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Aliases for SCARNA16 Gene

Subcategory (RNA class) for SCARNA16 Gene

scaRNA

Quality Score for this RNA gene is

3

Aliases for SCARNA16 Gene

  • Small Cajal Body-Specific RNA 16 2 3
  • ACA47 ScaRNA 3
  • ACA47 3

External Ids for SCARNA16 Gene

Previous GeneCards Identifiers for SCARNA16 Gene

  • GC17P072601
  • GC17P072602
  • GC17P072605
  • GC17P075085

Summaries for SCARNA16 Gene

GeneCards Summary for SCARNA16 Gene

SCARNA16 (Small Cajal Body-Specific RNA 16) is an RNA Gene, and is affiliated with the scaRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SCARNA16 Gene

Genomics for SCARNA16 Gene

Regulatory Elements for SCARNA16 Gene

Genomic Location for SCARNA16 Gene

Start:
77,089,307 bp from pter
End:
77,089,493 bp from pter
Size:
187 bases
Orientation:
Plus strand

Genomic View for SCARNA16 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SCARNA16 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SCARNA16 Gene

Proteins for SCARNA16 Gene

Post-translational modifications for SCARNA16 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SCARNA16 Gene

Domains for SCARNA16 Gene

Gene Families for SCARNA16 Gene

HGNC:
  • SCARNA :ncRNAs / Small nucleolar RNAs : Small cajal body-specific

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SCARNA16: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SCARNA16 Gene

Function for SCARNA16 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SCARNA16 Gene

Localization for SCARNA16 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SCARNA16 Gene

Pathways for SCARNA16 Gene

SuperPathways for SCARNA16 Gene

No Data Available

Interacting Proteins for SCARNA16 Gene

Gene Ontology (GO) - Biological Process for SCARNA16 Gene

None

No data available for Pathways by source for SCARNA16 Gene

Transcripts for SCARNA16 Gene

mRNA/cDNA for SCARNA16 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for SCARNA16

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for SCARNA16 Gene

No ASD Table

Relevant External Links for SCARNA16 Gene

GeneLoc Exon Structure for
SCARNA16
ECgene alternative splicing isoforms for
SCARNA16

Expression for SCARNA16 Gene

mRNA expression in normal human tissues for SCARNA16 Gene

genes like me logo Genes that share expressions with SCARNA16: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for SCARNA16 Gene

Orthologs for SCARNA16 Gene

Evolution for SCARNA16 Gene

ENSEMBL:
Gene Tree for SCARNA16 (if available)
TreeFam:
Gene Tree for SCARNA16 (if available)

No data available for Orthologs for SCARNA16 Gene

Paralogs for SCARNA16 Gene

No data available for Paralogs for SCARNA16 Gene

Variants for SCARNA16 Gene

Relevant External Links for SCARNA16 Gene

HapMap Linkage Disequilibrium report
SCARNA16

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for SCARNA16 Gene

Disorders for SCARNA16 Gene

No disorders were found for SCARNA16 Gene.

No data available for UniProtKB/Swiss-Prot for SCARNA16 Gene

Publications for SCARNA16 Gene

  1. Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. (PMID: 22658674) Castello A. … Hentze M.W. (Cell 2012) 3

Products for SCARNA16 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate SCARNA16
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for SCARNA16
    • Block miRNA regulation of SCARNA16 using miScript Target Protectors

    Sources for SCARNA16 Gene

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