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Aliases for SCML2P2 Gene

Subcategory (RNA class) for SCML2P2 Gene

lncRNA

Aliases for SCML2P2 Gene

  • SCML2 Pseudogene 2 2 3
  • AC133552.5 5

External Ids for SCML2P2 Gene

Previous GeneCards Identifiers for SCML2P2 Gene

  • GC16U901388
  • GC16P025386
  • GC16P025473

Summaries for SCML2P2 Gene

GeneCards Summary for SCML2P2 Gene

SCML2P2 (SCML2 Pseudogene 2) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for SCML2P2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SCML2P2 Gene

Genomics for SCML2P2 Gene

Regulatory Elements for SCML2P2 Gene

Enhancers for SCML2P2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH16H025256 1.2 ENCODE 48.7 +188.3 188293 2 MLX ZFP64 FEZF1 DMAP1 ZNF416 ZNF143 ZNF548 SP3 NFYC MEF2D RBBP6 LOC554206 HMGN2P3 SCML2P2 ENSG00000261669 ARHGAP17 ZKSCAN2 ENSG00000263326 LCMT1-AS2 LOC100421173
GH16H025047 2 FANTOM5 Ensembl ENCODE dbSUPER 23.8 -19.3 -19253 5 HDGF PKNOX1 ARNT ZFP64 SIN3A FEZF1 ZNF2 ZNF143 ZNF207 FOS RBBP6 HMGN2P3 ENSG00000263326 ENSG00000261669 SCML2P2 LOC554206 ARHGAP17 ZKSCAN2 LOC100421173 LCMT1-AS2
GH16H024998 1.4 Ensembl ENCODE dbSUPER 13.4 -69.7 -69687 2 FOXA2 ATF1 MLX ARID4B ZHX2 MXD4 NFYC MIER2 PPARG ZNF623 LINC02175 ENSG00000263326 SCML2P2 RBBP6 ZKSCAN2 LOC100421173 LOC554206 ENSG00000261669 PIR57337 GC16M024999
GH16H025037 1.4 FANTOM5 ENCODE dbSUPER 8.2 -31.3 -31334 2 PKNOX1 FOXA2 BMI1 FOS ATF7 ETV6 RUNX3 IKZF2 CREM JUNB SCML2P2 LOC554206 LINC02175
GH16H025135 0.6 ENCODE 13.4 +66.2 66168 0 CTCF ZNF555 ZNF654 SMC3 FOSL2 FOS RAD21 ZBTB40 LCMT1 LINC02175 ENSG00000263326 SCML2P2 RBBP6 ZKSCAN2 ARHGAP17 LOC100421173 LCMT1-AS2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SCML2P2 on UCSC Golden Path with GeneCards custom track

Genomic Location for SCML2P2 Gene

Chromosome:
16
Start:
25,069,570 bp from pter
End:
25,070,301 bp from pter
Size:
732 bases
Orientation:
Plus strand

Genomic View for SCML2P2 Gene

Genes around SCML2P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SCML2P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SCML2P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SCML2P2 Gene

ORGUL Member Location for SCML2P2 Gene

ORGUL Member Location for SCML2P2 gene

Proteins for SCML2P2 Gene

Post-translational modifications for SCML2P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SCML2P2 Gene

Domains & Families for SCML2P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SCML2P2 Gene

Function for SCML2P2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SCML2P2 Gene

Localization for SCML2P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SCML2P2 Gene

Pathways & Interactions for SCML2P2 Gene

SuperPathways for SCML2P2 Gene

No Data Available

Interacting Proteins for SCML2P2 Gene

Gene Ontology (GO) - Biological Process for SCML2P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SCML2P2 Gene

Drugs & Compounds for SCML2P2 Gene

No Compound Related Data Available

Transcripts for SCML2P2 Gene

mRNA/cDNA for SCML2P2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SCML2P2 Gene

No ASD Table

Relevant External Links for SCML2P2 Gene

GeneLoc Exon Structure for
SCML2P2
ECgene alternative splicing isoforms for
SCML2P2

Expression for SCML2P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SCML2P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of SCML2P2 Gene:

SCML2P2
genes like me logo Genes that share expression patterns with SCML2P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SCML2P2 Gene

Orthologs for SCML2P2 Gene

Evolution for SCML2P2 Gene

ENSEMBL:
Gene Tree for SCML2P2 (if available)
TreeFam:
Gene Tree for SCML2P2 (if available)

No data available for Orthologs for SCML2P2 Gene

Paralogs for SCML2P2 Gene

No data available for Paralogs for SCML2P2 Gene

Variants for SCML2P2 Gene

Relevant External Links for SCML2P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SCML2P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SCML2P2 Gene

Disorders for SCML2P2 Gene

No disorders were found for SCML2P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SCML2P2 Gene

Publications for SCML2P2 Gene

No publications were found for SCML2P2 Gene.

Products for SCML2P2 Gene

Sources for SCML2P2 Gene

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