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SCFD1 Gene

protein-coding   GIFtS: 56
GCID: GC14P031091

Sec1 Family Domain Containing 1

(Previous name: chromosome 14 open reading frame 163)
(Previous symbol: C14orf163)
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(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, 10fRNAdb, 12H-InvDB, 13NCBI, 14NONCODE, and/or 15RNAdb)
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Aliases
Sec1 Family Domain Containing 11 2     SLY1P2
C14orf1631 2 3     Sec1 Family Domain-Containing Protein 12
Syntaxin-Binding Protein 1-Like 22 3     Vesicle Transport-Related Protein2
STXBP1L22 3     KIAA09173
Chromosome 14 Open Reading Frame 1631     Sly1p3
RA4102     SLY1 Homolog3
SLY12     

External Ids:    HGNC: 207261   Entrez Gene: 232562   Ensembl: ENSG000000921087   UniProtKB: Q8WVM83   

Export aliases for SCFD1 gene to outside databases

Previous GC identifers: GC14P029082 GC14P029083 GC14P030161 GC14P011209


(According to Entrez Gene, GeneCards, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
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GeneCards Summary for SCFD1 Gene:
SCFD1 (sec1 family domain containing 1) is a protein-coding gene. GO annotations related to this gene include syntaxin binding and protein N-terminus binding.

UniProtKB/Swiss-Prot: SCFD1_HUMAN, Q8WVM8
Function: Plays a role in SNARE-pin assembly and Golgi-to-ER retrograde transport via its interaction with COG4.
Involved in vesicular transport between the endoplasmic reticulum and the Golgi (By similarity)

Gene Wiki entry for SCFD1 Gene


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 75), Regulatory elements and Epigenetics data according to QIAGEN, and/or SwitchGear Genomics)
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RefSeq DNA sequence at NCBI GenBank:
NC_000014.8  NT_026437.13  NC_018925.2  
Regulatory elements:
   Regulatory transcription factor binding sites in the SCFD1 gene promoter:
         USF1   LCR-F1   C/EBPalpha   MEF-2A   AREB6   POU2F1   USF-1   POU2F1a   aMEF-2   RSRFC4   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidSCFD1 promoter sequence
   Search Chromatin IP Primers for SCFD1

Epigenetics:
DNA Methylation CpG Assay Predesigned for Pyrosequencing in human, mouse, rat SCFD1


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 14q12   Ensembl cytogenetic band:  14q12   HGNC cytogenetic band: 14q12

SCFD1 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
SCFD1 gene location

GeneLoc information about chromosome 14         GeneLoc Exon Structure

GeneLoc location for GC14P031091:  view genomic region     (about GC identifiers)

Start:
31,091,318 bp from pter      End:
31,205,018 bp from pter
Size:
113,701 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, 2neXtProt, Ensembl, and/or Reactome, Modification sites according to PhosphoSitePlus, Specific Peptides from DME, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, Cloud-Clone Corp., eBioscience, and/or antibodies-online,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, Cloud-Clone Corp., eBioscience, and/or antibodies-online, Antibodies by EMD Millipore, R&D Systems, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, Cloud-Clone Corp, antibodies-online, and/or others.)
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UniProtKB/Swiss-Prot: SCFD1_HUMAN, Q8WVM8 (See protein sequence)
Recommended Name: Sec1 family domain-containing protein 1  
Size: 642 amino acids; 72380 Da
Subunit: Interacts with STX17. Interacts with STX5A. Interacts with the COG complex via COG4 (By similarity)
Sequence caution: Sequence=AAD40381.1; Type=Frameshift; Positions=Several; Sequence=AAD48586.1; Type=Frameshift;
Positions=Several; Sequence=AAP97146.1; Type=Frameshift; Positions=5; Sequence=BAA74940.2; Type=Erroneous
initiation;
Secondary accessions: A8K2Z5 B7Z4U7 B7Z594 O60754 O94990 Q7Z529 Q9BZI3 Q9UNL3 Q9Y6A8
Alternative splicing: 3 isoforms:  Q8WVM8-1   Q8WVM8-2   Q8WVM8-3   

Explore the universe of human proteins at neXtProt for SCFD1: NX_Q8WVM8

Explore proteomics data for SCFD1 at MOPED

Post-translational modifications: 

  • Ubiquitination2 at Lys63, Lys324, Lys494, Lys501
  • Modification sites at PhosphoSitePlus

  • See SCFD1 Protein Expression from SPIRE MOPED, PaxDB, and MaxQB

    REFSEQ proteins (6 alternative transcripts): 
    NP_001244305.1  NP_001269960.1  NP_001269961.1  NP_001269962.1  NP_057190.2  NP_878255.1  

    ENSEMBL proteins: 
     ENSP00000390783   ENSP00000452323   ENSP00000451298   ENSP00000443010   ENSP00000451811  
     ENSP00000452178   ENSP00000451064   ENSP00000309417   ENSP00000450755   ENSP00000452308  
     ENSP00000379870   ENSP00000452046   ENSP00000452448   ENSP00000450546   ENSP00000388078  
     ENSP00000443537  

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    Cloud-Clone Corp. Proteins for SCFD1

     
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    antibodies-online proteins for SCFD1 (2 products) 

     
    antibodies-online peptides for SCFD1

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    (According to HGNC, IUPHAR, InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
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    2 InterPro protein domains:
     IPR001619 Sec1-like
     IPR027482 Sec-1-like_dom2

    Graphical View of Domain Structure for InterPro Entry Q8WVM8

    ProtoNet protein and cluster: Q8WVM8

    1 Blocks protein domain: IPB001619 Sec1-like protein

    UniProtKB/Swiss-Prot: SCFD1_HUMAN, Q8WVM8
    Similarity: Belongs to the STXBP/unc-18/SEC1 family


    Find genes that share domains with SCFD1           About GenesLikeMe


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, genOway,
    transcription factor targeting from QIAGEN and/or HOMER, miRNA Gene Targets from miRTarBase, shRNA from OriGene, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, SwitchGear Genomics, Gene Editing from DNA2.0, Clones from OriGene, GenScript, Sino Biological, DNA2.0, Vector BioLabs and/or Addgene, Cell Lines from GenScript, ESI BIO, In Situ Hybridization Assays from Advanced Cell Diagnostics, Flow cytometry from eBioscience, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene.)
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    Molecular Function:

         UniProtKB/Swiss-Prot Summary: SCFD1_HUMAN, Q8WVM8
    Function: Plays a role in SNARE-pin assembly and Golgi-to-ER retrograde transport via its interaction with COG4.
    Involved in vesicular transport between the endoplasmic reticulum and the Golgi (By similarity)

         Gene Ontology (GO): 3 molecular function terms:    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005515protein binding IPI19536132
    GO:0019905syntaxin binding ISS--
    GO:0047485protein N-terminus binding IEA--
         
    Find genes that share ontologies with SCFD1           About GenesLikeMe


    Phenotypes:
         4 GenomeRNAi human phenotypes for SCFD1:
     Decreased Tat-dependent transc  Decreased p24 protein expressi  Increased gamma-H2AX phosphory  Synthetic lethal with Ras 

    Animal Models:
       genOway: Develop your customized and physiologically relevant rodent model for SCFD1

    miRNA
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    miRTarBase miRNAs that target SCFD1:
    hsa-mir-186-5p (MIRT044947)

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    2 qRT-PCR Assays for microRNAs that regulate SCFD1:
    hsa-miR-203 hsa-miR-548c-3p
    SwitchGear 3'UTR luciferase reporter plasmidSCFD1 3' UTR sequence
    Inhib. RNA
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    GenScript: all cDNA clones in your preferred vector (see all 2): SCFD1 (NM_182835)
    Browse Sino Biological Human cDNA Clones
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    (According to UniProtKB, COMPARTMENTS Subcellular localization database, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene.)
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    Subcellular locations from UniProtKB/Swiss-Prot
    SCFD1_HUMAN, Q8WVM8: Cytoplasm (By similarity). Endoplasmic reticulum membrane; Peripheral membrane protein (By
    similarity). Golgi apparatus, Golgi stack membrane; Peripheral membrane protein (By similarity)
    Subcellular locations from COMPARTMENTS: 

    CompartmentConfidence
    endoplasmic reticulum5
    golgi apparatus5
    plasma membrane4
    cytosol3
    mitochondrion1
    nucleus1
    peroxisome1
    vacuole1

    Gene Ontology (GO): Selected cellular component terms (see all 6):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005789endoplasmic reticulum membrane IEA--
    GO:0005798Golgi-associated vesicle ISS--
    GO:0005801cis-Golgi network IDA15649705
    GO:0005886plasma membrane ISS--
    GO:0017119colocalizes with Golgi transport complex ISS--

    Find genes that share ontologies with SCFD1           About GenesLikeMe


    (SuperPaths according to PathCards, Pathways according to R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Sino Biological, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to QIAGEN, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene).
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        Custom Pathway & Disease-focused RT2 Profiler PCR Arrays for SCFD1
    Interactions:

        Search GeneGlobe Interaction Network for SCFD1

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    Selected Interacting proteins for SCFD1 (Q8WVM81, 2, 3 ENSP000003907834) via UniProtKB, MINT, STRING, and/or I2D (see all 151)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    COG4Q9H9E31, 2, 3, ENSP000003157754EBI-722569,EBI-368382 MINT-7296985 MINT-7296900 MINT-7296997 MINT-7296837 MINT-7296817 MINT-7296950 MINT-7296858 MINT-7296787 MINT-7296930 MINT-7296769 MINT-7296883 MINT-7296802 I2D: score=1 STRING: ENSP00000315775
    COG3Q96JB22, 3, ENSP000002586544MINT-7296817 MINT-7296787 MINT-7296769 MINT-7296802 I2D: score=5 STRING: ENSP00000258654
    PPBPP027752, 3MINT-65057 I2D: score=4 
    COG7P834362, ENSP000003054424MINT-7296817 MINT-7296787 MINT-7296769 MINT-7296802 STRING: ENSP00000305442
    COG8Q96MW52, ENSP000003054594MINT-7296787 MINT-7296769 MINT-7296802 STRING: ENSP00000305459
    About this table

    Gene Ontology (GO): Selected biological process terms (see all 8):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0001666response to hypoxia IEA--
    GO:0006890retrograde vesicle-mediated transport, Golgi to ER ISS--
    GO:0006892post-Golgi vesicle-mediated transport ISS--
    GO:0006904vesicle docking involved in exocytosis IEA--
    GO:0009636response to toxic substance IEP15649705

    Find genes that share ontologies with SCFD1           About GenesLikeMe



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience, ApexBio, HMDB, BitterDB, and/or Novoseek, Ligands according to IUPHAR, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB)
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    Browse Small Molecules at EMD Millipore
       Browse drugs & compounds from Enzo Life Sciences
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    Browse Tocris compounds for SCFD1



    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 236 Homo sapiens; Apr 25 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN, SwitchGear Genomics,
    Tagged/untagged cDNA clones from OriGene, GenScript, DNA2.0, Vector BioLabs, and/or Addgene, Primers from OriGene, and/or QIAGEN, Flow cytometry from eBioscience )
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    REFSEQ mRNAs for SCFD1 gene (6 alternative transcripts): 
    NM_001257376.1  NM_001283031.1  NM_001283032.1  NM_001283033.1  NM_016106.3  NM_182835.2  

    Unigene Cluster for SCFD1:

    Sec1 family domain containing 1
    Hs.369168  [show with all ESTs]
    Unigene Representative Sequence: NM_016106
    Selected Ensembl transcripts including schematic representations, and UCSC links where relevant (see all 26):
    ENST00000458591(uc001wqm.1 uc001wqn.1 uc010tpg.1 uc010tph.1 uc010amf.1)
    ENST00000555259(uc010amd.1) ENST00000463622 ENST00000544052 ENST00000556768
    ENST00000484733 ENST00000557713 ENST00000311943 ENST00000557076 ENST00000553693
    ENST00000396629(uc010tpi.1) ENST00000556413 ENST00000554776 ENST00000556534
    ENST00000469043 ENST00000554819 ENST00000553278 ENST00000555953
    miRNA
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    hsa-miR-203 hsa-miR-548c-3p
    SwitchGear 3'UTR luciferase reporter plasmidSCFD1 3' UTR sequence
    Inhib. RNA
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      QuantiTect SYBR Green Assays in human, mouse, rat SCFD1
      QuantiFast Probe-based Assays in human, mouse, rat SCFD1

    Additional mRNA sequence: 

    AB020724.2 AF067205.1 AF086916.1 AF092139.1 AF110646.1 AF319958.1 AK222820.1 AK290410.1 
    AK297873.1 AK298622.1 AK299222.1 AK301406.1 AK307960.1 AK308587.1 AK316212.1 BC017734.1 
    NR_047546.1 NR_047547.1 NR_047548.1 

    23 DOTS entries:

    DT.455143  DT.101983316  DT.100879677  DT.92442089  DT.100879668  DT.120759707  DT.120759728  DT.40110612 
    DT.100037068  DT.100697854  DT.100879674  DT.211621  DT.100668750  DT.100879648  DT.101975979  DT.100652537 
    DT.100879672  DT.100879679  DT.120759745  DT.120759765  DT.91668778  DT.100879671  DT.99945462 

    Selected AceView cDNA sequences (see all 305):

    BU161363 BG260882 BU951374 AA883110 BM457930 CA429766 BP873336 NM_182835 
    AI356311 BQ638648 CA424929 AW102840 BF436897 BX367916 BU521154 AA385690 
    BQ000104 AI610812 CR617066 CR602903 BQ183200 AB020724 AW339038 AI379424 

    GeneLoc Exon Structure


    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, Protein expression images according to data from SPIRE 1MOPED, 2PaxDb, and 3MaxQB, plus additional links to SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from QIAGEN, Primers from OriGene, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
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    SCFD1 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS <intensity>2/3
    CGAP TAG: AATACAGGAT
    SCFD1 Expression
    About this image

    SCFD1 Protein expression data from MOPED1, PaxDb2 and MaxQB3    About this image

    SCFD1 Protein Expression

    SOURCE GeneReport for Unigene cluster: Hs.369168
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    In Situ
    Assay Products:
     

     
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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
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    This gene was present in the common ancestor of eukaryotes.

    Orthologs for SCFD1 gene from Selected species (see all 24)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Scfd11 , 5 Sec1 family domain containing 11, 5 91.1(n)1
    97.46(a)1
      12 (22.11 cM)5
    769831  NM_029825.21  NP_084101.11 
     513775805 
    chicken
    (Gallus gallus)
    Aves SCFD11 sec1 family domain containing 1 84.87(n)
    94.11(a)
      423307  NM_001199714.1  NP_001186643.1 
    lizard
    (Anolis carolinensis)
    Reptilia --
    --
    Uncharacterized protein
    90(a)
    84(a)
    many → 1
    many → 1
    1(26219874-26229400)
    2(57137870-57182661)
    African clawed frog
    (Xenopus laevis)
    Amphibia Xl.83972 Xenopus laevis transcribed sequence with moderate similarity more 79.85(n)    CA789359.1 
    zebrafish
    (Danio rerio)
    Actinopterygii sly12 suppressor of ypt1 77.3(n)   317732  AY167023.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta Slh1 SLY-1 homologous 56.69(n)
    59.55(a)
      33434  NM_205892.2  NP_995614.1 
    worm
    (Caenorhabditis elegans)
    Secernentea F43D9.31 F43D9.3 56.17(n)
    50.24(a)
      185707  NM_001129225.2  NP_001122697.2 
    baker's yeast
    (Saccharomyces cerevisiae)
    Saccharomycetes SLY1(YDR189W)4
    SLY11
    Hydrophilic protein involved in vesicle trafficking more4
    SLY11
    47.69(n)1
    34.75(a)1
      4(838392-840392)4
    8517701, 4  NP_010475.11, 4 
    thale cress
    (Arabidopsis thaliana)
    eudicotyledons ATSLY11 ATSLY1 49.34(n)
    40.26(a)
      816310  NM_127354.4  NP_179389.1 
    rice
    (Oryza sativa)
    Liliopsida Os03g06208001 Os03g0620800 47.02(n)
    41.22(a)
      4333468  NM_001057212.1  NP_001050677.1 


    ENSEMBL Gene Tree for SCFD1 (if available)
    TreeFam Gene Tree for SCFD1 (if available)

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
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    Paralogs for SCFD1 gene
    1 SIMAP similar gene for SCFD1 using alignment to 14 protein entries:     SCFD1_HUMAN (see all proteins):
    STXBP2

    Find genes that share paralogs with SCFD1           About GenesLikeMe



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, 4UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD), the Human Cytochrome P450 Allele Nomenclature Database, and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers, Cancer Mutation PCR Arrays and Assays, and Copy Number PCR Arrays from QIAGEN)
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    Selected SNPs for SCFD1 (see all 2125)    About this table                                 

    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 14 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1401092911,2
    --31089557(+) TGGGAA/GAGAAT 6 -- us2k10--------
    rs1840062521,2
    --31089579(+) CTGAAA/GTGGCT 6 -- us2k10--------
    rs1469503451,2
    C--31089755(+) ATATTA/GGTAAT 6 -- us2k10--------
    rs2291411,2
    C,F,O,A--31089772(-) TGTGTG/TTCTTC 6 -- us2k116Minor allele frequency- N:0.00MN EA NA WA CSA 773
    rs2017460061,2
    --31089792(+) GTTAA-/TTTC  
            
    TTAAT
    6 -- us2k10--------
    rs576181741,2
    C,F--31089825(+) AAAAAT/CGAGAT 6 -- us2k12Minor allele frequency- C:0.05WA 120
    rs2291421,2
    C,A--31089898(-) AGATCG/ACGCCA 6 -- us2k13Minor allele frequency- A:0.17NA WA 6
    rs1113599691,2
    C,F--31089965(+) CCCAGG/TAGCTG 6 -- us2k11Minor allele frequency- T:0.50WA 2
    rs1816021621,2
    --31089998(+) CACCCA/GGCTAA 6 -- us2k10--------
    rs1842867391,2
    --31090051(+) GGCTGG/TTCTCG 6 -- us2k10--------

    HapMap Linkage Disequilibrium report for SCFD1 (31091318 - 31205018 bp)

    Structural Variations
         Database of Genomic Variants (DGV) 10 variations for SCFD1:    About this table    
    Variant IDTypeSubtypePubMed ID
    esv1928439CNV Deletion18987734
    nsv509529CNV Insertion20534489
    nsv84774CNV Insertion16902084
    nsv84475CNV Insertion16902084
    esv269681CNV Insertion20981092
    esv269610CNV Insertion20981092
    nsv1230CNV Insertion18451855
    esv33189CNV Loss17666407
    nsv901581CNV Gain21882294
    nsv526536CNV Gain19592680

    Site Specific Mutation Identification with PCR Assays
    Search QIAGEN SeqTarget long-range PCR primers for resequencing SCFD1
    DNA2.0 Custom Variant and Variant Library Synthesis for SCFD1

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
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    Find genes that share disorders with SCFD1           About GenesLikeMe

    Genetic Association Database (GAD): SCFD1
    Human Genome Epidemiology (HuGE) Navigator: SCFD1 (2 documents)

    Export disorders for SCFD1 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
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    PubMed articles for SCFD1 gene, integrated from 10 sources (see all 48):
    (articles sorted by number of sources associating them with SCFD1)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PubMed id 20379614)1, 4 Rose J.E....Uhl G.R. (Mol. Med. 2010)
    2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1, 2 Ota T.... Sugano S. (Nat. Genet. 2004)
    3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S.... Malek J. (Genome Res. 2004)
    4. Exploring proteomes and analyzing protein processing by mass spectrometric identification of sorted N-terminal peptides. (PubMed id 12665801)1, 2 Gevaert K.... Vandekerckhove J. (Nat. Biotechnol. 2003)
    5. Prediction of the coding sequences of unidentified human genes. XII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro. (PubMed id 10048485)1, 2 Nagase T.... Ohara O. (DNA Res. 1998)
    6. VCP phosphorylation-dependent interaction partners prevent apoptosis in Helicobacter pylori-infected gastric epithelial cells. (PubMed id 23383273)1 Yu C.C....Chow L.P. (PLoS ONE 2013)
    7. Interlaboratory reproducibility of large-scale human protein-complex analysis by standardized AP-MS. (PubMed id 23455922)1 Varjosalo M....Superti-Furga G. (Nat. Methods 2013)
    8. The SOX2-interactome in brain cancer cells identifies the requirement of MSI2 and USP9X for the growth of brain tumor cells. (PubMed id 23667531)1 Cox J.L....Rizzino A. (PLoS ONE 2013)
    9. A census of human soluble protein complexes. (PubMed id 22939629)1 Havugimana P.C....Emili A. (Cell 2012)
    10. Comparative large scale characterization of plant versus mammal proteins reveals similar and idiosyncratic N-I+-acetylation features. (PubMed id 22223895)2 Bienvenut W.V....Giglione C. (amp 2012)

    (in PubMed, OMIM, and NCBI Bookshelf)
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     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
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    Entrez Gene: 23256 HGNC: 20726 AceView: SCFD1 Ensembl:ENSG00000092108 euGenes: HUgn23256
    ECgene: SCFD1 H-InvDB: SCFD1

    (According to HUGE)
    About This Section

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    HUGE: KIAA0917

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL, and/or others, e.g. Wikipedia and GeneReviews, via UniProtKB/Swiss-Prot)
    About This Section

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    NameDescription
    PharmGKB entry for SCFD1 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section

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    Patent Information for SCFD1 gene:
    Search GeneIP for patents involving SCFD1

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Cloud-Clone Corp., Thermo Fisher Scientific, eBioscience, antibodies-online, and/or others, Gene Editing from DNA2.0. Clones from OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Addgene, Cell lines from GenScript, and ESI BIO, Flow cytometery from eBioscience, PCR Arrays from QIAGEN, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, Enzo Life Sciences, and/or ApexBio, In Situ Hybridization Assays from
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