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Aliases for SASH1 Gene

Aliases for SASH1 Gene

  • SAM And SH3 Domain Containing 1 2 3 5
  • Proline-Glutamate Repeat-Containing Protein 3 4
  • SAM And SH3 Domain-Containing Protein 1 3
  • DJ323M4.1 3
  • KIAA0790 4
  • SH3D6A 3
  • PEPE1 4

External Ids for SASH1 Gene

Previous GeneCards Identifiers for SASH1 Gene

  • GC06P148598
  • GC06P148644
  • GC06P148705
  • GC06P148635
  • GC06P146228
  • GC06P148593

Summaries for SASH1 Gene

Entrez Gene Summary for SASH1 Gene

  • This gene encodes a scaffold protein involved in the TLR4 signaling pathway that may stimulate cytokine production and endothelial cell migration in response to invading pathogens. The encoded protein has also been described as a potential tumor suppressor that may negatively regulate proliferation, apoptosis, and invasion of cancer cells, and reduced expression of this gene has been observed in multiple human cancers. Mutations in this gene may be associated with abnormal skin pigmentation in human patients. [provided by RefSeq, Oct 2016]

GeneCards Summary for SASH1 Gene

SASH1 (SAM And SH3 Domain Containing 1) is a Protein Coding gene. Diseases associated with SASH1 include Pigmentation Defects-Palmoplantar Keratoderma-Skin Carcinoma Syndrome and Lentiginosis, Inherited Patterned. GO annotations related to this gene include protein kinase binding and protein complex scaffold. An important paralog of this gene is SASH3.

UniProtKB/Swiss-Prot for SASH1 Gene

  • May have a role in a signaling pathway. Could act as a tumor suppressor.

Gene Wiki entry for SASH1 Gene

No data available for Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SASH1 Gene

Genomics for SASH1 Gene

Regulatory Elements for SASH1 Gene

Enhancers for SASH1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06F148362 1.6 FANTOM5 Ensembl ENCODE 17.6 +173.0 173031 7.4 CTCF PKNOX1 JUN MNT RAD21 NR2F2 ZNF7 JUND POLR2A PBX2 SASH1 GC06M148368 ENSG00000224658
GH06F148293 0.9 Ensembl 11.8 +100.0 99962 0.4 SASH1 ENSG00000224658 GC06M148368
GH06F148292 0.2 Ensembl 11.8 +98.9 98861 0.2 SASH1 ENSG00000224658 GC06M148368
GH06F148296 0.6 ENCODE 11.7 +103.5 103523 0.9 PKNOX1 GATA3 HLF CEBPG PRDM10 SASH1 ENSG00000224658 GC06M148368
GH06F148304 1 FANTOM5 Ensembl ENCODE 11.5 +112.7 112687 3.3 PKNOX1 INSM2 RAD21 ZNF366 RCOR1 FOS USF2 ZNF217 MBD2 SMARCA4 ENSG00000224658 RNU6-1222P SASH1 GC06M148368
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around SASH1 on UCSC Golden Path with GeneCards custom track

Genomic Location for SASH1 Gene

Chromosome:
6
Start:
148,193,440 bp from pter
End:
148,552,050 bp from pter
Size:
358,611 bases
Orientation:
Plus strand

Genomic View for SASH1 Gene

Genes around SASH1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SASH1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SASH1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SASH1 Gene

Proteins for SASH1 Gene

  • Protein details for SASH1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    O94885-SASH1_HUMAN
    Recommended name:
    SAM and SH3 domain-containing protein 1
    Protein Accession:
    O94885
    Secondary Accessions:
    • Q5TGN5
    • Q8TAI0
    • Q9H7R7

    Protein attributes for SASH1 Gene

    Size:
    1247 amino acids
    Molecular mass:
    136653 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=BAA34510.1; Type=Erroneous initiation; Evidence={ECO:0000305}; Sequence=BAB14909.1; Type=Erroneous initiation; Evidence={ECO:0000305};

    Three dimensional structures from OCA and Proteopedia for SASH1 Gene

neXtProt entry for SASH1 Gene

Post-translational modifications for SASH1 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for SASH1 Gene

Domains & Families for SASH1 Gene

Suggested Antigen Peptide Sequences for SASH1 Gene

Graphical View of Domain Structure for InterPro Entry

O94885

UniProtKB/Swiss-Prot:

SASH1_HUMAN :
  • Contains 2 SAM (sterile alpha motif) domains.
Domain:
  • Contains 2 SAM (sterile alpha motif) domains.
  • Contains 1 SH3 domain.
genes like me logo Genes that share domains with SASH1: view

Function for SASH1 Gene

Molecular function for SASH1 Gene

UniProtKB/Swiss-Prot Function:
May have a role in a signaling pathway. Could act as a tumor suppressor.

Gene Ontology (GO) - Molecular Function for SASH1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0008022 protein C-terminus binding IDA 23776175
GO:0019901 protein kinase binding IDA 23776175
GO:0031435 mitogen-activated protein kinase kinase kinase binding IDA 23776175
GO:0032947 protein complex scaffold IDA 23776175
genes like me logo Genes that share ontologies with SASH1: view

Phenotypes for SASH1 Gene

genes like me logo Genes that share phenotypes with SASH1: view

Animal Model Products

Inhibitory RNA Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for SASH1 Gene

Localization for SASH1 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for SASH1 Gene COMPARTMENTS Subcellular localization image for SASH1 gene
Compartment Confidence
nucleus 4
cytosol 3

Gene Ontology (GO) - Cellular Components for SASH1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0043234 protein complex IMP 23776175
genes like me logo Genes that share ontologies with SASH1: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot for SASH1 Gene

Pathways & Interactions for SASH1 Gene

SuperPathways for SASH1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for SASH1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000209 protein polyubiquitination IDA 23776175
GO:0010595 positive regulation of endothelial cell migration IDA 23776175
GO:0031666 positive regulation of lipopolysaccharide-mediated signaling pathway IMP 23776175
GO:0043507 positive regulation of JUN kinase activity IMP 23776175
GO:0045766 positive regulation of angiogenesis IMP 23776175
genes like me logo Genes that share ontologies with SASH1: view

No data available for Pathways by source and SIGNOR curated interactions for SASH1 Gene

Transcripts for SASH1 Gene

Unigene Clusters for SASH1 Gene

SAM and SH3 domain containing 1:
Representative Sequences:

Inhibitory RNA Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for SASH1 Gene

ExUns: 1 ^ 2 ^ 3 ^ 4a · 4b ^ 5 ^ 6 ^ 7 ^ 8 ^ 9 ^ 10 ^ 11 ^ 12 ^ 13 ^ 14a · 14b · 14c · 14d · 14e · 14f ^ 15a · 15b ^ 16a · 16b ^ 17 ^ 18a ·
SP1: - - - - - - - - -
SP2: - - -
SP3: - - - - - -
SP4: - - -
SP5: - -
SP6: -
SP7:
SP8:
SP9:
SP10:
SP11:

ExUns: 18b ^ 19a · 19b ^ 20 ^ 21 ^ 22 ^ 23a · 23b ^ 24a · 24b
SP1: -
SP2: -
SP3:
SP4:
SP5:
SP6:
SP7:
SP8:
SP9:
SP10:
SP11:

Relevant External Links for SASH1 Gene

GeneLoc Exon Structure for
SASH1
ECgene alternative splicing isoforms for
SASH1

Expression for SASH1 Gene

mRNA expression in normal human tissues for SASH1 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Protein differential expression in normal tissues from HIPED for SASH1 Gene

This gene is overexpressed in Cervix (54.6).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MaxQB, and MOPED for SASH1 Gene



NURSA nuclear receptor signaling pathways regulating expression of SASH1 Gene:

SASH1

SOURCE GeneReport for Unigene cluster for SASH1 Gene:

Hs.193133

mRNA Expression by UniProt/SwissProt for SASH1 Gene:

O94885-SASH1_HUMAN
Tissue specificity: Expressed ubiquitously, with highest levels in lung, placenta, spleen and thymus. Down-regulated in the majority (74%) of breast tumors in comparison with corresponding normal breast epithelial tissues.
genes like me logo Genes that share expression patterns with SASH1: view

Primer Products

No data available for mRNA differential expression in normal tissues and Protein tissue co-expression partners for SASH1 Gene

Orthologs for SASH1 Gene

This gene was present in the common ancestor of chordates.

Orthologs for SASH1 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SASH1 34 35
  • 99.5 (n)
dog
(Canis familiaris)
Mammalia SASH1 34 35
  • 87.37 (n)
cow
(Bos Taurus)
Mammalia SASH1 34 35
  • 86.69 (n)
mouse
(Mus musculus)
Mammalia Sash1 34 16 35
  • 84.32 (n)
rat
(Rattus norvegicus)
Mammalia Sash1 34
  • 83.81 (n)
oppossum
(Monodelphis domestica)
Mammalia SASH1 35
  • 80 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia SASH1 35
  • 76 (a)
OneToOne
chicken
(Gallus gallus)
Aves SASH1 34 35
  • 74.48 (n)
lizard
(Anolis carolinensis)
Reptilia SASH1 35
  • 68 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia sash1 34
  • 64.69 (n)
zebrafish
(Danio rerio)
Actinopterygii sash1a 34 35
  • 63.1 (n)
SASH1 (2 of 2) 35
  • 56 (a)
OneToMany
iktdsubc_2e1 34
Species where no ortholog for SASH1 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SASH1 Gene

ENSEMBL:
Gene Tree for SASH1 (if available)
TreeFam:
Gene Tree for SASH1 (if available)

Paralogs for SASH1 Gene

Paralogs for SASH1 Gene

(3) SIMAP similar genes for SASH1 Gene using alignment to 4 proteins:

genes like me logo Genes that share paralogs with SASH1: view

Variants for SASH1 Gene

Sequence variations from dbSNP and Humsavar for SASH1 Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type
rs587781245 Likely pathogenic 148,533,885(+) AAGAC(A/G)AGGAG reference, missense
rs1000974 -- 148,534,415(-) AGAGC(G/T)ATTAA intron-variant
rs10081095 -- 148,211,298(+) gggca(C/T)ggtgg intron-variant
rs10214728 -- 148,266,946(+) AAAGC(C/T)GGAGA intron-variant
rs10214783 -- 148,338,934(+) CAGGA(A/G)GGGGA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for SASH1 Gene

Variant ID Type Subtype PubMed ID
esv1980460 CNV deletion 18987734
esv24659 CNV loss 19812545
esv2732847 CNV deletion 23290073
esv275352 CNV loss 21479260
esv3303424 CNV mobile element insertion 20981092
esv3308235 CNV mobile element insertion 20981092
esv3338925 CNV insertion 20981092
esv3391758 CNV insertion 20981092
esv3436541 CNV insertion 20981092
esv3571444 CNV loss 25503493
esv3571445 CNV loss 25503493
esv3571446 CNV loss 25503493
esv3611190 CNV loss 21293372
esv3611191 CNV loss 21293372
nsv1073593 CNV deletion 25765185
nsv1116558 OTHER inversion 24896259
nsv1124129 CNV deletion 24896259
nsv1132022 CNV deletion 24896259
nsv1137160 CNV deletion 24896259
nsv1151525 CNV deletion 26484159
nsv520615 CNV gain 19592680
nsv5528 CNV deletion 18451855
nsv5529 CNV deletion 18451855
nsv604843 CNV loss 21841781
nsv830841 CNV loss 17160897

Variation tolerance for SASH1 Gene

Residual Variation Intolerance Score: 36.1% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 12.41; 94.26% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for SASH1 Gene

Human Gene Mutation Database (HGMD)
SASH1
SNPedia medical, phenotypic, and genealogical associations of SNPs for
SASH1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for SASH1 Gene

Disorders for SASH1 Gene

MalaCards: The human disease database

(3) MalaCards diseases for SASH1 Gene - From: Orphanet and DISEASES

- elite association - COSMIC cancer census association via MalaCards
Search SASH1 in MalaCards View complete list of genes associated with diseases

Relevant External Links for SASH1

Genetic Association Database (GAD)
SASH1
Human Genome Epidemiology (HuGE) Navigator
SASH1
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SASH1
genes like me logo Genes that share disorders with SASH1: view

No data available for UniProtKB/Swiss-Prot and Genatlas for SASH1 Gene

Publications for SASH1 Gene

  1. SASH1 - a candidate tumour suppressor gene on chromosome 6q24.3 is downregulated in breast cancer. (PMID: 12771949) Zeller C. … Scherneck S. (Oncogene 2003) 2 3 4 64
  2. Prediction of the coding sequences of unidentified human genes. XI. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro. (PMID: 9872452) Nagase T. … Ohara O. (DNA Res. 1998) 2 3 4 64
  3. A genome-wide association study for diabetic nephropathy genes in African Americans. (PMID: 21150874) McDonough C.W. … Bowden D.W. (Kidney Int. 2011) 3 46 64
  4. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PMID: 20379614) Rose J.E. … Uhl G.R. (Mol. Med. 2010) 3 46 64
  5. Variation at the NFATC2 locus increases the risk of thiazolidinedione-induced edema in the Diabetes REduction Assessment with ramipril and rosiglitazone Medication (DREAM) study. (PMID: 20628086) Bailey S.D. … Anand S. (Diabetes Care 2010) 3 46 64

Products for SASH1 Gene

Sources for SASH1 Gene

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