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Aliases & Descriptions for SAPS2
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| KIAA0685 1, 2, 3, 5 | | PP6R2 2, 3, 5 | | SAP190 1, 2 | | dJ579N16.1 1, 2 |
| | | Descriptions |
|---|
| SAPS domain family member 2 3 | | SAPS domain family, member 2 2 |
|
| | Search outside databases for aliases for SAPS2 gene |
Summaries for SAPS2(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for SAPS2: Protein phosphatase regulatory subunits, such as SAPS2, modulate the activity of protein phosphatase catalytic subunits by restricting substrate specificity, recruiting substrates, and determining the intracellular localization of the holoenzyme. SAPS2 is a regulatory subunit for the protein phosphatase-6 catalytic subunit (PPP6C; MIM 300141) (Stefansson and Brautigan, 2006 [PubMed 16769727]).[supplied by OMIM] UniProtKB/Swiss-Prot: SAPS2_HUMAN, O75170Function: Regulatory subunit of protein phospatase 6 (PP6). May function as a scaffolding PP6 subunit. Involved in the PP6-mediated dephosphorylation of NFKBIE opposing its degradation in response to TNF-alpha |
Genomic Location for SAPS2
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the SAPS2 gene 
Entrez Gene cytogenetic band: 22q13.33 Ensembl cytogenetic band: 22q13.33 HGNC cytogenetic band: 22q13.33SAPS2 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 22 GeneLoc Exon Structure GeneLoc location for GC22P049072:
(about GC identifiers)
Start:
|
49,128,599 bp from pter |
End:
|
49,230,380 bp from pter |
Size:
|
101,782 bases |
Orientation:
|
plus strand |
RefSeq DNA sequence:- NC_000022.9 NT_011526.6
| Proteins for SAPS2
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: SAPS2_HUMAN, O75170 (See
protein sequence)Recommended Name: Serine/threonine-protein phosphatase 6 regulatory subunit 2 Size: 966 amino acids; 104942 Da
Subunit: Protein phospatase 6 (PP6) holoenzyme is proposed to be a heterotrimeric complex formed by the catalytic subunit, a SAPS domain-containing subunit (PP6R) and an ankyrin repeat-domain containing regulatory subunit (ARS). Interacts with PPP6C and NFKBIE. Interacts with ANKRD28
Subcellular location: Cytoplasm
Secondary accessions: A6PVG3 Q7Z5G5 Q9UGB9Alternative splicing: 2 isoforms: O75170-1 O75170-2 Post-translational modifications:
View phosphorylation sites using PhosphoSite2
REFSEQ proteins: NP_055493.2
ENSEMBL proteins: ENSP00000379095 ENSP00000352051 ENSP00000379090 ENSP00000379093 ENSP00000216061 ENSP00000384532
Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
1 Gene Ontology (GO) cellular component term (links to tree view): | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0005737 | cytoplasm |
IEA | -- | About this table
Antibodies for SAPS2: Assays for SAPS2: | Protein
Domains/ Families for SAPS2(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry O75170
ProtoNet protein and cluster: O75170 1 Blocks protein family: IPB007587 SIT4 phosphatase-associated protein
UniProtKB/Swiss-Prot: SAPS2_HUMAN, O75170Similarity: Belongs to the SAPS family | Gene Function for SAPS2
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|                OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 3): BC006568
Applied Biosystems Silencer® siRNAs for SAPS2
Sigma-Aldrich siRNA for SAPS2  Sigma-Aldrich shRNA for SAPS2  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_014678                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_014678                                  untagged cDNA clones in CMV expression vector (see all 4): BC006568 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_014678
UniProtKB/Swiss-Prot: SAPS2_HUMAN, O75170Function: Regulatory subunit of protein phospatase 6 (PP6). May function as a scaffolding PP6 subunit. Involved in the PP6-mediated dephosphorylation of NFKBIE opposing its degradation in response to TNF-alpha1 Gene Ontology (GO) molecular function term (links to tree view): About this table | Pathways & Interactions for SAPS2
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
3 Interacting proteins for SAPS2 (ENSP000002160613 O751701, 2) via UniProtKB, MINT, and/or STRING| Interactant | Interaction Details |
|---|
| GeneCard | External ID(s) |
|---|
| PPP6C | O007431 | STRING (score=.972) EBI-359739, EBI-359751 | | NFKBIE | O002211, 2 | STRING (score=.973) EBI-359739, EBI-355098 MINT-47945 EBI-359739, EBI-355098 MINT-47945 | | ANKRD28 | O150841 | EBI-359739, EBI-359567 | | NFKBIE | O002211, 2 | STRING (score=.973) EBI-359739, EBI-355098 MINT-47945 EBI-359739, EBI-355098 MINT-47945 | | NFKBIE | O002211, 2 | STRING (score=.973) EBI-359739, EBI-355098 MINT-47945 EBI-359739, EBI-355098 MINT-47945 | About this table
|
Drugs & Compounds for SAPS2(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Browse Tocris compounds for SAPS2
|
Transcripts for SAPS2(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|                OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 3): BC006568
Sigma-Aldrich siRNA for SAPS2  Sigma-Aldrich shRNA for SAPS2  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_014678 REFSEQ mRNAs for SAPS2 gene: NM_014678.3
Applied Biosystems TaqMan ® Gene Expression Assays: NM_014678               OriGene GFP tagged cDNA clone in CMV expression vector: NM_014678                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_014678                                  untagged cDNA clones in CMV expression vector (see all 4): BC006568  Additional cDNA sequence: AB014585.1 AK002063.1 AK022669.1 AK302472.1 BC000976.4 BC006568.2 BC032664.1 BC041698.1 BC052995.2 CR611290.1 24/39 DOTS entries (see all 39
): DT.448541 DT.100796870 DT.91754729 DT.100796851 DT.101984931 DT.100811416 DT.40296258 DT.95129220 DT.100796869 DT.95129217 DT.100796866 DT.95129242 DT.100796868 DT.120634500 DT.100699279 DT.95362164 DT.100796867 DT.91721997 DT.91746235 DT.100796860 DT.100811415 DT.102838633 DT.120634528 DT.120634577 24/324 AceView cDNA sequences (see all 324
):H55503 BM708928 CD742832 BC000976 F29393 BM806913 BQ643762 AA897448 BM789768 CA432857 AI459136 AW204394 BX508819 BQ648390 BQ937868 CK903718 AI739063 BU186078 AA991740 BM772885 AL046689 AW134896 NM_014678 BX487177
highest scoring ESTs for SAPS2:AB014585 AA120796 AA341237 AA405797 AA550804 AA577405 AA595366 AA642372 AA676532 AA765065 Unigene Cluster for SAPS2: SAPS domain family, member 2 Hs.449098 [show with all ESTs]Unigene Representative Sequence: NM_014678
GeneLoc Exon Structure
5/15 Alternative Splicing Database (ASD) splice patterns (SP) for SAPS2 (see all 15
)
| ExUns: | 1a | · | 1b | · | 1c | · | 1d | ^ | 2a | · | 2b | · | 2c | ^ | 3 | ^ | 4a | · | 4b | ^ | 5 | ^ | 6a | · | 6b | ^ | 7a | · | 7b | · | 7c | ^ | 8 | ^ | 9 | ^ | 10a | · | 10b | ^ | 11 | ^ | 12a | · | 12b | ^ | 13 | ^ | 14 | ^ | 15a | · | |
| SP1: | |   | |   | |   | |   | - |   | - |   | - |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP2: | |   | |   | |   | |   | - |   | - |   | - |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP3: | |   | |   | |   | |   | - |   | - |   | - |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP4: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP5: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   |
| ExUns: | 15b | ^ | 16 | ^ | 17 | ^ | 18 | ^ | 19 | ^ | 20 | ^ | 21 | ^ | 22a | · | 22b | ^ | 23 | ^ | 24 | ^ | 25a | · | 25b | ^ | 26 | |
| SP1: | |   | |   | - |   | |   | |   | |   | |   | |   | - |   | |   | |   | - |   | |   | |   | |
| SP2: | |   | |   | - |   | |   | |   | |   | |   | |   | - |   | |   | |   | - |   | |   | |   | |
| SP3: | |   | |   | - |   | |   | |   | |   | |   | |   | - |   | |   | |   | - |   | |   | |   | |
| SP4: | |   | |   | |   | |   | |   | |   | |   | |   | - |   | |   | |   | - |   | |   | |   | |
| SP5: | |   | |   | - |   | |   | |   | |   | |   | |   | - |   | |   | |   | - |   | |   | |   |
About this scheme
ECgene alternative splicing isoforms for SAPS2
6 Ensembl transcripts including schematic representations: ENST00000395746
ENST00000359139
ENST00000395741
ENST00000395744
ENST00000216061
ENST00000401672
|
Expression for SAPS2
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| SAPS2 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for SAPS2
1 / 2 / 3 7 probe-sets matching SAPS2 gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: TCGTCCTAGA
SOURCE GeneReport for Unigene cluster: Hs.449098
Expression variation in blood from EXPOLDB for SAPS2 UniProtKB/Swiss-Prot: SAPS2_HUMAN, O75170Tissue specificity: Ubiquitously expressed with strongest expression in the testis followed by liver, heart, kidney, brain and placenta |
Orthologs for SAPS2
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for SAPS2 gene from 5/9 species (see all 9
)
About this table Species with no ortholog for SAPS2
ENSEMBL Gene Tree for SAPS2 | Paralogs for SAPS2(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for SAPS2 gene
- SAPS12 SAPS32
|
SNPs/Variants for SAPS2(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for SAPS2 (up to first 250kb)
|
Disorders & Mutations for SAPS2
(in which this Gene is Involved, According to
OMIM, UniProtKB,
PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 610877
|
Medical News for SAPS2(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for SAPS2 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/11 PubMed articles for SAPS2 gene (see all 11
): |
Search for SAPS2
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing SAPS2
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing SAPS2
(According to HUGE)
About This Section
| |
Specialized Databases showing SAPS2(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for SAPS2(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for SAPS2:

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GeneCards Homepage - Last full update: 1 Jul 2009
Incremental update: 13 Oct 2009
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