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Aliases for SDCBPP3 Gene

Aliases for SDCBPP3 Gene

  • Syndecan Binding Protein Pseudogene 3 2 3 5
  • Syndecan Binding Protein (Syntenin) Pseudogene 3 2

External Ids for SDCBPP3 Gene

Previous GeneCards Identifiers for SDCBPP3 Gene

  • GC0XM040751

Summaries for SDCBPP3 Gene

GeneCards Summary for SDCBPP3 Gene

SDCBPP3 (Syndecan Binding Protein Pseudogene 3) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SDCBPP3 Gene

Genomics for SDCBPP3 Gene

Regulatory Elements for SDCBPP3 Gene

Enhancers for SDCBPP3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0XF040890 0.6 FANTOM5 0.8 +0.6 625 0.4 PKNOX1 MTA2 TRIM22 TBX21 CBX5 IKZF1 EED ZNF143 ATP6AP2 USP9X MED14 CXorf38 SDCBPP3 PIR43860
GH0XF040878 1 Ensembl ENCODE 0.4 +12.6 12563 1.9 CTCF FOXA3 ZNF384 TBX21 RAD21 TEAD3 SREBF1 ZNF316 MAFF GATA3 USP9X SDCBPP3 PIR43860
GH0XF040871 0.6 Ensembl ENCODE 0.3 +19.4 19404 2.1 HDGF ZNF146 TBL1XR1 ASH2L BMI1 EBF1 ZIC2 RELA CBX5 EGR1 PIR43860 SDCBPP3
GH0XF040866 1.7 FANTOM5 Ensembl ENCODE 0.3 +24.2 24226 1.3 ESRRA JUN MAX ZNF644 RARA TEAD3 RCOR1 FOS ZNF600 TCF7L2 ATP6AP2 MED14 PIR43860 SDCBPP3
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around SDCBPP3 on UCSC Golden Path with GeneCards custom track

Genomic Location for SDCBPP3 Gene

Chromosome:
X
Start:
40,890,647 bp from pter
End:
40,891,537 bp from pter
Size:
891 bases
Orientation:
Minus strand

Genomic View for SDCBPP3 Gene

Genes around SDCBPP3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SDCBPP3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SDCBPP3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SDCBPP3 Gene

Proteins for SDCBPP3 Gene

Post-translational modifications for SDCBPP3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SDCBPP3 Gene

Domains & Families for SDCBPP3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SDCBPP3 Gene

Function for SDCBPP3 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SDCBPP3 Gene

Localization for SDCBPP3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SDCBPP3 Gene

Pathways & Interactions for SDCBPP3 Gene

SuperPathways for SDCBPP3 Gene

No Data Available

Interacting Proteins for SDCBPP3 Gene

Gene Ontology (GO) - Biological Process for SDCBPP3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SDCBPP3 Gene

Transcripts for SDCBPP3 Gene

mRNA/cDNA for SDCBPP3 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SDCBPP3 Gene

No ASD Table

Relevant External Links for SDCBPP3 Gene

GeneLoc Exon Structure for
SDCBPP3
ECgene alternative splicing isoforms for
SDCBPP3

Expression for SDCBPP3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SDCBPP3 Gene

NURSA nuclear receptor signaling pathways regulating expression of SDCBPP3 Gene:

SDCBPP3
genes like me logo Genes that share expression patterns with SDCBPP3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for SDCBPP3 Gene

Orthologs for SDCBPP3 Gene

Evolution for SDCBPP3 Gene

ENSEMBL:
Gene Tree for SDCBPP3 (if available)
TreeFam:
Gene Tree for SDCBPP3 (if available)

No data available for Orthologs for SDCBPP3 Gene

Paralogs for SDCBPP3 Gene

No data available for Paralogs for SDCBPP3 Gene

Variants for SDCBPP3 Gene

Relevant External Links for SDCBPP3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SDCBPP3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SDCBPP3 Gene

Disorders for SDCBPP3 Gene

No disorders were found for SDCBPP3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SDCBPP3 Gene

Publications for SDCBPP3 Gene

No publications were found for SDCBPP3 Gene.

Products for SDCBPP3 Gene

Sources for SDCBPP3 Gene

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