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Aliases for SAMD11P1 Gene

Aliases for SAMD11P1 Gene

  • Sterile Alpha Motif Domain Containing 11 Pseudogene 1 2 3 5

External Ids for SAMD11P1 Gene

Previous GeneCards Identifiers for SAMD11P1 Gene

  • GC17M002517

Summaries for SAMD11P1 Gene

GeneCards Summary for SAMD11P1 Gene

SAMD11P1 (Sterile Alpha Motif Domain Containing 11 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SAMD11P1 Gene

Genomics for SAMD11P1 Gene

Regulatory Elements for SAMD11P1 Gene

Enhancers for SAMD11P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17F002489 1 ENCODE 16.3 +124.3 124291 0.8 HDGF CREB3L1 ARID4B SIN3A ZNF2 YY1 ZNF143 ZNF207 KLF13 SP3 EIF4A1P9 SAMD11P1 ENSG00000262869 OR1D5 OR1D2 OR1E3 OR1D3P OR1E2 OR3A4P METTL16
GH17F002485 0.8 Ensembl ENCODE 16.3 +127.4 127369 2.0 SOX13 CTCF KLF1 CEBPG CHD7 ZNF121 GATA3 ZFHX2 THAP11 EGR2 EIF4A1P9 SAMD11P1 ENSG00000262869 OR1D5 OR1D2 OR1E3 OR1D3P OR1E2 OR3A4P METTL16
GH17F002847 1.1 FANTOM5 Ensembl ENCODE 16.2 -234.5 -234525 2.6 ELF3 ZFP64 INSM2 KLF17 SIN3A ZNF48 ZNF2 RAD21 ZEB1 GLIS2 HNRNPA1P16 METTL16 ENSG00000263345 LOC105371492 OR1D5 SAMD11P1 OR1D2 OR1E3 EIF4A1P9 OR1D3P
GH17F002390 0.8 FANTOM5 ENCODE 16.2 +215.0 214958 18.6 CREB3L1 MLX FEZF1 DMAP1 YY1 ZNF143 ZNF263 SP3 NFYC TBX21 METTL16 SMYD4 ENSG00000263345 SMG6 MNT EIF4A1P9 SAMD11P1 ENSG00000262869 OR1E3 OR1D2
GH17F002924 1.2 Ensembl ENCODE 16.2 -311.5 -311549 2.6 INSM2 ZNF76 SIN3A KLF17 GLI4 ZNF2 RAD21 ZNF366 ZNF143 ZNF391 OR1D5 OR1D2 OR1E3 SAMD11P1 EIF4A1P9 OR1D3P OR3A4P OR1E2 ENSG00000262869 LOC105371492
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around SAMD11P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for SAMD11P1 Gene

Chromosome:
17
Start:
2,613,282 bp from pter
End:
2,613,969 bp from pter
Size:
688 bases
Orientation:
Minus strand

Genomic View for SAMD11P1 Gene

Genes around SAMD11P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SAMD11P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SAMD11P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SAMD11P1 Gene

Proteins for SAMD11P1 Gene

Post-translational modifications for SAMD11P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SAMD11P1 Gene

Domains & Families for SAMD11P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SAMD11P1 Gene

Function for SAMD11P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SAMD11P1 Gene

Localization for SAMD11P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SAMD11P1 Gene

Pathways & Interactions for SAMD11P1 Gene

SuperPathways for SAMD11P1 Gene

No Data Available

Interacting Proteins for SAMD11P1 Gene

Gene Ontology (GO) - Biological Process for SAMD11P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SAMD11P1 Gene

Transcripts for SAMD11P1 Gene

mRNA/cDNA for SAMD11P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SAMD11P1 Gene

No ASD Table

Relevant External Links for SAMD11P1 Gene

GeneLoc Exon Structure for
SAMD11P1
ECgene alternative splicing isoforms for
SAMD11P1

Expression for SAMD11P1 Gene

mRNA expression in normal human tissues for SAMD11P1 Gene

mRNA differential expression in normal tissues according to GTEx for SAMD11P1 Gene

This gene is overexpressed in Testis (x4.5).

NURSA nuclear receptor signaling pathways regulating expression of SAMD11P1 Gene:

SAMD11P1
genes like me logo Genes that share expression patterns with SAMD11P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for SAMD11P1 Gene

Orthologs for SAMD11P1 Gene

Evolution for SAMD11P1 Gene

ENSEMBL:
Gene Tree for SAMD11P1 (if available)
TreeFam:
Gene Tree for SAMD11P1 (if available)

No data available for Orthologs for SAMD11P1 Gene

Paralogs for SAMD11P1 Gene

No data available for Paralogs for SAMD11P1 Gene

Variants for SAMD11P1 Gene

Relevant External Links for SAMD11P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SAMD11P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SAMD11P1 Gene

Disorders for SAMD11P1 Gene

No disorders were found for SAMD11P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SAMD11P1 Gene

Publications for SAMD11P1 Gene

No publications were found for SAMD11P1 Gene.

Products for SAMD11P1 Gene

Sources for SAMD11P1 Gene

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