Aliases for SCARNA14 Gene
Subcategory (RNA class) for SCARNA14 Gene
scaRNA
Quality Score for this RNA gene is
3
External Ids for SCARNA14 Gene
- HGNC: 32571
- Entrez Gene: 692149
- Ensembl: ENSG00000252712
Previous GeneCards Identifiers for SCARNA14 Gene
- GC15U900549
- GC15M064429
- GC15M066639
- GC15M043475
Summaries for SCARNA14 Gene
GeneCards Summary for SCARNA14 Gene
SCARNA14 (Small Cajal Body-Specific RNA 14) is an RNA Gene, and is affiliated with the scaRNA class.
Additional gene information for SCARNA14 Gene
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SCARNA14 Gene
Genomics for SCARNA14 Gene
GeneHancer (GH) Regulatory Elements for SCARNA14 Gene
Regulatory Element Products
Genomic Locations for SCARNA14 Gene
Genomic Locations for SCARNA14 Gene
- chr15:66,347,206-66,347,342
- (GRCh38/hg38)
- Size:
- 137 bases
- Orientation:
- Minus strand
- chr15:66,639,544-66,639,680
- (GRCh37/hg19)
Genomic View for SCARNA14 Gene
Genes around SCARNA14 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 15q22.31 by Ensembl
- 15q22.31 by Entrez Gene
- 15q22.31 by HGNC
SCARNA14 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for SCARNA14 Gene
Proteins for SCARNA14 Gene
Post-translational modifications for SCARNA14 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for SCARNA14
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for SCARNA14
- Origene Custom Protein Services for SCARNA14
- Search GeneTex for Proteins for SCARNA14
No data available for DME Specific Peptides for SCARNA14 Gene
Domains & Families for SCARNA14 Gene
Gene Families for SCARNA14 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SCARNA14 Gene
Function for SCARNA14 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for SCARNA14
-
- Search ViGene Biosciences for SCARNA14
CRISPR Products
- Browse CRISPR knockouts for SCARNA14
- Applied Biological Materials CRISPR for SCARNA14
-
Vectors and viruses for KO, Activation, Repression, and more
miRNA Products
- Search ViGene Biosciences for SCARNA14
Inhibitory RNA Products
- Search ViGene Biosciences for SCARNA14
Clone Products
- GenScript: Custom all cDNA clones Services for SCARNA14
- VectorBuilder custom plasmid, inducible vectors for SCARNA14
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for SCARNA14
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Applied Biological Materials Clones for SCARNA14
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SCARNA14 Gene
Localization for SCARNA14 Gene
| Compartment | Confidence |
|---|---|
| cytosol | 2 |
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SCARNA14 Gene
Transcripts for SCARNA14 Gene
mRNA/cDNA for SCARNA14 Gene
- (1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
CRISPR Products
- Browse CRISPR knockouts for SCARNA14
- Applied Biological Materials CRISPR for SCARNA14
-
Vectors and viruses for KO, Activation, Repression, and more
miRNA Products
- Search ViGene Biosciences for SCARNA14
Inhibitory RNA Products
- Search ViGene Biosciences for SCARNA14
Clone Products
- GenScript: Custom all cDNA clones Services for SCARNA14
- VectorBuilder custom plasmid, inducible vectors for SCARNA14
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for SCARNA14
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Applied Biological Materials Clones for SCARNA14
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
Expression for SCARNA14 Gene
NURSA nuclear receptor signaling pathways regulating expression of SCARNA14 Gene:
SCARNA14Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SCARNA14 Gene
Orthologs for SCARNA14 Gene
This gene was present in the common ancestor of chordates.
| Organism | Taxonomy | Gene | Similarity | Type | Details |
|---|---|---|---|---|---|
| chimpanzee (Pan troglodytes) |
Mammalia | SCARNA14 34 |
|
OneToOne | |
| dog (Canis familiaris) |
Mammalia | SCARNA14 34 |
|
OneToOne | |
| cow (Bos Taurus) |
Mammalia | SCARNA14 34 |
|
OneToOne | |
| mouse (Mus musculus) |
Mammalia | Gm24289 34 |
|
OneToMany | |
| Gm23505 34 |
|
OneToMany | |||
| Gm22433 34 |
|
OneToMany | |||
| oppossum (Monodelphis domestica) |
Mammalia | SCARNA14 34 |
|
OneToOne | |
| platypus (Ornithorhynchus anatinus) |
Mammalia | SCARNA14 34 |
|
OneToOne | |
| chicken (Gallus gallus) |
Aves | SCARNA14 34 |
|
OneToOne | |
| lizard (Anolis carolinensis) |
Reptilia | SCARNA14 34 |
|
OneToOne | |
| zebrafish (Danio rerio) |
Actinopterygii | SCARNA14 34 34 34 |
|
OneToMany |
- Species where no ortholog for SCARNA14 was found in the sources mined by GeneCards:
-
- A. gosspyii yeast (Ashbya gossypii)
- Actinobacteria (Mycobacterium tuberculosis)
- African clawed frog (Xenopus laevis)
- African malaria mosquito (Anopheles gambiae)
- Alicante grape (Vitis vinifera)
- alpha proteobacteria (Wolbachia pipientis)
- amoeba (Dictyostelium discoideum)
- Archea (Pyrococcus horikoshii)
- baker's yeast (Saccharomyces cerevisiae)
- barley (Hordeum vulgare)
- beta proteobacteria (Neisseria meningitidis)
- bread mold (Neurospora crassa)
- Chromalveolata (Phytophthora infestans)
- common water flea (Daphnia pulex)
- corn (Zea mays)
- E. coli (Escherichia coli)
- filamentous fungi (Aspergillus nidulans)
- Firmicute bacteria (Streptococcus pneumoniae)
- fission yeast (Schizosaccharomyces pombe)
- fruit fly (Drosophila melanogaster)
- green algae (Chlamydomonas reinhardtii)
- honey bee (Apis mellifera)
- K. lactis yeast (Kluyveromyces lactis)
- loblloly pine (Pinus taeda)
- malaria parasite (Plasmodium falciparum)
- medicago trunc (Medicago Truncatula)
- moss (Physcomitrella patens)
- orangutan (Pongo pygmaeus)
- pig (Sus scrofa)
- rainbow trout (Oncorhynchus mykiss)
- rat (Rattus norvegicus)
- rice (Oryza sativa)
- rice blast fungus (Magnaporthe grisea)
- schistosome parasite (Schistosoma mansoni)
- sea anemone (Nematostella vectensis)
- sea squirt (Ciona intestinalis)
- sea squirt (Ciona savignyi)
- sea urchin (Strongylocentrotus purpuratus)
- sorghum (Sorghum bicolor)
- soybean (Glycine max)
- stem rust fungus (Puccinia graminis)
- sugarcane (Saccharum officinarum)
- thale cress (Arabidopsis thaliana)
- tomato (Lycopersicon esculentum)
- toxoplasmosis (Toxoplasma gondii)
- Trichoplax (Trichoplax adhaerens)
- tropical clawed frog (Silurana tropicalis)
- wheat (Triticum aestivum)
- worm (Caenorhabditis elegans)
Paralogs for SCARNA14 Gene
No data available for Paralogs for SCARNA14 Gene
Variants for SCARNA14 Gene
| SNP ID | Clin | Chr 15 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs1000185322 | -- | 66,347,561(-) | T/C | upstream_transcript_variant | |
| rs1000973466 | -- | 66,348,210(-) | T/C | upstream_transcript_variant | |
| rs1002381611 | -- | 66,349,228(-) | G/A | upstream_transcript_variant | |
| rs1006438957 | -- | 66,346,935(-) | G/C | downstream_transcript_variant | |
| rs1006491253 | -- | 66,347,106(-) | C/A | downstream_transcript_variant |
| Variant ID | Type | Subtype | PubMed ID |
|---|---|---|---|
| nsv1047588 | CNV | loss | 25217958 |
| nsv833045 | CNV | gain | 17160897 |
Additional Variant Information for SCARNA14 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- SCARNA14
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SCARNA14 Gene
Disorders for SCARNA14 Gene
Additional Disease Information for SCARNA14
No disorders were found for SCARNA14 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SCARNA14 Gene
Publications for SCARNA14 Gene
- Identification of 13 novel human modification guide RNAs. (PMID: 14602913) Vitali P … Cavaillé J (Nucleic acids research 2003) 2 3 58
- A computational screen for mammalian pseudouridylation guide H/ACA RNAs. (PMID: 16373490) Schattner P … Lowe TM (RNA (New York, N.Y.) 2006) 3 58
Products for SCARNA14 Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Primary Antibodies
- Browse Proteins and Enzymes
- Browse ELISAs
- Browse Activity Assays
- Browse cDNA Clones
- Browse Cell Culture Products
- Browse Cell Selection and Detection Kits
- Browse DNA Damage and Repair Kits
- Browse ELISpot/FluoroSpot Kits and Development Modules
- Browse Flow Cytometry Kits
- Browse Immunoprecipitation Assays
- Browse Luminex Assays
- Browse Peptides
- Browse Proteome Profiler Antibody Arrays
- Browse Small Molecules
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for SCARNA14
- Origene Custom Protein Services for SCARNA14
- Browse OriGene Inhibitory RNA Products For SCARNA14
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for SCARNA14
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For SCARNA14
- GenScript: Custom all cDNA clones Services for SCARNA14
- GenScript Custom Purified and Recombinant Proteins Services for SCARNA14
- GenScript Custom Assay Services for SCARNA14
- GenScript Custom overexpressing Cell Line Services for SCARNA14
- Browse GenScript CRISPR for SCARNA14
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
- Gene Synthesis: Any Gene in Any Vector
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- Gene Mutant Library, Variants up to 10^11
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- Browse Sino Biological cDNA Clones
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- Sino Biological Transfection Reagent
- Sino Biological Anti-His Tag Antibody
- Novus Biologicals
- Novus Biologicals Tissue Microarrays
- Browse Antibodies at Cloud-Clone Corp.
- Browse Proteins at Cloud-Clone Corp.
- Browse Assay Kits at Cloud-Clone Corp.
- Browse Knockouts at Cloud-Clone Corp.
- Browse Knockins at Cloud-Clone Corp.
- Cloud-Clone Corp. disease models service
- Browse cDNA clones at Cloud-Clone Corp.
- Browse primers at Cloud-Clone Corp.
- Cloud-Clone Corp. primary cells service
- Cyagen custom Knockout/knockin (KOKI) mouse models for SCARNA14
- VectorBuilder custom plasmid, inducible vectors for SCARNA14
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for SCARNA14
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Search GeneTex for Antibodies for SCARNA14
- Search GeneTex for Proteins for SCARNA14
Sources for SCARNA14 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
- (87) BioSystems
- (88) MaxQB
- (89) IUPHAR
- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
- (93) HOMER
- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
- (106) GTEx
- (107) ProteomicsDB
- (108) SCBT
- (109) DGIdb
- (110) ClinicalTrials
- (111) FDA Approved Drugs
- (112) RVIS
- (113) SIGNOR
- (114) diseasecard
- (115) NIH Rare Diseases
- (116) Orphanet
- (117) UMLS
- (118) GTR
- (119) Disease Ontology
- (120) Genetics Home Reference
- (121) MeSH
- (122) MedlinePlus
- (123) CDC
- (124) NINDS
- (125) NCBI Bookshelf
- (126) ClinVar
- (127) Gene Damage Index
- (128) ViGene Biosciences
- (129) HPO
- (130) UDN
- (131) VISTA
- (132) FANTOM5
- (133) ENCODE
- (134) ProSci
- (135) Horizon
- (136) NURSA
- (137) IID
- (138) Cyagen
- (139) VectorBuilder
- (140) SNPedia
- (141) BRCA Exchange
- (142) St John's Lab
- (143) CIViC
- (144) ProteoGenix
- (145) dbSUPER
- (146) TISSUES
- (147) Gene ORGANizer
- (148) abm
- (149) CrownBio
- (150) Human Protein Atlas
- (151) GWAS Catalog
- (152) Monarch Initiative
- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
- (156) UCNEbase
- (157) EPDnew