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Aliases for SCEL-AS1 Gene

Subcategory (RNA class) for SCEL-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for SCEL-AS1 Gene

  • SCEL Antisense RNA 1 2 3 5
  • SCEL Antisense RNA 1 (Non-Protein Coding) 2

External Ids for SCEL-AS1 Gene

Previous GeneCards Identifiers for SCEL-AS1 Gene

  • GC00U933659
  • GC13M078174

Summaries for SCEL-AS1 Gene

GeneCards Summary for SCEL-AS1 Gene

SCEL-AS1 (SCEL Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SCEL-AS1 Gene

Genomics for SCEL-AS1 Gene

Regulatory Elements for SCEL-AS1 Gene

Enhancers for SCEL-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH13F077584 0.6 FANTOM5 11 +22.3 22255 0.2 SLAIN1 SCEL-AS1 EDNRB MYCBP2 SCEL
GH13F077751 0.4 ENCODE 10.8 -145.5 -145453 0.7 HDGF CTCF WRNIP1 MAX ZNF384 RAD21 ZNF547 ZNF143 SMC3 ZNF654 SCEL-AS1 GC13M077708 EDNRB-AS1
GH13F077515 1.5 FANTOM5 Ensembl ENCODE 10.7 +90.1 90123 1.0 JUND IKZF1 JUN EED JUNB SCEL-AS1 SCEL LOC105370271
GH13F077558 1.1 Ensembl ENCODE 10.5 +47.8 47751 1.2 MTA2 JUNB TBX21 CTBP1 GATA3 EED IKZF1 NBN ETV6 MLLT1 SCEL-AS1 SCEL
GH13F077544 0.7 Ensembl ENCODE 10.2 +61.9 61851 0.6 MTA2 SPI1 SCEL-AS1 SCEL
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around SCEL-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for SCEL-AS1 Gene

77,599,755 bp from pter
77,606,551 bp from pter
6,797 bases
Minus strand

Genomic View for SCEL-AS1 Gene

Genes around SCEL-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SCEL-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SCEL-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SCEL-AS1 Gene

Proteins for SCEL-AS1 Gene

Post-translational modifications for SCEL-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SCEL-AS1 Gene

Domains & Families for SCEL-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SCEL-AS1 Gene

Function for SCEL-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SCEL-AS1 Gene

Localization for SCEL-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SCEL-AS1 Gene

Pathways & Interactions for SCEL-AS1 Gene

SuperPathways for SCEL-AS1 Gene

No Data Available

Interacting Proteins for SCEL-AS1 Gene

Gene Ontology (GO) - Biological Process for SCEL-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for SCEL-AS1 Gene

Transcripts for SCEL-AS1 Gene

mRNA/cDNA for SCEL-AS1 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SCEL-AS1 Gene

No ASD Table

Relevant External Links for SCEL-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SCEL-AS1 Gene

mRNA expression in normal human tissues for SCEL-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for SCEL-AS1 Gene

This gene is overexpressed in Esophagus - Mucosa (x21.2), Skin - Sun Exposed (Lower leg) (x8.3), Skin - Not Sun Exposed (Suprapubic) (x7.8), Vagina (x6.0), and Cervix - Ectocervix (x4.1).
genes like me logo Genes that share expression patterns with SCEL-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for SCEL-AS1 Gene

Orthologs for SCEL-AS1 Gene

Evolution for SCEL-AS1 Gene

Gene Tree for SCEL-AS1 (if available)
Gene Tree for SCEL-AS1 (if available)

No data available for Orthologs for SCEL-AS1 Gene

Paralogs for SCEL-AS1 Gene

No data available for Paralogs for SCEL-AS1 Gene

Variants for SCEL-AS1 Gene

Sequence variations from dbSNP and Humsavar for SCEL-AS1 Gene

SNP ID Clin Chr 13 pos Sequence Context AA Info Type
rs1040999 -- 77,601,661(-) TACTT(C/T)GAGAA intron-variant
rs111609781 -- 77,599,848(+) GCTGG(C/T)GGAAT intron-variant, nc-transcript-variant
rs111640185 -- 77,608,287(+) TCCTT(A/T)GTTAT intron-variant, upstream-variant-2KB
rs112097502 -- 77,602,051(+) TTCCC(C/T)CAATG intron-variant
rs112501433 -- 77,606,330(+) GTATG(C/T)GTAGT intron-variant

Relevant External Links for SCEL-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SCEL-AS1 Gene

Disorders for SCEL-AS1 Gene

Relevant External Links for SCEL-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for SCEL-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SCEL-AS1 Gene

Publications for SCEL-AS1 Gene

No publications were found for SCEL-AS1 Gene.

Products for SCEL-AS1 Gene

Sources for SCEL-AS1 Gene

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