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Aliases for SCAANT1 Gene

Subcategory (RNA class) for SCAANT1 Gene

non-coding RNA

Quality Score for this RNA gene is

2

Aliases for SCAANT1 Gene

  • SCA7/ATXN7 Antisense RNA 1 2 3
  • Spinocerebellar Ataxia-7 Antisense Noncoding Transcript 1 2 3
  • SCA7/ATXN7 Antisense RNA 1 (Non-Protein Coding) 2 3
  • ATXN7 Antisense RNA 1 (Non-Protein Coding) 2 3
  • ATXN7-AS1 3

External Ids for SCAANT1 Gene

Previous GeneCards Identifiers for SCAANT1 Gene

  • GC03M063911

Summaries for SCAANT1 Gene

GeneCards Summary for SCAANT1 Gene

SCAANT1 (SCA7/ATXN7 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class. Diseases associated with SCAANT1 include Spinocerebellar Ataxia 7.

Additional gene information for SCAANT1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SCAANT1 Gene

Genomics for SCAANT1 Gene

Genomic Locations for SCAANT1 Gene

Genomic Locations for SCAANT1 Gene
chr3:-
(GRCh38/hg38)
Orientation:
Unknown strand

Genomic View for SCAANT1 Gene


Cytogenetic band:
GeneLoc Logo Gene Density

No data available for Regulatory Elements and RefSeq DNA sequence for SCAANT1 Gene

Proteins for SCAANT1 Gene

Post-translational modifications for SCAANT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SCAANT1 Gene

Domains & Families for SCAANT1 Gene

Gene Families for SCAANT1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SCAANT1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SCAANT1 Gene

Function for SCAANT1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SCAANT1 Gene

Localization for SCAANT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SCAANT1 Gene

Pathways & Interactions for SCAANT1 Gene

SuperPathways for SCAANT1 Gene

No Data Available

Interacting Proteins for SCAANT1 Gene

Gene Ontology (GO) - Biological Process for SCAANT1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SCAANT1 Gene

Drugs & Compounds for SCAANT1 Gene

No Compound Related Data Available

Transcripts for SCAANT1 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SCAANT1 Gene

No ASD Table

Relevant External Links for SCAANT1 Gene

ECgene alternative splicing isoforms for
SCAANT1

No data available for mRNA/cDNA for SCAANT1 Gene

Expression for SCAANT1 Gene

NURSA nuclear receptor signaling pathways regulating expression of SCAANT1 Gene:

SCAANT1
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SCAANT1 Gene

Orthologs for SCAANT1 Gene

No data available for Orthologs and Evolution for SCAANT1 Gene

Paralogs for SCAANT1 Gene

No data available for Paralogs for SCAANT1 Gene

Variants for SCAANT1 Gene

Relevant External Links for SCAANT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SCAANT1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SCAANT1 Gene

Disorders for SCAANT1 Gene

MalaCards: The human disease database

(1) MalaCards diseases for SCAANT1 Gene - From: DISEASES and GeneCards

Disorder Aliases PubMed IDs
spinocerebellar ataxia 7
  • spinocerebellar ataxia type 7
- elite association - COSMIC cancer census association via MalaCards

Relevant External Links for SCAANT1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SCAANT1
genes like me logo Genes that share disorders with SCAANT1: view

No data available for UniProtKB/Swiss-Prot and Genatlas for SCAANT1 Gene

Publications for SCAANT1 Gene

  1. CTCF regulates ataxin-7 expression through promotion of a convergently transcribed, antisense noncoding RNA. (PMID: 21689595) Sopher BL … La Spada AR (Neuron 2011) 2 3 60
  2. The long non-coding RNAs in neurodegenerative diseases: novel mechanisms of pathogenesis. (PMID: 27338628) Riva P … Venturin M (Current Alzheimer research 2016) 3 60

Products for SCAANT1 Gene

Sources for SCAANT1 Gene

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