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Aliases for SCARNA15 Gene

Subcategory (RNA class) for SCARNA15 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for SCARNA15 Gene

  • Small Cajal Body-Specific RNA 15 2 3 5
  • ACA45 ScaRNA 3
  • ACA45 3

External Ids for SCARNA15 Gene

Previous GeneCards Identifiers for SCARNA15 Gene

  • GC15P081224
  • GC15P083425
  • GC15P082760
  • GC15P082767

Summaries for SCARNA15 Gene

GeneCards Summary for SCARNA15 Gene

SCARNA15 (Small Cajal Body-Specific RNA 15) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SCARNA15 Gene

Genomics for SCARNA15 Gene

Regulatory Elements for SCARNA15 Gene

Enhancers for SCARNA15 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around SCARNA15 on UCSC Golden Path with GeneCards custom track

Genomic Location for SCARNA15 Gene

Chromosome:
15
Start:
82,752,884 bp from pter
End:
82,757,208 bp from pter
Size:
4,325 bases
Orientation:
Plus strand

Genomic View for SCARNA15 Gene

Genes around SCARNA15 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SCARNA15 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SCARNA15 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SCARNA15 Gene

Proteins for SCARNA15 Gene

Post-translational modifications for SCARNA15 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SCARNA15 Gene

Domains & Families for SCARNA15 Gene

Gene Families for SCARNA15 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SCARNA15: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SCARNA15 Gene

Function for SCARNA15 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SCARNA15 Gene

Localization for SCARNA15 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SCARNA15 Gene

Pathways & Interactions for SCARNA15 Gene

SuperPathways for SCARNA15 Gene

No Data Available

Interacting Proteins for SCARNA15 Gene

Gene Ontology (GO) - Biological Process for SCARNA15 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SCARNA15 Gene

Drugs & Compounds for SCARNA15 Gene

No Compound Related Data Available

Transcripts for SCARNA15 Gene

mRNA/cDNA for SCARNA15 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SCARNA15 Gene

No ASD Table

Relevant External Links for SCARNA15 Gene

GeneLoc Exon Structure for
SCARNA15
ECgene alternative splicing isoforms for
SCARNA15

Expression for SCARNA15 Gene

SOURCE GeneReport for Unigene cluster for SCARNA15 Gene Hs.743895

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for SCARNA15 Gene

Orthologs for SCARNA15 Gene

Evolution for SCARNA15 Gene

ENSEMBL:
Gene Tree for SCARNA15 (if available)
TreeFam:
Gene Tree for SCARNA15 (if available)

No data available for Orthologs for SCARNA15 Gene

Paralogs for SCARNA15 Gene

No data available for Paralogs for SCARNA15 Gene

Variants for SCARNA15 Gene

Structural Variations from Database of Genomic Variants (DGV) for SCARNA15 Gene

Variant ID Type Subtype PubMed ID
esv34318 CNV Loss 17911159
esv2674021 CNV Deletion 23128226
nsv817702 CNV Loss 17921354
nsv469557 CNV Complex 16826518
nsv471687 CNV Gain 15918152

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Variation tolerance and Relevant External Links for SCARNA15 Gene

Disorders for SCARNA15 Gene

Relevant External Links for SCARNA15

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SCARNA15

No disorders were found for SCARNA15 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SCARNA15 Gene

Publications for SCARNA15 Gene

  1. A human snoRNA with microRNA-like functions. (PMID: 19026782) Ender C. … Meister G. (Mol. Cell 2008) 3 67

Products for SCARNA15 Gene

Sources for SCARNA15 Gene

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