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Aliases for SCGB2B3P Gene

Aliases for SCGB2B3P Gene

  • Secretoglobin Family 2B Member 3, Pseudogene 2 3 5
  • Secretoglobin-Like Pseudogene 3
  • SCGB4A3P 3
  • C2B 3

External Ids for SCGB2B3P Gene

Previous GeneCards Identifiers for SCGB2B3P Gene

  • GC19P035137

Summaries for SCGB2B3P Gene

GeneCards Summary for SCGB2B3P Gene

SCGB2B3P (Secretoglobin Family 2B Member 3, Pseudogene) is a Pseudogene.

Additional gene information for SCGB2B3P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SCGB2B3P Gene

Genomics for SCGB2B3P Gene

Regulatory Elements for SCGB2B3P Gene

Enhancers for SCGB2B3P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19H034645 0.5 ENCODE 0.7 +0.2 152 1.2 E2F1 CTCF GATA3 ZSCAN4 RCOR1 ZNF181 ZNF302 SCGB2B3P SCGB2B2
GH19H034666 1.1 Ensembl ENCODE 0.3 +21.8 21793 1.2 KLF17 ZNF2 GLIS2 SP3 ZEB2 ZNF645 ZNF518A ZFP69B ZSCAN16 ZNF341 ZNF302 ZNF599 TMEM147-AS1 LINC01766 ZNF181 HAUS5 LOC100419842 LINC00904 ENSG00000270544 ENSG00000271171
GH19H034663 0.7 ENCODE 0.4 +17.5 17489 0.2 ZSCAN5A CTCF TSC22D4 MAX RAD21 ZNF143 KLF7 ZNF687 L3MBTL2 HLF MAG FXYD7 SCGB2B2 SCGB2B3P
GH19H034672 0.9 ENCODE 0.3 +28.0 28029 2.8 ELF3 TBP FOXA2 MLX ARID4B RARA ATF7 CREM THAP11 SP5 ZNF302 ZNF181 ZNF599 SCGB2B2 SCGB2B3P
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SCGB2B3P on UCSC Golden Path with GeneCards custom track

Genomic Locations for SCGB2B3P Gene

Genomic Locations for SCGB2B3P Gene
409 bases
Plus strand

Genomic View for SCGB2B3P Gene

Genes around SCGB2B3P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SCGB2B3P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SCGB2B3P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SCGB2B3P Gene

Proteins for SCGB2B3P Gene

Post-translational modifications for SCGB2B3P Gene

No Post-translational modifications

No data available for DME Specific Peptides for SCGB2B3P Gene

Domains & Families for SCGB2B3P Gene

Gene Families for SCGB2B3P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SCGB2B3P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SCGB2B3P Gene

Function for SCGB2B3P Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SCGB2B3P Gene

Localization for SCGB2B3P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SCGB2B3P Gene

Pathways & Interactions for SCGB2B3P Gene

SuperPathways for SCGB2B3P Gene

No Data Available

Interacting Proteins for SCGB2B3P Gene

Gene Ontology (GO) - Biological Process for SCGB2B3P Gene


No data available for Pathways by source and SIGNOR curated interactions for SCGB2B3P Gene

Drugs & Compounds for SCGB2B3P Gene

No Compound Related Data Available

Transcripts for SCGB2B3P Gene

mRNA/cDNA for SCGB2B3P Gene

(2) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SCGB2B3P Gene

Secretoglobin, family 2B, member 3, pseudogene:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SCGB2B3P Gene

No ASD Table

Relevant External Links for SCGB2B3P Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SCGB2B3P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SCGB2B3P Gene

NURSA nuclear receptor signaling pathways regulating expression of SCGB2B3P Gene:


SOURCE GeneReport for Unigene cluster for SCGB2B3P Gene:

genes like me logo Genes that share expression patterns with SCGB2B3P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SCGB2B3P Gene

Orthologs for SCGB2B3P Gene

Evolution for SCGB2B3P Gene

Gene Tree for SCGB2B3P (if available)
Gene Tree for SCGB2B3P (if available)

No data available for Orthologs for SCGB2B3P Gene

Paralogs for SCGB2B3P Gene

No data available for Paralogs for SCGB2B3P Gene

Variants for SCGB2B3P Gene

Sequence variations from dbSNP and Humsavar for SCGB2B3P Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type
rs1000501502 -- 34,644,740(+) ATTAT(A/G)TTAAT intron-variant, upstream-variant-2KB
rs1001262888 -- 34,645,431(+) TATGC(C/T)GCCAG intron-variant, upstream-variant-2KB
rs1001295247 -- 34,645,600(+) AGATA(C/T)ACATA intron-variant, upstream-variant-2KB
rs1002411335 -- 34,644,359(+) TTTTT(-/TTTG)TTTTT intron-variant, upstream-variant-2KB
rs1002936426 -- 34,644,188(+) AACAG(A/G)TAGTG intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for SCGB2B3P Gene

Variant ID Type Subtype PubMed ID
nsv1064154 CNV loss 25217958
esv5547 OTHER inversion 19470904
esv3329051 OTHER inversion 20981092
esv2758756 CNV gain 17122850

Relevant External Links for SCGB2B3P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SCGB2B3P Gene

Disorders for SCGB2B3P Gene

Relevant External Links for SCGB2B3P

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for SCGB2B3P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SCGB2B3P Gene

Publications for SCGB2B3P Gene

  1. Update of the human secretoglobin (SCGB) gene superfamily and an example of 'evolutionary bloom' of androgen-binding protein genes within the mouse Scgb gene superfamily. (PMID: 22155607) Jackson BC … Vasiliou V (Human genomics 2011) 2 3 60
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 60

Products for SCGB2B3P Gene

Sources for SCGB2B3P Gene

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