Aliases for SDCBPP1 Gene
Aliases for SDCBPP1 Gene
External Ids for SDCBPP1 Gene
- HGNC: 44684
- Entrez Gene: 100128930
- Ensembl: ENSG00000226705
Previous GeneCards Identifiers for SDCBPP1 Gene
- GC10M006336
Summaries for SDCBPP1 Gene
GeneCards Summary for SDCBPP1 Gene
SDCBPP1 (Syndecan Binding Protein Pseudogene 1) is a Pseudogene.
Additional gene information for SDCBPP1 Gene
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SDCBPP1 Gene
Genomics for SDCBPP1 Gene
GeneHancer (GH) Regulatory Elements for SDCBPP1 Gene
Promoters and enhancers for SDCBPP1 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH10I006295 | Enhancer | 1.7 | FANTOM5 Ensembl ENCODE dbSUPER | 0.8 | -4.2 | -4218 | 7 | PKNOX1 SMAD1 MLX NEUROD1 IRF4 ETS1 ZNF121 ZNF207 ATF7 FOS | PFKFB3 ENSG00000213994 PRKCQ IL15RA RBM17 SDCBPP1 GC10M006317 LOC399715 | |
| GH10I006291 | Enhancer | 1.2 | FANTOM5 Ensembl ENCODE dbSUPER | 0.8 | +3.1 | 3097 | 0.8 | KLF1 SIN3A ELF1 NFIL3 SP1 PRDM6 ZNF512 ZBTB33 HNF4A | PRKCQ PFKFB3 SDCBPP1 LOC399715 | |
| GH10I006278 | Enhancer | 1.6 | FANTOM5 Ensembl ENCODE dbSUPER | 0.4 | +14.9 | 14908 | 2 | PKNOX1 FOXA2 ARID4B SIN3A ZNF48 ETS1 YY1 TCF12 FOS RXRA | PFKFB3 LOC399715 SDCBPP1 | |
| GH10I006290 | Enhancer | 0.4 | dbSUPER | 0.8 | +4.2 | 4200 | 0.3 | SREBF1 ZNF512 | SDCBPP1 LOC399715 | |
| GH10I006314 | Enhancer | 0.7 | ENCODE dbSUPER | 0.3 | -20.2 | -20216 | 1.6 | SP1 ATF3 SIN3A ZBTB33 REST FOSL2 FOS | LOC399715 GC10M006317 SDCBPP1 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data dump
GeneHancers around SDCBPP1 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Locations for SDCBPP1 Gene
Genomic Locations for SDCBPP1 Gene
- chr10:6,293,100-6,294,684
- (GRCh38/hg38)
- Size:
- 1,585 bases
- Orientation:
- Minus strand
- chr10:6,335,063-6,336,647
- (GRCh37/hg19)
Genomic View for SDCBPP1 Gene
Genes around SDCBPP1 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 10p15.1 by Ensembl
- 10p15.1 by Entrez Gene
- 10p15.1 by HGNC
SDCBPP1 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for SDCBPP1 Gene
Proteins for SDCBPP1 Gene
Post-translational modifications for SDCBPP1 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for SDCBPP1
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for SDCBPP1
- Origene Custom Protein Services for SDCBPP1
- Search GeneTex for Proteins for SDCBPP1
No data available for DME Specific Peptides for SDCBPP1 Gene
Domains & Families for SDCBPP1 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SDCBPP1 Gene
Function for SDCBPP1 Gene
Phenotypes From GWAS Catalog for SDCBPP1 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for SDCBPP1
-
- Search ViGene Biosciences for SDCBPP1
CRISPR Products
- Browse CRISPR knockouts for SDCBPP1
miRNA Products
- Search ViGene Biosciences for SDCBPP1
Inhibitory RNA Products
- Search ViGene Biosciences for SDCBPP1
Clone Products
- GenScript: Custom all cDNA clones Services for SDCBPP1
- VectorBuilder custom plasmid, inducible vectors for SDCBPP1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for SDCBPP1
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SDCBPP1 Gene
Localization for SDCBPP1 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SDCBPP1 Gene
Transcripts for SDCBPP1 Gene
mRNA/cDNA for SDCBPP1 Gene
- (1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
CRISPR Products
- Browse CRISPR knockouts for SDCBPP1
miRNA Products
- Search ViGene Biosciences for SDCBPP1
Inhibitory RNA Products
- Search ViGene Biosciences for SDCBPP1
Clone Products
- GenScript: Custom all cDNA clones Services for SDCBPP1
- VectorBuilder custom plasmid, inducible vectors for SDCBPP1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for SDCBPP1
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Expression for SDCBPP1 Gene
NURSA nuclear receptor signaling pathways regulating expression of SDCBPP1 Gene:
SDCBPP1
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SDCBPP1 Gene
Orthologs for SDCBPP1 Gene
No data available for Orthologs for SDCBPP1 Gene
Paralogs for SDCBPP1 Gene
No data available for Paralogs for SDCBPP1 Gene
Variants for SDCBPP1 Gene
Additional Variant Information for SDCBPP1 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- SDCBPP1
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SDCBPP1 Gene
Disorders for SDCBPP1 Gene
No disorders were found for SDCBPP1 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SDCBPP1 Gene
Publications for SDCBPP1 Gene
No publications were found for SDCBPP1 Gene.
Products for SDCBPP1 Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Primary Antibodies
- Browse Proteins and Enzymes
- Browse ELISAs
- Browse Activity Assays
- Browse cDNA Clones
- Browse Cell Culture Products
- Browse Cell Selection and Detection Kits
- Browse DNA Damage and Repair Kits
- Browse ELISpot/FluoroSpot Kits and Development Modules
- Browse Flow Cytometry Kits
- Browse Immunoprecipitation Assays
- Browse Luminex Assays
- Browse Peptides
- Browse Proteome Profiler Antibody Arrays
- Browse Small Molecules
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for SDCBPP1
- Origene Custom Protein Services for SDCBPP1
- Browse OriGene Inhibitory RNA Products For SDCBPP1
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for SDCBPP1
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For SDCBPP1
- GenScript: Custom all cDNA clones Services for SDCBPP1
- GenScript Custom Purified and Recombinant Proteins Services for SDCBPP1
- GenScript Custom Assay Services for SDCBPP1
- GenScript Custom overexpressing Cell Line Services for SDCBPP1
- Browse GenScript CRISPR for SDCBPP1
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
- Gene Synthesis: Any Gene in Any Vector
- Vector-based siRNA and miRNA, Ready for Transfection
- Gene Mutant Library, Variants up to 10^11
- Plasmid Preparation
- GenScript Custom Peptide Services for SDCBPP1
- Browse Sino Biological cDNA Clones
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- Browse Sino Biological Recombinant Proteins
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- Browse Sino Biological Control Vectors
- Sino Biological Transfection Reagent
- Sino Biological Anti-His Tag Antibody
- Novus Biologicals
- Novus Biologicals Tissue Microarrays
- Browse Antibodies at Cloud-Clone Corp.
- Browse Proteins at Cloud-Clone Corp.
- Browse Assay Kits at Cloud-Clone Corp.
- Browse Knockouts at Cloud-Clone Corp.
- Browse Knockins at Cloud-Clone Corp.
- Cloud-Clone Corp. disease models service
- Browse cDNA clones at Cloud-Clone Corp.
- Browse primers at Cloud-Clone Corp.
- Cloud-Clone Corp. primary cells service
- Cyagen custom Knockout/knockin (KOKI) mouse models for SDCBPP1
- VectorBuilder custom plasmid, inducible vectors for SDCBPP1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for SDCBPP1
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Search GeneTex for Antibodies for SDCBPP1
- Search GeneTex for Proteins for SDCBPP1
Sources for SDCBPP1 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
- (87) BioSystems
- (88) MaxQB
- (89) IUPHAR
- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
- (93) HOMER
- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
- (106) GTEx
- (107) ProteomicsDB
- (108) SCBT
- (109) DGIdb
- (110) ClinicalTrials
- (111) FDA Approved Drugs
- (112) RVIS
- (113) SIGNOR
- (114) diseasecard
- (115) NIH Rare Diseases
- (116) Orphanet
- (117) UMLS
- (118) GTR
- (119) Disease Ontology
- (120) Genetics Home Reference
- (121) MeSH
- (122) MedlinePlus
- (123) CDC
- (124) NINDS
- (125) NCBI Bookshelf
- (126) ClinVar
- (127) Gene Damage Index
- (128) ViGene Biosciences
- (129) HPO
- (130) UDN
- (131) VISTA
- (132) FANTOM5
- (133) ENCODE
- (134) ProSci
- (135) Horizon
- (136) NURSA
- (137) IID
- (138) Cyagen
- (139) VectorBuilder
- (140) SNPedia
- (141) BRCA Exchange
- (142) St John's Lab
- (143) CIViC
- (144) ProteoGenix
- (145) dbSUPER
- (146) TISSUES
- (147) Gene ORGANizer
- (148) abm
- (149) CrownBio
- (150) Human Protein Atlas
- (151) GWAS Catalog
- (152) Monarch Initiative
- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
- (156) UCNEbase
- (157) EPDnew