCAG3P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SDCCAG3P1 Gene

Publications for SDCCAG3P1 Gene

No publications were found for SDCCAG3P1 Gene.

Products for SDCCAG3P1 Gene

Sources for SDCCAG3P1 Gene

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