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Aliases for SDCBPP1 Gene

Aliases for SDCBPP1 Gene

  • Syndecan Binding Protein Pseudogene 1 2 3 5
  • Syndecan Binding Protein (Syntenin) Pseudogene 1 2

External Ids for SDCBPP1 Gene

Previous GeneCards Identifiers for SDCBPP1 Gene

  • GC10M006336

Summaries for SDCBPP1 Gene

GeneCards Summary for SDCBPP1 Gene

SDCBPP1 (Syndecan Binding Protein Pseudogene 1) is a Pseudogene.

Additional gene information for SDCBPP1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SDCBPP1 Gene

Genomics for SDCBPP1 Gene

GeneHancer (GH) Regulatory Elements for SDCBPP1 Gene

Promoters and enhancers for SDCBPP1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10I006295 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.8 -4.2 -4218 7 PKNOX1 SMAD1 MLX NEUROD1 IRF4 ETS1 ZNF121 ZNF207 ATF7 FOS PFKFB3 ENSG00000213994 PRKCQ IL15RA RBM17 SDCBPP1 GC10M006317 LOC399715
GH10I006291 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 0.8 +3.1 3097 0.8 KLF1 SIN3A ELF1 NFIL3 SP1 PRDM6 ZNF512 ZBTB33 HNF4A PRKCQ PFKFB3 SDCBPP1 LOC399715
GH10I006278 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +14.9 14908 2 PKNOX1 FOXA2 ARID4B SIN3A ZNF48 ETS1 YY1 TCF12 FOS RXRA PFKFB3 LOC399715 SDCBPP1
GH10I006290 Enhancer 0.4 dbSUPER 0.8 +4.2 4200 0.3 SREBF1 ZNF512 SDCBPP1 LOC399715
GH10I006314 Enhancer 0.7 ENCODE dbSUPER 0.3 -20.2 -20216 1.6 SP1 ATF3 SIN3A ZBTB33 REST FOSL2 FOS LOC399715 GC10M006317 SDCBPP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SDCBPP1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for SDCBPP1 Gene

Genomic Locations for SDCBPP1 Gene
1,585 bases
Minus strand

Genomic View for SDCBPP1 Gene

Genes around SDCBPP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SDCBPP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SDCBPP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SDCBPP1 Gene

Proteins for SDCBPP1 Gene

Post-translational modifications for SDCBPP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SDCBPP1 Gene

Domains & Families for SDCBPP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SDCBPP1 Gene

Function for SDCBPP1 Gene

Phenotypes From GWAS Catalog for SDCBPP1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SDCBPP1 Gene

Localization for SDCBPP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SDCBPP1 Gene

Pathways & Interactions for SDCBPP1 Gene

SuperPathways for SDCBPP1 Gene

No Data Available

Interacting Proteins for SDCBPP1 Gene

Gene Ontology (GO) - Biological Process for SDCBPP1 Gene


No data available for Pathways by source and SIGNOR curated interactions for SDCBPP1 Gene

Drugs & Compounds for SDCBPP1 Gene

No Compound Related Data Available

Transcripts for SDCBPP1 Gene

mRNA/cDNA for SDCBPP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SDCBPP1 Gene

No ASD Table

Relevant External Links for SDCBPP1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SDCBPP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SDCBPP1 Gene

NURSA nuclear receptor signaling pathways regulating expression of SDCBPP1 Gene:

genes like me logo Genes that share expression patterns with SDCBPP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SDCBPP1 Gene

Orthologs for SDCBPP1 Gene

Evolution for SDCBPP1 Gene

Gene Tree for SDCBPP1 (if available)
Gene Tree for SDCBPP1 (if available)

No data available for Orthologs for SDCBPP1 Gene

Paralogs for SDCBPP1 Gene

No data available for Paralogs for SDCBPP1 Gene

Variants for SDCBPP1 Gene

Additional Variant Information for SDCBPP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SDCBPP1 Gene

Disorders for SDCBPP1 Gene

No disorders were found for SDCBPP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SDCBPP1 Gene

Publications for SDCBPP1 Gene

No publications were found for SDCBPP1 Gene.

Products for SDCBPP1 Gene

Sources for SDCBPP1 Gene

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