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Aliases for SCML2P2 Gene

Subcategory (RNA class) for SCML2P2 Gene

lncRNA

Aliases for SCML2P2 Gene

  • SCML2 Pseudogene 2 2 3 5

External Ids for SCML2P2 Gene

Previous GeneCards Identifiers for SCML2P2 Gene

  • GC16U901388
  • GC16P025386
  • GC16P025473

Summaries for SCML2P2 Gene

GeneCards Summary for SCML2P2 Gene

SCML2P2 (SCML2 Pseudogene 2) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SCML2P2 Gene

Genomics for SCML2P2 Gene

Regulatory Elements for SCML2P2 Gene

Enhancers for SCML2P2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH16F025155 0.6 ENCODE 11.9 +86.6 86589 1.7 IRF9 ZNF585B CEBPA CEBPB CEBPG PRDM1 LCMT1 LOC554206 SCML2P2 ENSG00000263326 LCMT1-AS2 GC16P025764
GH16F025256 1.1 ENCODE 11.8 +188.3 188293 2.8 CREB3L1 MLX ZFP64 FEZF1 DMAP1 ZNF416 ZNF143 ZNF548 ZNF263 SP3 ENSG00000261669 LOC554206 ZKSCAN2 LOC105371146 LOC100420641 LOC105371143 HMGN2P3 LCMT1 SCML2P2 ENSG00000263326
GH16F024538 1.1 ENCODE 9.8 -528.8 -528844 4.7 HDGF MLX ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 ZNF207 ENSG00000261669 ENSG00000260751 LOC554206 ENSG00000263326 SCML2P2 RBBP6 TNRC6A
GH16F024699 1.1 Ensembl ENCODE 9.8 -368.2 -368243 3.0 CBX3 SIN3A RAD21 RFX5 YY1 CBX5 SMARCC2 RCOR1 FOS SMARCC1 SLC5A11 TNRC6A LOC554206 ENSG00000261669 ENSG00000263326 SCML2P2 LINC01567 GC16M024776
GH16F025037 1 FANTOM5 ENCODE 8.2 -31.3 -31334 2.1 HDGF PKNOX1 CREB3L1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 ZNF143 FOS LOC105371146 LOC105371143 LOC105371142 LOC100420641 HMGN2P3 SCML2P2 LOC554206 LOC283887
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around SCML2P2 on UCSC Golden Path with GeneCards custom track

Genomic Location for SCML2P2 Gene

Chromosome:
16
Start:
25,069,570 bp from pter
End:
25,070,301 bp from pter
Size:
732 bases
Orientation:
Plus strand

Genomic View for SCML2P2 Gene

Genes around SCML2P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SCML2P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SCML2P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SCML2P2 Gene

ORGUL Member Location for SCML2P2 Gene

ORGUL Member Location for SCML2P2 gene

Proteins for SCML2P2 Gene

Post-translational modifications for SCML2P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SCML2P2 Gene

Domains & Families for SCML2P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SCML2P2 Gene

Function for SCML2P2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SCML2P2 Gene

Localization for SCML2P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SCML2P2 Gene

Pathways & Interactions for SCML2P2 Gene

SuperPathways for SCML2P2 Gene

No Data Available

Interacting Proteins for SCML2P2 Gene

Gene Ontology (GO) - Biological Process for SCML2P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SCML2P2 Gene

Transcripts for SCML2P2 Gene

mRNA/cDNA for SCML2P2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SCML2P2 Gene

No ASD Table

Relevant External Links for SCML2P2 Gene

GeneLoc Exon Structure for
SCML2P2
ECgene alternative splicing isoforms for
SCML2P2

Expression for SCML2P2 Gene

mRNA expression in normal human tissues for SCML2P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of SCML2P2 Gene:

SCML2P2
genes like me logo Genes that share expression patterns with SCML2P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for SCML2P2 Gene

Orthologs for SCML2P2 Gene

Evolution for SCML2P2 Gene

ENSEMBL:
Gene Tree for SCML2P2 (if available)
TreeFam:
Gene Tree for SCML2P2 (if available)

No data available for Orthologs for SCML2P2 Gene

Paralogs for SCML2P2 Gene

No data available for Paralogs for SCML2P2 Gene

Variants for SCML2P2 Gene

Relevant External Links for SCML2P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SCML2P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SCML2P2 Gene

Disorders for SCML2P2 Gene

No disorders were found for SCML2P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SCML2P2 Gene

Publications for SCML2P2 Gene

No publications were found for SCML2P2 Gene.

Products for SCML2P2 Gene

Sources for SCML2P2 Gene

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