Free for academic non-profit institutions. Other users need a Commercial license

Aliases for SCARNA27 Gene

Subcategory (RNA class) for SCARNA27 Gene

non-coding RNA

Quality Score for this RNA gene is

2

Aliases for SCARNA27 Gene

  • Small Cajal Body-Specific RNA 27 2 3

External Ids for SCARNA27 Gene

Previous GeneCards Identifiers for SCARNA27 Gene

  • GC06U901085

Summaries for SCARNA27 Gene

GeneCards Summary for SCARNA27 Gene

SCARNA27 (Small Cajal Body-Specific RNA 27) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SCARNA27 Gene

Genomics for SCARNA27 Gene

Regulatory Elements for SCARNA27 Gene

Genomic Location for SCARNA27 Gene

Start:
8,086,408 bp from pter
End:
8,086,533 bp from pter
Size:
126 bases
Orientation:
Minus strand

Genomic View for SCARNA27 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SCARNA27 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SCARNA27 Gene

Proteins for SCARNA27 Gene

Post-translational modifications for SCARNA27 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SCARNA27 Gene

Domains for SCARNA27 Gene

Gene Families for SCARNA27 Gene

HGNC:
  • SCARNA :ncRNAs / Small nucleolar RNAs : Small cajal body-specific

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SCARNA27: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SCARNA27 Gene

Function for SCARNA27 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SCARNA27 Gene

Localization for SCARNA27 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SCARNA27 Gene

Pathways for SCARNA27 Gene

SuperPathways for SCARNA27 Gene

No Data Available

Interacting Proteins for SCARNA27 Gene

Gene Ontology (GO) - Biological Process for SCARNA27 Gene

None

No data available for Pathways by source for SCARNA27 Gene

Transcripts for SCARNA27 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for SCARNA27 Gene

No ASD Table

Relevant External Links for SCARNA27 Gene

GeneLoc Exon Structure for
SCARNA27
ECgene alternative splicing isoforms for
SCARNA27

No data available for mRNA/cDNA for SCARNA27 Gene

Expression for SCARNA27 Gene

No Expression Related Data Available

In Situ Assay Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for SCARNA27 Gene

Orthologs for SCARNA27 Gene

No data available for Orthologs and Evolution for SCARNA27 Gene

Paralogs for SCARNA27 Gene

No data available for Paralogs for SCARNA27 Gene

Variants for SCARNA27 Gene

Structural Variations from Database of Genomic Variants (DGV) for SCARNA27 Gene

Variant ID Type Subtype PubMed ID
esv2731544 CNV Deletion 23290073

Relevant External Links for SCARNA27 Gene

HapMap Linkage Disequilibrium report
SCARNA27

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for SCARNA27 Gene

Disorders for SCARNA27 Gene

Relevant External Links for SCARNA27

Genetic Association Database (GAD)
SCARNA27

No disorders were found for SCARNA27 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships and Genatlas for SCARNA27 Gene

Publications for SCARNA27 Gene

  1. snoSeeker: an advanced computational package for screening of guide and orphan snoRNA genes in the human genome. (PMID: 16990247) Yang J.H. … Qu L.H. (Nucleic Acids Res. 2006) 3
  2. Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. (PMID: 22658674) Castello A. … Hentze M.W. (Cell 2012) 3
  3. Genome-wide association to body mass index and waist circumference: the Framingham Heart Study 100K project. (PMID: 17903300) Fox C.S. … Atwood L.D. (BMC Med. Genet. 2007) 48
  4. Genome-wide association of echocardiographic dimensions, brachial artery endothelial function and treadmill exercise responses in the Framingham Heart Study. (PMID: 17903301) Vasan R.S. … Benjamin E.J. (BMC Med. Genet. 2007) 48

Products for SCARNA27 Gene

Sources for SCARNA27 Gene

Back to Top

Content