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Aliases for SAMD11P1 Gene

Aliases for SAMD11P1 Gene

  • Sterile Alpha Motif Domain Containing 11 Pseudogene 1 2 3 5

External Ids for SAMD11P1 Gene

Previous GeneCards Identifiers for SAMD11P1 Gene

  • GC17M002517

Summaries for SAMD11P1 Gene

GeneCards Summary for SAMD11P1 Gene

SAMD11P1 (Sterile Alpha Motif Domain Containing 11 Pseudogene 1) is a Pseudogene.

Additional gene information for SAMD11P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SAMD11P1 Gene

Genomics for SAMD11P1 Gene

Regulatory Elements for SAMD11P1 Gene

Enhancers for SAMD11P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17H002390 1.9 FANTOM5 ENCODE dbSUPER 14.6 +215.0 214958 18 MLX FEZF1 DMAP1 YY1 ZNF143 SP3 NFYC SSRP1 ZNF610 ZNF585B METTL16 PRPF8 SMYD4 HNRNPA1P16 SMG6 MNT TSR1 ENSG00000263345 SGSM2 RPA1
GH17H002847 1.7 FANTOM5 Ensembl ENCODE dbSUPER 14.6 -234.9 -234853 1 ELF3 INSM2 KLF17 SIN3A ZNF2 RAD21 ZEB1 GLIS2 ZNF366 ZNF143 OR1D5 SAMD11P1 OR1D2 EIF4A1P9 OR1E3 OR1D3P OR3A4P OR1E2 ENSG00000262869 PAFAH1B1
GH17H001624 1.7 FANTOM5 ENCODE dbSUPER 14.6 +986.5 986493 6 HDGF PKNOX1 FOXA2 ARID4B SIN3A FEZF1 ZNF2 ZBTB7B ZNF143 ZNF207 PITPNA SLC43A2 ENSG00000263050 SMG6 ENSG00000262869 SAMD11P1 EIF4A1P9 HNRNPA1P16 ENSG00000263345 SCARF1
GH17H003001 1.5 Ensembl ENCODE dbSUPER 14.6 -389.9 -389880 4 FOXA2 SIN3A BRCA1 ZNF2 YY1 GLIS2 ATF7 RUNX3 REST ZNF610 OR1D5 OR1D2 OR1E3 OR1D3P OR3A4P SAMD11P1 EIF4A1P9 OR1E2 ENSG00000262869 RAP1GAP2
GH17H002924 1.4 Ensembl ENCODE dbSUPER 14.6 -311.5 -311549 2 INSM2 ZNF76 KLF17 GLI4 ZNF366 ATF7 EGR2 YY2 ZNF114 ZNF662 METTL16 SMG6 HNRNPA1P16 LOC105371492 OR1D5 OR1D2 OR1E3 SAMD11P1 EIF4A1P9 OR1D3P
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SAMD11P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for SAMD11P1 Gene

Chromosome:
17
Start:
2,613,282 bp from pter
End:
2,613,969 bp from pter
Size:
688 bases
Orientation:
Minus strand

Genomic View for SAMD11P1 Gene

Genes around SAMD11P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SAMD11P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SAMD11P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SAMD11P1 Gene

Proteins for SAMD11P1 Gene

Post-translational modifications for SAMD11P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SAMD11P1 Gene

Domains & Families for SAMD11P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SAMD11P1 Gene

Function for SAMD11P1 Gene

Phenotypes From GWAS Catalog for SAMD11P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SAMD11P1 Gene

Localization for SAMD11P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SAMD11P1 Gene

Pathways & Interactions for SAMD11P1 Gene

SuperPathways for SAMD11P1 Gene

No Data Available

Interacting Proteins for SAMD11P1 Gene

Gene Ontology (GO) - Biological Process for SAMD11P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SAMD11P1 Gene

Drugs & Compounds for SAMD11P1 Gene

No Compound Related Data Available

Transcripts for SAMD11P1 Gene

mRNA/cDNA for SAMD11P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SAMD11P1 Gene

No ASD Table

Relevant External Links for SAMD11P1 Gene

GeneLoc Exon Structure for
SAMD11P1
ECgene alternative splicing isoforms for
SAMD11P1

Expression for SAMD11P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SAMD11P1 Gene

mRNA differential expression in normal tissues according to GTEx for SAMD11P1 Gene

This gene is overexpressed in Testis (x4.5).

NURSA nuclear receptor signaling pathways regulating expression of SAMD11P1 Gene:

SAMD11P1
genes like me logo Genes that share expression patterns with SAMD11P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SAMD11P1 Gene

Orthologs for SAMD11P1 Gene

Evolution for SAMD11P1 Gene

ENSEMBL:
Gene Tree for SAMD11P1 (if available)
TreeFam:
Gene Tree for SAMD11P1 (if available)

No data available for Orthologs for SAMD11P1 Gene

Paralogs for SAMD11P1 Gene

No data available for Paralogs for SAMD11P1 Gene

Variants for SAMD11P1 Gene

Relevant External Links for SAMD11P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SAMD11P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SAMD11P1 Gene

Disorders for SAMD11P1 Gene

No disorders were found for SAMD11P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SAMD11P1 Gene

Publications for SAMD11P1 Gene

No publications were found for SAMD11P1 Gene.

Products for SAMD11P1 Gene

Sources for SAMD11P1 Gene

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