Aliases for SAMD11P1 Gene
External Ids for SAMD11P1 Gene
- HGNC: 44473
- Entrez Gene: 100421331
- Ensembl: ENSG00000262480
Previous GeneCards Identifiers for SAMD11P1 Gene
- GC17M002517
Summaries for SAMD11P1 Gene
GeneCards Summary for SAMD11P1 Gene
SAMD11P1 (Sterile Alpha Motif Domain Containing 11 Pseudogene 1) is a Pseudogene.
Additional gene information for SAMD11P1 Gene
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SAMD11P1 Gene
Genomics for SAMD11P1 Gene
GeneHancer (GH) Regulatory Elements for SAMD11P1 Gene
Promoters and enhancers for SAMD11P1 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH17I002623 | Enhancer | 1 | Ensembl ENCODE | 0.4 | -10.4 | -10440 | 1.6 | HDAC1 PKNOX1 ZBTB40 TCF12 ZNF766 SCRT2 ETV6 ATF7 IKZF2 ZBTB2 | METTL16 LOC105371490 ENSG00000279432 SAMD11P1 PAFAH1B1 | |
| GH17I002633 | Enhancer | 0.9 | ENCODE | 0.3 | -20.7 | -20741 | 2 | ZNF133 INSM2 FEZF1 RAD21 ZNF335 ZNF121 POLR3A ZNF366 ZSCAN5C SCRT2 | DPH1 METTL16 CLUH ENSG00000263345 LOC105371490 ENSG00000279432 SAMD11P1 PAFAH1B1 | |
| GH17I002630 | Enhancer | 0.6 | Ensembl ENCODE | 0.4 | -17.4 | -17365 | 1.1 | GLIS1 ZIC2 | METTL16 CLUH ENSG00000279432 SAMD11P1 PAFAH1B1 | |
| GH17I002635 | Enhancer | 0.2 | ENCODE | 0.3 | -21.9 | -21893 | 0.2 | ENSG00000279432 SAMD11P1 PAFAH1B1 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data dump
GeneHancers around SAMD11P1 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Locations for SAMD11P1 Gene
Genomic Locations for SAMD11P1 Gene
- chr17:2,613,282-2,613,969
- (GRCh38/hg38)
- Size:
- 688 bases
- Orientation:
- Minus strand
- chr17:2,516,576-2,517,263
- (GRCh37/hg19)
Genomic View for SAMD11P1 Gene
Genes around SAMD11P1 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 17p13.3 by Ensembl
- 17p13.3 by Entrez Gene
- 17p13.3 by HGNC
SAMD11P1 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for SAMD11P1 Gene
Proteins for SAMD11P1 Gene
Post-translational modifications for SAMD11P1 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for SAMD11P1
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for SAMD11P1
- Origene Custom Protein Services for SAMD11P1
- Search GeneTex for Proteins for SAMD11P1
No data available for DME Specific Peptides for SAMD11P1 Gene
Domains & Families for SAMD11P1 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SAMD11P1 Gene
Function for SAMD11P1 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for SAMD11P1
-
- Search ViGene Biosciences for SAMD11P1
CRISPR Products
- Browse CRISPR knockouts for SAMD11P1
miRNA Products
- Search ViGene Biosciences for SAMD11P1
Inhibitory RNA Products
- Search ViGene Biosciences for SAMD11P1
Clone Products
- GenScript: Custom all cDNA clones Services for SAMD11P1
- VectorBuilder custom plasmid, inducible vectors for SAMD11P1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for SAMD11P1
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SAMD11P1 Gene
Localization for SAMD11P1 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SAMD11P1 Gene
Transcripts for SAMD11P1 Gene
mRNA/cDNA for SAMD11P1 Gene
- (1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
CRISPR Products
- Browse CRISPR knockouts for SAMD11P1
miRNA Products
- Search ViGene Biosciences for SAMD11P1
Inhibitory RNA Products
- Search ViGene Biosciences for SAMD11P1
Clone Products
- GenScript: Custom all cDNA clones Services for SAMD11P1
- VectorBuilder custom plasmid, inducible vectors for SAMD11P1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for SAMD11P1
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Expression for SAMD11P1 Gene
mRNA differential expression in normal tissues according to GTEx for SAMD11P1 Gene
This gene is overexpressed in Testis (x4.5).
NURSA nuclear receptor signaling pathways regulating expression of SAMD11P1 Gene:
SAMD11P1
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SAMD11P1 Gene
Orthologs for SAMD11P1 Gene
No data available for Orthologs for SAMD11P1 Gene
Paralogs for SAMD11P1 Gene
No data available for Paralogs for SAMD11P1 Gene
Variants for SAMD11P1 Gene
Additional Variant Information for SAMD11P1 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- SAMD11P1
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SAMD11P1 Gene
Disorders for SAMD11P1 Gene
No disorders were found for SAMD11P1 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SAMD11P1 Gene
Publications for SAMD11P1 Gene
No publications were found for SAMD11P1 Gene.
Products for SAMD11P1 Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Primary Antibodies
- Browse Proteins and Enzymes
- Browse ELISAs
- Browse Activity Assays
- Browse cDNA Clones
- Browse Cell Culture Products
- Browse Cell Selection and Detection Kits
- Browse DNA Damage and Repair Kits
- Browse ELISpot/FluoroSpot Kits and Development Modules
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- Browse Immunoprecipitation Assays
- Browse Luminex Assays
- Browse Peptides
- Browse Proteome Profiler Antibody Arrays
- Browse Small Molecules
- Browse OriGene Antibodies
- Custom Antibody Services
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- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for SAMD11P1
- Origene Custom Protein Services for SAMD11P1
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- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for SAMD11P1
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For SAMD11P1
- GenScript: Custom all cDNA clones Services for SAMD11P1
- GenScript Custom Purified and Recombinant Proteins Services for SAMD11P1
- GenScript Custom Assay Services for SAMD11P1
- GenScript Custom overexpressing Cell Line Services for SAMD11P1
- Browse GenScript CRISPR for SAMD11P1
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
- Gene Synthesis: Any Gene in Any Vector
- Vector-based siRNA and miRNA, Ready for Transfection
- Gene Mutant Library, Variants up to 10^11
- Plasmid Preparation
- GenScript Custom Peptide Services for SAMD11P1
- Browse Sino Biological cDNA Clones
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- Sino Biological Transfection Reagent
- Sino Biological Anti-His Tag Antibody
- Novus Biologicals
- Novus Biologicals Tissue Microarrays
- Browse Antibodies at Cloud-Clone Corp.
- Browse Proteins at Cloud-Clone Corp.
- Browse Assay Kits at Cloud-Clone Corp.
- Browse Knockouts at Cloud-Clone Corp.
- Browse Knockins at Cloud-Clone Corp.
- Cloud-Clone Corp. disease models service
- Browse cDNA clones at Cloud-Clone Corp.
- Browse primers at Cloud-Clone Corp.
- Cloud-Clone Corp. primary cells service
- Cyagen custom Knockout/knockin (KOKI) mouse models for SAMD11P1
- VectorBuilder custom plasmid, inducible vectors for SAMD11P1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for SAMD11P1
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Search GeneTex for Antibodies for SAMD11P1
- Search GeneTex for Proteins for SAMD11P1
Sources for SAMD11P1 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
- (87) BioSystems
- (88) MaxQB
- (89) IUPHAR
- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
- (93) HOMER
- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
- (106) GTEx
- (107) ProteomicsDB
- (108) SCBT
- (109) DGIdb
- (110) ClinicalTrials
- (111) FDA Approved Drugs
- (112) RVIS
- (113) SIGNOR
- (114) diseasecard
- (115) NIH Rare Diseases
- (116) Orphanet
- (117) UMLS
- (118) GTR
- (119) Disease Ontology
- (120) Genetics Home Reference
- (121) MeSH
- (122) MedlinePlus
- (123) CDC
- (124) NINDS
- (125) NCBI Bookshelf
- (126) ClinVar
- (127) Gene Damage Index
- (128) ViGene Biosciences
- (129) HPO
- (130) UDN
- (131) VISTA
- (132) FANTOM5
- (133) ENCODE
- (134) ProSci
- (135) Horizon
- (136) NURSA
- (137) IID
- (138) Cyagen
- (139) VectorBuilder
- (140) SNPedia
- (141) BRCA Exchange
- (142) St John's Lab
- (143) CIViC
- (144) ProteoGenix
- (145) dbSUPER
- (146) TISSUES
- (147) Gene ORGANizer
- (148) abm
- (149) CrownBio
- (150) Human Protein Atlas
- (151) GWAS Catalog
- (152) Monarch Initiative
- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
- (156) UCNEbase
- (157) EPDnew