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Aliases & Descriptions for SAPS3
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| C11orf23 2, 3, 5 | | DKFZp781E17107 1, 2 | | DKFZp781E2374 1, 2 | | DKFZp781O2362 1, 2 | | FLJ11058 1, 2 | | FLJ43065 1, 2 | | KIAA1558 1, 2, 3, 5 | | MGC125711 1, 2 | | MGC125712 1, 2 | | PP6R3 1, 2, 3, 5 | | SAP190 1, 2 | | SAPL 1, 2, 3 | | SAPLa 1, 2 |
| | | Descriptions |
|---|
| SAPS domain family member 3 3 | | SAPS domain family, member 3 2 | | Sporulation-induced transcript 4-associated protein SAPL 3 | | chromosome 11 open reading frame 23 1 | | protein phosphatase 6 regulatory subunit 3 2 | | sporulation-induced transcript 4-associated protein 2 |
|
| | Search outside databases for aliases for SAPS3 gene |
Summaries for SAPS3(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for SAPS3: Protein phosphatase regulatory subunits, such as SAPS3, modulate the activity of protein phosphatase catalytic subunits by restricting substrate specificity, recruiting substrates, and determining the intracellular localization of the holoenzyme. SAPS3 is a regulatory subunit for the protein phosphatase-6 catalytic subunit (PPP6C; MIM 300141) (Stefansson and Brautigan, 2006 [PubMed 16769727]).[supplied by OMIM] UniProtKB/Swiss-Prot: SAPS3_HUMAN, Q5H9R7Function: Regulatory subunit of protein phospatase 6 (PP6). May function as a scaffolding PP6 subunit. May have an important role in maintaining immune self-tolerance |
Genomic Location for SAPS3
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the SAPS3 gene 
Entrez Gene cytogenetic band: 11q13 Ensembl cytogenetic band: 11q13.2 HGNC cytogenetic band: 11q13SAPS3 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 11 GeneLoc Exon Structure GeneLoc location for GC11P067985:
(about GC identifiers)
Start:
|
67,984,775 bp from pter |
End:
|
68,139,378 bp from pter |
Size:
|
154,604 bases |
Orientation:
|
plus strand |
RefSeq DNA sequence:- NC_000011.8 NT_033903.7
| Proteins for SAPS3
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: SAPS3_HUMAN, Q5H9R7 (See
protein sequence)Recommended Name: Serine/threonine-protein phosphatase 6 regulatory subunit 3 Size: 873 amino acids; 97669 Da
Subunit: Protein phospatase 6 (PP6) holoenzyme is proposed to be a heterotrimeric complex formed by the catalytic subunit, a SAPS domain-containing subunit (PP6R) and an ankyrin repeat-domain containing regulatory subunit (ARS). Interacts with PPP6C and ANKRD28
Subcellular location: Cytoplasm. Nucleus
Secondary accessions: Q3B7I1 Q3I4Y0 Q3KR35 Q68CR3 Q7L4R8 Q8N3B2 Q96MB2 Q9H2K5 Q9H2K6 Q9HCL4 Q9NUY3Alternative splicing: 6 isoforms: Q5H9R7-1 Q5H9R7-2 Q5H9R7-3 Q5H9R7-4 Q5H9R7-5 Q5H9R7-6 Post-translational modifications:
Phosphorylated upon DNA damage, probably by ATM or ATR1
View phosphorylation sites using PhosphoSite2
REFSEQ proteins: NP_060782.2
ENSEMBL proteins: ENSP00000377388 ENSP00000265637 ENSP00000377390 ENSP00000265636 ENSP00000377389
Human Recombinant Proteins               OriGene Purified Recombinant Human Protein: SAPS3 
2 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for SAPS3: Assays for SAPS3: | Protein
Domains/ Families for SAPS3(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry Q5H9R7
ProtoNet protein and cluster: Q5H9R7 1 Blocks protein family: IPB007587 SIT4 phosphatase-associated protein
UniProtKB/Swiss-Prot: SAPS3_HUMAN, Q5H9R7Similarity: Belongs to the SAPS family | Gene Function for SAPS3
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_018312
Applied Biosystems Silencer® siRNAs for SAPS3
Sigma-Aldrich siRNA and siRNA Panels for SAPS3  Sigma-Aldrich shRNA for SAPS3  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_018312                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_018312                                  untagged cDNA clone in CMV expression vector: NM_018312 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_018312
UniProtKB/Swiss-Prot: SAPS3_HUMAN, Q5H9R7Function: Regulatory subunit of protein phospatase 6 (PP6). May function as a scaffolding PP6 subunit. May have an important role in maintaining immune self-tolerance2 Gene Ontology (GO) molecular function terms (links to tree view): About this table | Pathways & Interactions for SAPS3
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
4 Interacting proteins for SAPS3 (Q5H9R71 ENSP000002656363) via UniProtKB, MINT, and/or STRINGAbout this table
1 Gene Ontology (GO) biological process term (links to tree view): | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0043666 | regulation of phosphoprotein phosphatase activity |
IDA | 16716191 | About this table
|
Drugs & Compounds for SAPS3(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Browse Tocris compounds for SAPS3
|
Transcripts for SAPS3(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_018312
Sigma-Aldrich siRNA and siRNA Panels for SAPS3  Sigma-Aldrich shRNA for SAPS3  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_018312 REFSEQ mRNAs for SAPS3 gene: NM_018312.3
Applied Biosystems TaqMan ® Gene Expression Assays: NM_018312               OriGene GFP tagged cDNA clone in CMV expression vector: NM_018312                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_018312                                  untagged cDNA clone in CMV expression vector: NM_018312  Additional cDNA sequence: AF264779.1 AF264780.1 AK001920.1 AK023950.1 AK057250.1 AK125055.1 AK298180.1 AK300359.1 AK302611.1 AK303315.1 AK315136.1 AL389982.1 AL834471.1 BC007738.2 BC020953.1 BC070121.1 BC105933.1 BC105934.1 BC107599.1 CR593310.1 CR604147.1 CR749815.1 CR933658.1 CR936718.1 DQ111954.2 24/33 DOTS entries (see all 33
): DT.100819128 DT.100819125 DT.80101945 DT.100690486 DT.91839330 DT.95228686 DT.91836528 DT.95190004 DT.92440078 DT.120685456 DT.40268979 DT.40310526 DT.100739749 DT.75148277 DT.91962698 DT.95202556 DT.95228724 DT.97786499 DT.40270828 DT.40288313 DT.97859323 DT.100036037 DT.100663510 DT.120685431 24/308 AceView cDNA sequences (see all 308
):AW449948 AK125055 BU184323 AI264636 AI097191 AW440506 AU136636 AA730124 AI375602 BQ424158 CB989885 AU121246 AI423743 BM671204 BM977372 AF264779 AL597561 AL523771 BM554171 BM994672 AI381972 BM710048 BF436246 AW276258
highest scoring ESTs for SAPS3:AI200641 N63911 AA279064 AA336568 AA397741 AA420972 AA604175 AA632819 AA694446 AA770328 Unigene Cluster for SAPS3: SAPS domain family, member 3 Hs.503022 [show with all ESTs]Unigene Representative Sequence: CR936718
GeneLoc Exon Structure
5/17 Alternative Splicing Database (ASD) splice patterns (SP) for SAPS3 (see all 17
)
| ExUns: | 1a | · | 1b | · | 1c | ^ | 2a | · | 2b | ^ | 3a | · | 3b | ^ | 4a | · | 4b | ^ | 5 | ^ | 6a | · | 6b | · | 6c | ^ | 7a | · | 7b | · | 7c | · | 7d | ^ | 8 | ^ | 9 | ^ | 10 | ^ | 11a | · | 11b | ^ | 12a | · | 12b | ^ | 13 | ^ | 14 | ^ | |
| SP1: | |   | |   | |   | |   | |   | |   | |   | |   | |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | - |   | |   | |   | |   | |   | |   | |
| SP2: | |   | |   | |   | |   | - |   | - |   | - |   | |   | |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | - |   | |   | |   | |   | - |   | |   | |
| SP3: | |   | |   | |   | |   | - |   | - |   | - |   | |   | |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | - |   | |   | |   | |   | - |   | |   | |
| SP4: | |   | |   | |   | |   | |   | |   | |   | |   | |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | - |   | |   | |   | |   | |   | |   | |
| SP5: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   |
| ExUns: | 15 | ^ | 16 | ^ | 17a | · | 17b | ^ | 18 | ^ | 19a | · | 19b | · | 19c | ^ | 20 | ^ | 21 | ^ | 22 | ^ | 23 | ^ | 24 | ^ | 25 | ^ | 26a | · | 26b | · | 26c | ^ | 27a | · | 27b | · | 27c | · | 27d | ^ | 28 | |
| SP1: | |   | |   | |   | |   | |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | - |   | |   | |   | - |   | |   | |   | |   | |   | |
| SP2: | |   | |   | |   | |   | - |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | - |   | |   | |   | - |   | |   | |   | |   | |   | |
| SP3: | |   | |   | |   | |   | - |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | - |   | |   | |   | - |   | - |   | - |   | - |   | |   | |
| SP4: | |   | |   | |   | |   | - |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | - |   | |   | |   | - |   | |   | |   | |   | |   | |
| SP5: | |   | |   | |   | |   | - |   | - |   | - |   | |   | |   | |   | |   | |   | |   | |   | - |   | |   | |   | - |   | |   | |   | |   | |   |
About this scheme
ECgene alternative splicing isoforms for SAPS3
5 Ensembl transcripts including schematic representations: ENST00000393799
ENST00000265637
ENST00000393801
ENST00000265636
ENST00000393800
|
Expression for SAPS3
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| SAPS3 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for SAPS3
1 / 2 / 3 10 probe-sets matching SAPS3 gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: GCCAGGGTTT
SOURCE GeneReport for Unigene cluster: Hs.503022 UniProtKB/Swiss-Prot: SAPS3_HUMAN, Q5H9R7Tissue specificity: Expressed in skeletal muscle, placenta, heart, pancreas, testis, brain, lung, liver, kidney, spleen, thymus, prostate, small intestine, colon and leukocytes |
Orthologs for SAPS3
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for SAPS3 gene from 5/9 species (see all 9
)
About this table Species with no ortholog for SAPS3
ENSEMBL Gene Tree for SAPS3 | Paralogs for SAPS3(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for SAPS3 gene
- SAPS12 SAPS22
|
SNPs/Variants for SAPS3(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for SAPS3 (up to first 250kb)
|
Disorders & Mutations for SAPS3
(in which this Gene is Involved, According to
OMIM, UniProtKB,
PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 610879
|
Medical News for SAPS3(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for SAPS3 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/18 PubMed articles for SAPS3 gene (see all 18
):- The sequence and gene characterization of a 400-kb candidate region for IDDM4 on chromosome 11q13. (PubMed id 11401438)2, 3, 4 Twells R.C....Hess J.F. (2001)
- Protein phosphatase 6 regulatory subunits composed of ankyrin repeat domains. (PubMed id 18186651)3, 4 Stefansson B.... Brautigan D.L. (2008)
- A probability-based approach for high-throughput protein phosphorylation analysis and site localization. (PubMed id 16964243)3, 4 Beausoleil S.A.... Gygi S.P. (2006)
- Protein phosphatase 6 subunit with conserved Sit4-associated protein domain targets IkappaBepsilon. (PubMed id 16769727)3, 4 Stefansson B. and Brautigan D.L. (2006)
- Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. (PubMed id 17081983)3, 4 Olsen J.V....Mann M. (2006)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)3, 4 Gerhard D.S....Malek J. (2004)
- Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)3, 4 Ota T....Sugano S. (2004)
- Large-scale characterization of HeLa cell nuclear phosphoproteins. (PubMed id 15302935)3, 4 Beausoleil S.A....Gygi S.P. (2004)
- Prediction of the coding sequences of unidentified human genes. XVIII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro. (PubMed id 10997877)3, 4 Nagase T....Ohara O. (2000)
- Kinase-selective enrichment enables quantitative phosphoproteomics of the kinome across the cell cycle. (PubMed id 18691976)4 Daub H.... Mann M. (2008)
|
Search for SAPS3
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing SAPS3
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing SAPS3
(According to HUGE)
About This Section
| |
Specialized Databases showing SAPS3(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for SAPS3(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for SAPS3:

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Incremental update: 13 Oct 2009
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