Set Analyses:
Advanced Search

Advanced Search

 
Search By
Section (entire)
for


 
or upload a file of gene symbols


Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

SCGB1A1 Gene

protein-coding   GIFtS: 62
GCID: GC11P062188

secretoglobin, family 1A, member 1 (uteroglobin)

(Previous name: uteroglobin )
(Previous symbol: UGB)
 Explore 68 diseases affiliated with
SCGB1A1 via our new
 Human Malady Compendium 
Biological research products
for SCGB1A1
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Secretoglobin, Family 1A, Member 1 (Uteroglobin)1 2     Urinary Protein 12 3
CC101 2 3 5     Urine Protein 12 3
CCSP1 2 3 5     CCPBP2 3
UGB1 2 3 5     UP-12 3
CC161 2     UP12 3
Uteroglobin1     Blastokinin1
Clara Cell Phospholipid-Binding Protein2 3     Secretoglobin Family 1A Member 13
Clara Cells 10 KDa Secretory Protein2 3     

External Ids:    HGNC: 125231   Entrez Gene: 73562   Ensembl: ENSG000001490217   OMIM: 1920205   UniProtKB: P116843   

Export aliases for SCGB1A1 gene to outside databases

Previous GC identifers: GC11P064700 GC11P063762 GC11P062437 GC11P061961 GC11P061943 GC11P058514


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for SCGB1A1:
This gene encodes a member of the secretoglobin family of small secreted proteins. The encoded protein has been
implicated in numerous functions including anti-inflammation, inhibition of phospholipase A2 and the sequestering of
hydrophobic ligands. Defects in this gene are associated with a susceptibility to asthma. (provided by RefSeq, May
2010)

UniProtKB/Swiss-Prot: UTER_HUMAN, P11684
Function: Binds phosphatidylcholine, phosphatidylinositol, polychlorinated biphenyls (PCB) and weakly progesterone,
potent inhibitor of phospholipase A2

Gene Wiki entry for SCGB1A1 (Uteroglobin)


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000011.9  NC_018922.1  NT_167190.1  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the SCGB1A1 gene promoter:
         SRF   RP58   FOXF2   AML1a   GATA-3   SRF (504 AA)   Nkx6-1   POU2F1   POU2F1a   LyF-1   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidSCGB1A1 promoter sequence
   Search SABiosciences Chromatin IP Primers for SCGB1A1

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat SCGB1A1


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 11q12.3   Ensembl cytogenetic band:  11q12.3   HGNC cytogenetic band: 11q12.3

SCGB1A1 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
SCGB1A1 gene location

GeneLoc information about chromosome 11         GeneLoc Exon Structure

GeneLoc location for GC11P062188:  view genomic region     (about GC identifiers)

Start:
62,172,575 bp from pter      End:
62,190,678 bp from pter
Size:
18,104 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: UTER_HUMAN, P11684 (See protein sequence)
Recommended Name: Uteroglobin precursor  
Size: 91 amino acids; 9994 Da
Subunit: Homodimer; antiparallel disulfide-linked
Subcellular location: Secreted
Secondary accessions: B2R5F2 Q6FHH3 Q9UCM2 Q9UCM4

Explore the universe of human proteins at neXtProt for SCGB1A1: NX_P11684

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_P11684

  • SCGB1A1 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins: NP_003348.1  
    ENSEMBL proteins: 
     ENSP00000432866   ENSP00000278282  

    Human Recombinant Protein Products: 
    Browse Purified and Recombinant Proteins at EMD Millipore
    R&D Systems Recombinant & Natural Proteins for SCGB1A1 (Uteroglobin/SCGB1A1)
    Browse recombinant and purified proteins available from Enzo Life Sciences
    OriGene Purified Protein: SCGB1A1
    OriGene Protein Over-expression Lysate: SCGB1A1
    OriGene Custom Protein Services for SCGB1A1 
    GenScript Custom Purified and Recombinant Proteins Services for SCGB1A1
    Novus Biologicals SCGB1A1 Proteins
    Novus Biologicals SCGB1A1 Lysates
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Uscn Proteins for SCGB1A1

    Gene Ontology (GO): 5/7 cellular component terms (GO ID links to tree view) (see all 7):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005576extracellular region ----
    GO:0005615extracellular space IEA--
    GO:0005635nuclear envelope IEA--
    GO:0005737cytoplasm ----
    GO:0005791rough endoplasmic reticulum IEA--


    SCGB1A1 for ontologies           About GeneDecksing



    SCGB1A1 Antibody Products: 
    EMD Millipore Mono- and Polyclonal Antibodies for the study of SCGB1A1
    R&D Systems Antibodies for SCGB1A1 (Uteroglobin/SCGB1A1)
    Browse OriGene Antibodies
    OriGene Custom Antibody Services for SCGB1A1 
    GenScript Custom Superior Antibodies Services for SCGB1A1
    Novus Biologicals SCGB1A1 Antibodies
    Search for Antibodies for SCGB1A1 at Abcam  
    Uscn Antibodies for SCGB1A1
    ThermoFisher Antibodies for SCGB1A1

    Assay Products for SCGB1A1: 
    Browse Kits and Assays available from EMD Millipore
    OriGene Custom Immunoassay Development
    Browse OriGene Fluorogenic Cell Assay Kits
    R&D Systems ELISAs for SCGB1A1 (Uteroglobin/SCGB1A1)
    GenScript Custom Assay Services for SCGB1A1
    Browse Enzo Life Sciences for kits & assays
    Uscn ELISAs and CLIAs for SCGB1A1


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    SCGB1A1 for domains           About GeneDecksing

    4 InterPro domains/families:
     IPR000329 Uteroglobin-like
     IPR016126 Secretoglobin
     IPR006038 Uteroglobin-like_superfam
     IPR006039 Uteroglobin-like_fam

    Graphical View of Domain Structure for InterPro Entry P11684

    ProtoNet protein and cluster: P11684

    1 Blocks protein family: IPB003628 Uteroglobin subtype

    UniProtKB/Swiss-Prot: UTER_HUMAN, P11684
    Similarity: Belongs to the secretoglobin family


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: UTER_HUMAN, P11684
    Function: Binds phosphatidylcholine, phosphatidylinositol, polychlorinated biphenyls (PCB) and weakly progesterone,
    potent inhibitor of phospholipase A2

    miRNA
    Products:
        
    Browse 3'-UTR reporter clones for miRNA target validation
    Browse MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat SCGB1A1
    1 QIAGEN miScript miRNA Assays for microRNA that regulate SCGB1A1:
    hsa-miR-143
    Browse SwitchGear 3'UTR luciferase reporter plasmids
    Inhib. RNA
    Products:
        
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for SCGB1A1 (see all 7)
    OriGene shRNA RFP: SCGB1A1
    OriGene siRNA: SCGB1A1
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat SCGB1A1

    Gene Editing
    Products:
    DNA2.0 Custom Protein Engineering Service for SCGB1A1

    Clone
    Products:
         
    Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for SCGB1A1 (see all 3)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for SCGB1A1 (see all 2)
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: SCGB1A1 (NM_003357)
    Browse Sino Biological Human cDNA Clones
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for SCGB1A1
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat SCGB1A1 

    Cell Line
    Products:
         
    GenScript Custom overexpressing Cell Line Services for SCGB1A1
    Search LifeMap BioReagents cell lines for SCGB1A1

    In Situ Assay
    Products:
       

     
    Search Advanced Cell Diagnostics for RNAscope RNA in situ hybridization assays for SCGB1A1

    Gene Ontology (GO): 1 molecular function term (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0019834phospholipase A2 inhibitor activity IEA--


    SCGB1A1 for ontologies           About GeneDecksing


    1 GenomeRNAi human phenotype for SCGB1A1:
     Decreased POU5F1-GFP protein e 

    Animal Models:
         Mouse knock-outs for SCGB1A1: Scgb1a1tm1Brst Scgb1a1tm1Abm
         9 MGI mutant phenotypes (inferred from 6 alleles(MGI details for Scgb1a1):
     endocrine/exocrine gland  growth/size  homeostasis/metabolism  immune system  mortality/aging 
     normal  renal/urinary system  respiratory system  tumorigenesis 

    SCGB1A1 for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways  About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Prostaglandin Synthesis and Regulation
    Prostaglandin Synthesis and Regulation1.00
    2FOXA1 transcription factor network
    FOXA1 transcription factor network1.00
    3Selected targets of C/EBPalpha
    Selected targets of C/EBPalpha1.00

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    1 EMD Millipore Pathway for SCGB1A1
        Selected targets of C/EBPalpha


    2 BioSystems Pathways for SCGB1A1 
        Prostaglandin Synthesis and Regulation
    FOXA1 transcription factor network



    SCGB1A1 for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for SCGB1A1

    STRING Interaction Network Preview (showing 5 interactants - click image to see 6)

    5/7 Interacting proteins for SCGB1A1 (P116842, 3 ENSP000002782824) via UniProtKB, MINT, STRING, and/or I2D (see all 7)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    FN1P027512, 3, ENSP000003468394MINT-6491137 MINT-6491111 MINT-6491129 I2D: score=2 STRING: ENSP00000346839
    LRP2P981643, ENSP000002638164I2D: score=2 STRING: ENSP00000263816
    CUBNO604943, ENSP000003670644I2D: score=2 STRING: ENSP00000367064
    LMBR1LQ6UX013, ENSP000002671024I2D: score=1 STRING: ENSP00000267102
    TRIM32Q130493I2D: score=1 
    About this table

    Gene Ontology (GO): 5/19 biological process terms (GO ID links to tree view) (see all 19):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000122negative regulation of transcription from RNA polymerase II promoter IEA--
    GO:0007165signal transduction NAS10587371
    GO:0007565female pregnancy NAS10587371
    GO:0007566embryo implantation TAS10587371
    GO:0009410response to xenobiotic stimulus IEA--


    SCGB1A1 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    SCGB1A1 for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for SCGB1A1

    10/1075 HMDB Compounds for SCGB1A1 (see all 1075)    About this table
    CompoundSynonyms CAS #PubMed Ids
    PC(14:0/14:0)Phosphatidylcholine(14:0/14:0) (see all 8)----
    PC(14:0/14:1(9Z))Phosphatidylcholine(14:0/14:1) (see all 14)----
    PC(14:0/15:0)GPCho(14:0/15:0) (see all 8)----
    PC(14:0/16:0)GPCho(30:0) (see all 8)----
    PC(14:0/16:1(9Z))1-myristoyl-2-palmitoleoyl-sn-glycero-3-phosphocholine (see all 14)----
    PC(14:0/18:0)1-myristoyl-2-stearoyl-sn-glycero-3-phosphocholine (see all 8)----
    PC(14:0/18:1(11Z))Phosphatidylcholine(14:0/18:1w7) (see all 14)----
    PC(14:0/18:1(9Z))1-myristoyl-2-oleoyl-sn-glycero-3-phosphocholine (see all 14)----
    PC(14:0/18:2(9Z,12Z))Phosphatidylcholine(32:2) (see all 14)----
    PC(14:0/18:3(6Z,9Z,12Z))GPCho(14:0/18:3w6) (see all 15)----

    1 DrugBank Compound for SCGB1A1    About this table
    CompoundSynonyms CAS #TypeActionsPubMed Ids
    4,4'-BIS([H]METHYLSULFONYL)-2,2',5,5'-TETRACHLOROBIPHENYL-- --target--10592235

    10/28 Novoseek chemical compound relationships for SCGB1A1 gene (see all 28)    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    hdmnkvldl 81.6 1 8818992 (1)
    progesterone 36.8 42 14735466 (4), 8440203 (4), 2378892 (2), 8050575 (2) (see all 13)
    ozone 31 2 15967207 (1), 16963661 (1)
    latex 28.4 7 9072037 (1), 19410594 (1), 9517618 (1), 9245950 (1) (see all 7)
    gp 130 24.6 4 10494044 (2), 12921923 (1), 9690329 (1)
    vitamin a 23.9 7 11193750 (1), 19410594 (1), 11679291 (1), 9245950 (1) (see all 7)
    doxycycline 16.7 3 10766812 (1), 16024721 (1), 16055670 (1)
    steroid 8.49 9 15813809 (2), 8887668 (1), 15829319 (1), 8050575 (1) (see all 8)
    cadmium 6.1 1 2203466 (1)
    lipid 4.96 4 16061484 (2), 18172803 (1), 18981578 (1)

    Search CenterWatch for drugs/clinical trials and news about SCGB1A1 / UTER 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for SCGB1A1 gene: 
    NM_003357.4  

    Unigene Cluster for SCGB1A1:

    Secretoglobin, family 1A, member 1 (uteroglobin)
    Hs.523732  [show with all ESTs]
    Unigene Representative Sequence: BI819219
    2 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000534397 ENST00000278282(uc001ntj.3)

    miRNA
    Products:
         
    Browse 3'-UTR reporter clones for miRNA target validation
    Browse OriGene MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat SCGB1A1
    1 QIAGEN miScript miRNA Assays for microRNA that regulate SCGB1A1:
    hsa-miR-143
    Browse SwitchGear 3'UTR luciferase reporter plasmids
    Inhib. RNA
    Products:
         
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for SCGB1A1 (see all 7)
    OriGene shRNA RFP: SCGB1A1
    OriGene siRNA: SCGB1A1
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat SCGB1A1
    Clone
    Products:
         
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for SCGB1A1 (see all 3)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for SCGB1A1 (see all 2)
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: SCGB1A1 (NM_003357)
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for SCGB1A1
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat SCGB1A1 
    Primer
    Products:
        
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for SCGB1A1
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat SCGB1A1
      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat SCGB1A1
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat SCGB1A1

    Additional cDNA sequence: 

    AK312165.1 BC004481.2 CR541780.1 U01101.1 X13197.1 

    1 DOTS entry:

    DT.113232 

    24/50 AceView cDNA sequences (see all 50):

    CR541780 X13197 BG548246 AA574369 U01101 BG546458 NM_003357 BF222605 
    BC004481 AA961093 BF810411 BF847674 BG540089 BF847952 BF810409 BM968177 
    BM998163 T92964 AA569479 BF814645 AA878269 BF810401 BF814633 BF814650 

    GeneLoc Exon Structure


    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    SCGB1A1 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: CTTTGAGTCC

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image

    SCGB1A1 expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table
    2 LifeMap In Vivo Development Anatomical Compartments/Cells 
    Tissue Anatomical Compartment CellCategory (developmental path)
    LungRespiratory BronchiolesClara CellsLung
    LungTracheaClara CellsLung
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization
    Stem Cell Differentiation: 5 LifeMap Cells 
    NameCategory
    PureStem™ progenitor Z1 (Embryonic Progenitor Cell)
    Lung Epithelial Progenitors (Efficient derivation...)Lung
    Liquid-liquid interface differentiated cells (Derivation of lung e...)
    Lung epithelial-like cells (Derivation of lung e...)
    Early proximal lung progenitors (Directed differentia...)

    See SCGB1A1 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for SCGB1A1

    SOURCE GeneReport for Unigene cluster: Hs.523732

    UniProtKB/Swiss-Prot: UTER_HUMAN, P11684
    Tissue specificity: Clara cells (nonciliated cells of the surface epithelium of the pulmonary airways)

        SABiosciences Expression via Pathway-Focused PCR Array including SCGB1A1: 
              Lung Cancer in human mouse rat

    Primer
    Products:
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for SCGB1A1
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat SCGB1A1
    QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat SCGB1A1
    QIAGEN QuantiFast Probe-based Assays in human, mouse, rat SCGB1A1
    In Situ
    Assay Products:
     

     
    Search Advanced Cell Diagnostics for RNAscope RNA in situ hybridization assays for SCGB1A1

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of human and mouse.

    Orthologs for SCGB1A1 gene from 1/5 species (see all 5)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Scgb1a11 , 5 secretoglobin, family 1A, member 1 (uteroglobin)1, 5 70.74(n)1
    55.56(a)1
      19 (6.05 cM)5
    222871  NM_011681.21  NP_035811.11 
     90836365 


    ENSEMBL Gene Tree for SCGB1A1 (if available)
    TreeFam Gene Tree for SCGB1A1 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
      --

    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/124 NCBI SNPs in SCGB1A1 are shown (see all 124    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 11 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs25130331,2
    C,F,A,--58513634(+) AGGTCG/AAGTCA 1 -- us2k15Minor allele frequency- A:0.29WA CSA 124
    rs413646501,2
    C,F,--58513803(+) GAATGG/ACCAGA 1 -- us2k11Minor allele frequency- A:0.03NA 120
    rs792518301,2
    --58513950(+) GGAGCA/TCAGGA 1 -- us2k10--------
    rs414654531,2
    C,--58513965(+) AGAGCA/CCTTCT 1 -- us2k12Minor allele frequency- C:0.08CSA WA 120
    rs414536451,2
    C,--58514382(+) CCAAGC/TGGCCC 1 -- us2k10--------
    rs414395491,2
    C--58514658(+) CACCCC/TGGTCA 2 P L mis10--------
    rs561984301,2
    C--58514780(+) CATTCC/TTGCTC 1 -- int10--------
    rs1126643061,2
    C,F,--58515092(+) TGCTGG/ACAGCT 1 -- int13Minor allele frequency- A:0.03NA 124
    rs1134871431,2
    --58515185(+) GAGGAG/ATATTC 1 -- int11Minor allele frequency- A:0.50CSA 2
    rs25130341,2
    C,F,A,H,--58515202(+) GAGAGC/ATTCCC 1 -- int19Minor allele frequency- A:0.13NS EA WA CSA 536

    HapMap Linkage Disequilibrium report for SCGB1A1 (62172575 - 62190678 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
          Database of Genomic Variants (DGV) variations for SCGB1A1: --
    Human Gene Mutation Database (HGMD): SCGB1A1

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing SCGB1A1
    DNA2.0 Custom Variant and Variant Library Synthesis for SCGB1A1

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    SCGB1A1 for disorders           About GeneDecksing

    OMIM gene information: 192020   
    OMIM disorders: 600807  
    20/68 diseases for SCGB1A1 (see all 68):    About MalaCards
    asthma    meconium aspiration syndrome    vitelliform macular dystrophy    bronchiolitis obliterans
    congenital diaphragmatic hernia    bronchopulmonary dysplasia    allergic rhinitis    ectopic pregnancy
    idiopathic interstitial pneumonia    crescentic glomerulonephritis    cystic fibrosis    macular dystrophy
    chronic obstructive pulmonary disease    iga glomerulonephritis    respiratory failure    idiopathic pulmonary fibrosis
    cystic fibrosis lung disease    glomerulonephritis    silicosis    rhinitis

    3 diseases from the University of Copenhagen DISEASES database for SCGB1A1:
    Asthma     Vitelliform macular dystrophy     IgA glomerulonephritis

    10/60 Novoseek disease relationships for SCGB1A1 gene (see all 60)    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    nephropathy iga 61.3 10 10977777 (3), 11967037 (2), 10716670 (1), 12200800 (1) (see all 7)
    bronchoalveolar lavage fluid 58.1 13 14551164 (1), 16215398 (1), 16052892 (1), 16251377 (1) (see all 11)
    bronchopulmonary dysplasia 52.9 3 12406855 (1), 18521627 (1), 15774846 (1), 18521628 (1)
    asthma 52 75 10619808 (5), 15549500 (4), 16387800 (4), 15467329 (3) (see all 29)
    lung diseases 49.4 20 15467329 (5), 14665489 (2), 7541278 (2), 8985135 (2) (see all 9)
    respiratory distress syndrome 48.4 4 18521627 (1), 15774846 (1), 11109058 (1)
    lung tumor 47.4 5 12826312 (2), 1394139 (1), 9191473 (1)
    adenocarcinoma lung 39.7 2 1634515 (1), 16463657 (1)
    nasal polyps 39.5 6 15208596 (4), 18702901 (1), 19076932 (1)
    atopy 39.3 3 7733299 (1), 9550363 (1), 17716718 (1)

    Genetic Association Database (GAD): SCGB1A1
    Human Genome Epidemiology (HuGE) Navigator: SCGB1A1 (54 documents)

    Export disorders for SCGB1A1 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for SCGB1A1 gene, integrated from 9 sources (see all 344):
    (articles sorted by number of sources associating them with SCGB1A1)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Human CC10, the homologue of rabbit uteroglobin: genomic cloning, chromosomal localization and expression in endometrial cell lines. (PubMed id 1284526)1, 2, 3, 9 Wolf M.... Suske G. (1992)
    2. Acute asthma in children: Relationships among CD14 and CC16 genotypes, plasma levels, and severity. (PubMed id 16387800)1, 4, 9 Martin A.C....LeSouef P.N. (2006)
    3. Association of an intragenic microsatellite marker in the CC16 gene with asthma in the Indian population. (PubMed id 15549500)1, 4, 9 Sharma S. and Ghosh B. (2004)
    4. [Study on association between CC16 gene G38A mutation and asthma in the patients of Han population in Chongqing, China] (PubMed id 14669228)1, 4, 9 Gui Q....Li S.P. (2003)
    5. A polymorphism of the CC16 gene is associated with an increased risk of asthma. (PubMed id 9643286)1, 4, 9 Laing I.A....Le Souef P.N. (1998)
    6. The Clara cell10 adenine38guanine polymorphism and sarcoidosis susceptibility in Dutch and Japanese subjects. (PubMed id 15297273)1, 4, 9 Janssen R....van den Bosch J.M. (2004)
    7. Association between asthma-related phenotypes and the CC16 A38G polymorphism in an unselected population of young adult Danes. (PubMed id 15744536)1, 4, 9 Candelaria P.V....Le Souef P.N. (2005)
    8. Role of uteroglobin G38A polymorphism in the progression of IgA nephropathy in Japanese patients. (PubMed id 11967037)1, 4, 9 Narita I....Gejyo F. (2002)
    9. Evaluation of the -26G>A CC16 polymorphism in acute respiratory distress syndrome. (PubMed id 16215398)1, 4, 9 Frerking I....Nickel R. (2005)
    10. Polymorphism of Clara cell 10-kD protein gene of sarcoidosis. (PubMed id 14551164)1, 4, 9 Ohchi T....Sato N. (2004)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 7356 HGNC: 12523 AceView: SCGB1A1 Ensembl:ENSG00000149021 euGenes: HUgn7356
    ECgene: SCGB1A1 H-InvDB: SCGB1A1

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for SCGB1A1 Pharmacogenomics, SNPs, Pathways
    ATLAS Chromosomes in Cancer entry for SCGB1A1 Genetics and Cytogenetics in Oncology and Haematology

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for SCGB1A1 gene:
    Search GeneIP for patents involving SCGB1A1

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences),
    In Situ Hybridization Assays from
    Advanced Cell Diagnostics
    About This Section

     Browse for Gene Knock-down Tools from EMD Millipore
     Browse Kits and Assays available from EMD Millipore
     Browse Purified and Recombinant Proteins at EMD Millipore
     Browse Small Molecules at EMD Millipore
     EMD Millipore Mono- and Polyclonal Antibodies for the study of SCGB1A1
     Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
     
     EMD Millipore Custom Antibody & Bulk Services
     EMD Millipore Preclinical / Clinical Development Services
     EMD Millipore Immunoassay Services
     EMD Millipore Target Screening & Profiling Services

      
     Antibodies for SCGB1A1 (Uteroglobin/SCGB1A1)   Browse Cell Culture Products  
     ELISAs for SCGB1A1 (Uteroglobin/SCGB1A1)   Browse Flow Cytometry Kits  
     Browse Primer Pairs   Browse Kinase Activity Assays/Reagents  
     Browse ELISpot Kits/Development Modules   Browse TFB/Immunoprecipitation Assays  
     Browse Apoptosis Detection Kits/Reagents   Browse Ubiquitin Proteasome Pathway (UPP) Assay Kits/Reagents  
     Browse DNA Damage/Repair Kits/Reagents   Browse Multiplex/Array Assay Kits/Reagents  
     Browse Cell Selection/Detection Kits/Reagents   Browse Secondary Antibodies/Controls/Staining Reagents  
     Browse Phosphatase Activity Assays/Reagents   Recombinant/Natural Proteins for SCGB1A1 (Uteroglobin/SCGB1A1)  
     Browse OriGene Antibodies   OriGene shRNA RFP for SCGB1A1  
     OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for SCGB1A1   OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for SCGB1A1  
     OriGene Protein Over-expression Lysate for SCGB1A1   Browse OriGene Fluorogenic Cell Assay Kits  
     OriGene siRNA for SCGB1A1   Browse 3'-UTR reporter clones for miRNA target validation  
     OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for SCGB1A1   OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for SCGB1A1  
     Browse OriGene GFP tagged cDNA clones in CMV expression vector   Browse OriGene MicroRNA Expression Plasmids  
     Browse OriGene basic RS shRNAs   Browse OriGene validated miRNA SYBR primer pairs  
     OriGene Purified Protein for SCGB1A1   OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling  
     OriGene Custom Antibody Services for SCGB1A1   OriGene Custom Protein Services for SCGB1A1  
     OriGene Custom Immunoassay Development  

     
     
     QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat SCGB1A1
     QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing SCGB1A1
     QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat SCGB1A1
     QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat SCGB1A1
     QIAGEN QuantiFast Probe-based Assays in human, mouse, rat SCGB1A1
     QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat SCGB1A1
     GenScript Custom Purified and Recombinant Proteins Services for SCGB1A1 GenScript cDNA clones with any tag delivered in your preferred vector for SCGB1A1
     GenScript Custom Assay Services for SCGB1A1 GenScript Custom Superior Antibodies Services for SCGB1A1
     GenScript Custom overexpressing Cell Line Services for SCGB1A1 CloneReady with Over 120,000 Genes
     Gene Synthesis: Any Gene in Any Vector Vector-based siRNA and miRNA, Ready for Transfection
     Gene Mutant Library, Variants up to 10^11 Plasmid Preparation
     Custom Peptide Services
     Search for Antibodies & Assays

     Regulatory tfbs in SCGB1A1 promoter
     Search Chromatin IP Primers for SCGB1A1
     RT2 qPCR Primer Assay in human, mouse, rat SCGB1A1
     GNC Network for SCGB1A1
     SABiosciences PCR Arrays including human, mouse, rat SCGB1A1
     Search Tocris compounds for SCGB1A1
     Browse Sino Biological Proteins and Antibodies
     Browse Sino Biological cDNA Clones
     Antibodies/Proteins Production Services
     Rabbit Monoclonal Antibody Platform
     Bulk Purchasing
     Search www.enzolifesciences.com for proteins, assays, substrates, inhibitors & antibodies
     Novus Tissue Slides
     SCGB1A1 antibodies
     SCGB1A1 proteins
     SCGB1A1 lysates
     Search for Antibodies for SCGB1A1 at Abcam
     See all of Abcam's Antibodies, Kits and Proteins for SCGB1A1
     Custom Antibody / Protein Production Service
     Bulk Purchasing
     Advantages of Rabbit Monoclonal antibodies
     Abcam protocols and scientific support
     Browse ProSpec Recombinant Proteins




     SCGB1A1 Proteins, Antibodies, CLIAs, and ELISAs
     Search LifeMap BioReagents cell lines for SCGB1A1
     Gene Synthesis
     Protein Engineering
     Variant Library Synthesis
     Codon Optimization
     Protein Production and Purification
     Search Advanced Cell Diagnostics for RNAscope RNA in situ hybridization assays for SCGB1A1
     Browse SwitchGear 3'UTR luciferase reporter plasmids for SCGB1A1
     SwitchGear Promoter luciferase reporter plasmids for SCGB1A1
     ThermoFisher Antibodies for SCGB1A1
     Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat SCGB1A1
           
    GeneCards Homepage - Last full update: 18 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 27 Apr 2013

    View Random Gene

    Category
    VWF
    (GIFTS: 73)
    von Willebrand factor
    GIFtS Group
    The GeneCards human gene database gene index: 1 3 5 6 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 


    Developed at the Crown Human Genome Center, Department of Molecular Genetics, the Weizmann Institute of Science

    Hot genes      Disease genes      SCGB1A1 gene at Home site.
    hostname: 356977-web1.xennexinc.com index build: 100 solr: 1.4