Free for academic non-profit institutions. Other users need a Commercial license

Aliases for SALRNA3 Gene

Subcategory (RNA class) for SALRNA3 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for SALRNA3 Gene

  • Senescence Associated Long Non-Coding RNA 3 2 3 5
  • XLOC_025918 3
  • SAL-RNA3 3

External Ids for SALRNA3 Gene

Previous GeneCards Identifiers for SALRNA3 Gene

  • GC00U934351
  • GC15U901944

Summaries for SALRNA3 Gene

GeneCards Summary for SALRNA3 Gene

SALRNA3 (Senescence Associated Long Non-Coding RNA 3) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SALRNA3 Gene

Genomics for SALRNA3 Gene

Regulatory Elements for SALRNA3 Gene

Enhancers for SALRNA3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH15F070617 0.6 ENCODE 0.8 +2.2 2167 1.3 ATF1 MLX ARID4B FEZF1 ZNF48 ZNF207 SP5 MXD4 MIER2 PPARG SALRNA3 SALRNA2
GH15F070607 1.3 Ensembl ENCODE 0.4 -7.5 -7534 1.6 ENSG00000259227 SALRNA3
GH15F070609 0.5 ENCODE 0.4 -5.5 -5505 1.1 TAF1 ZEB1 ZNF335 JUND ZNF366 ZNF747 NFE2 FOS ZNF600 NFE2L2 ENSG00000259227 SALRNA3
GH15F070625 0.2 Ensembl 0.4 +10.0 9954 0.2 ZNF680 ZBTB11 SPI1 SALRNA2 SALRNA3
GH15F070604 0.8 Ensembl ENCODE 0.4 -10.1 -10109 2.1 CTCF ZNF692 GLIS1 ETV4 RAD21 MIR629 UACA ENSG00000259227 SALRNA3
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around SALRNA3 on UCSC Golden Path with GeneCards custom track

Genomic Location for SALRNA3 Gene

70,615,547 bp from pter
70,616,567 bp from pter
1,021 bases
Plus strand

Genomic View for SALRNA3 Gene

Genes around SALRNA3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SALRNA3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SALRNA3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SALRNA3 Gene

Proteins for SALRNA3 Gene

Post-translational modifications for SALRNA3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SALRNA3 Gene

Domains & Families for SALRNA3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SALRNA3 Gene

Function for SALRNA3 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SALRNA3 Gene

Localization for SALRNA3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SALRNA3 Gene

Pathways & Interactions for SALRNA3 Gene

SuperPathways for SALRNA3 Gene

No Data Available

Interacting Proteins for SALRNA3 Gene

Gene Ontology (GO) - Biological Process for SALRNA3 Gene


No data available for Pathways by source and SIGNOR curated interactions for SALRNA3 Gene

Transcripts for SALRNA3 Gene

mRNA/cDNA for SALRNA3 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SALRNA3 Gene

No ASD Table

Relevant External Links for SALRNA3 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SALRNA3 Gene

NURSA nuclear receptor signaling pathways regulating expression of SALRNA3 Gene:

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for SALRNA3 Gene

Orthologs for SALRNA3 Gene

Evolution for SALRNA3 Gene

Gene Tree for SALRNA3 (if available)
Gene Tree for SALRNA3 (if available)

No data available for Orthologs for SALRNA3 Gene

Paralogs for SALRNA3 Gene

No data available for Paralogs for SALRNA3 Gene

Variants for SALRNA3 Gene

Sequence variations from dbSNP and Humsavar for SALRNA3 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type
rs114061220 -- 70,613,625(+) GGCAC(A/G)GTGGC upstream-variant-2KB
rs114154586 -- 70,616,222(+) TAACC(A/C)CAGCC nc-transcript-variant
rs114870152 -- 70,614,238(+) CTTAA(A/G)AGTCT upstream-variant-2KB
rs115020565 -- 70,614,641(+) GATAG(A/G)TAGAT upstream-variant-2KB
rs115539620 -- 70,614,511(+) TATTA(A/G)TCATG upstream-variant-2KB

Relevant External Links for SALRNA3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SALRNA3 Gene

Disorders for SALRNA3 Gene

Relevant External Links for SALRNA3

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for SALRNA3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SALRNA3 Gene

Publications for SALRNA3 Gene

  1. Senescence-associated lncRNAs: senescence-associated long noncoding RNAs. (PMID: 23758631) Abdelmohsen K. … Gorospe M. (Aging Cell 2013) 2 3 64

Products for SALRNA3 Gene

Sources for SALRNA3 Gene

Loading form....