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Aliases for SCARNA8 Gene

Subcategory (RNA class) for SCARNA8 Gene


Quality Score for this RNA gene is


Aliases for SCARNA8 Gene

  • Small Cajal Body-Specific RNA 8 2 3
  • U92 3

External Ids for SCARNA8 Gene

Previous GeneCards Identifiers for SCARNA8 Gene

  • GC09M019055
  • GC09M019065

Summaries for SCARNA8 Gene

GeneCards Summary for SCARNA8 Gene

SCARNA8 (Small Cajal Body-Specific RNA 8) is an RNA Gene, and is affiliated with the scaRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SCARNA8 Gene

Genomics for SCARNA8 Gene

Regulatory Elements for SCARNA8 Gene

Genomic Location for SCARNA8 Gene

19,063,656 bp from pter
19,063,786 bp from pter
131 bases
Minus strand

Genomic View for SCARNA8 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SCARNA8 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SCARNA8 Gene

Proteins for SCARNA8 Gene

Post-translational modifications for SCARNA8 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SCARNA8 Gene

Domains for SCARNA8 Gene

Gene Families for SCARNA8 Gene

  • SCARNA :ncRNAs / Small nucleolar RNAs : Small cajal body-specific

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SCARNA8: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SCARNA8 Gene

Function for SCARNA8 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SCARNA8 Gene

Localization for SCARNA8 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SCARNA8 Gene

Pathways for SCARNA8 Gene

SuperPathways for SCARNA8 Gene

No Data Available

Interacting Proteins for SCARNA8 Gene

Gene Ontology (GO) - Biological Process for SCARNA8 Gene


No data available for Pathways by source for SCARNA8 Gene

Transcripts for SCARNA8 Gene

mRNA/cDNA for SCARNA8 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for SCARNA8

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for SCARNA8 Gene

No ASD Table

Relevant External Links for SCARNA8 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SCARNA8 Gene

mRNA expression in normal human tissues for SCARNA8 Gene

SOURCE GeneReport for Unigene cluster for SCARNA8 Gene Hs.689635

genes like me logo Genes that share expressions with SCARNA8: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for SCARNA8 Gene

Orthologs for SCARNA8 Gene

This gene was present in the common ancestor of chordates.

Orthologs for SCARNA8 Gene

Organism Taxonomy Gene Similarity Type Details
(Mus musculus)
Mammalia Scarna8 16
Scarna8 36
  • 84 (a)
(Bos Taurus)
Mammalia SCARNA8 36
  • 93 (a)
(Canis familiaris)
Mammalia SCARNA8 36
  • 93 (a)
(Monodelphis domestica)
Mammalia SCARNA8 36
  • 69 (a)
(Ornithorhynchus anatinus)
Mammalia SCARNA8 36
  • 91 (a)
(Pan troglodytes)
Mammalia SCARNA8 36
  • 99 (a)
(Gallus gallus)
Aves SCARNA8 36
  • 86 (a)
(Anolis carolinensis)
Reptilia SCARNA8 36
  • 79 (a)
(Danio rerio)
Actinopterygii SCARNA8 36
  • 72 (a)
Species with no ortholog for SCARNA8:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SCARNA8 Gene

Gene Tree for SCARNA8 (if available)
Gene Tree for SCARNA8 (if available)

Paralogs for SCARNA8 Gene

No data available for Paralogs for SCARNA8 Gene

Variants for SCARNA8 Gene

Structural Variations from Database of Genomic Variants (DGV) for SCARNA8 Gene

Variant ID Type Subtype PubMed ID
nsv892700 CNV Gain 21882294

Relevant External Links for SCARNA8 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for SCARNA8 Gene

Disorders for SCARNA8 Gene

Relevant External Links for SCARNA8

Genetic Association Database (GAD)

No disorders were found for SCARNA8 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships and Genatlas for SCARNA8 Gene

Publications for SCARNA8 Gene

  1. Cajal body-specific small nuclear RNAs: a novel class of 2'-O-methylation and pseudouridylation guide RNAs. (PMID: 12032087) Darzacq X. … Kiss T. (EMBO J. 2002) 2 3
  2. hNaf1 is required for accumulation of human box H/ACA snoRNPs, scaRNPs, and telomerase. (PMID: 16601202) Hoareau-Aveilla C. … Henry Y. (RNA 2006) 3

Products for SCARNA8 Gene

Sources for SCARNA8 Gene

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