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Aliases for SALRNA2 Gene

Subcategory (RNA class) for SALRNA2 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for SALRNA2 Gene

  • Senescence Associated Long Non-Coding RNA 2 2 3 5
  • XLOC_025931 3
  • SAL-RNA2 3

External Ids for SALRNA2 Gene

Previous GeneCards Identifiers for SALRNA2 Gene

  • GC00U934230
  • GC15U901849

Summaries for SALRNA2 Gene

GeneCards Summary for SALRNA2 Gene

SALRNA2 (Senescence Associated Long Non-Coding RNA 2) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SALRNA2 Gene

Genomics for SALRNA2 Gene

Genomic Location for SALRNA2 Gene

Chromosome:
15
Start:
70,635,249 bp from pter
End:
70,637,314 bp from pter
Size:
2,066 bases
Orientation:
Plus strand

Genomic View for SALRNA2 Gene

Genes around SALRNA2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SALRNA2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SALRNA2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SALRNA2 Gene

No data available for Regulatory Elements for SALRNA2 Gene

Proteins for SALRNA2 Gene

Post-translational modifications for SALRNA2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SALRNA2 Gene

Domains & Families for SALRNA2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SALRNA2 Gene

Function for SALRNA2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SALRNA2 Gene

Localization for SALRNA2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SALRNA2 Gene

Pathways & Interactions for SALRNA2 Gene

SuperPathways for SALRNA2 Gene

No Data Available

Interacting Proteins for SALRNA2 Gene

Gene Ontology (GO) - Biological Process for SALRNA2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SALRNA2 Gene

Drugs & Compounds for SALRNA2 Gene

No Compound Related Data Available

Transcripts for SALRNA2 Gene

mRNA/cDNA for SALRNA2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SALRNA2 Gene

No ASD Table

Relevant External Links for SALRNA2 Gene

GeneLoc Exon Structure for
SALRNA2
ECgene alternative splicing isoforms for
SALRNA2

Expression for SALRNA2 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for SALRNA2 Gene

Orthologs for SALRNA2 Gene

Evolution for SALRNA2 Gene

ENSEMBL:
Gene Tree for SALRNA2 (if available)
TreeFam:
Gene Tree for SALRNA2 (if available)

No data available for Orthologs for SALRNA2 Gene

Paralogs for SALRNA2 Gene

No data available for Paralogs for SALRNA2 Gene

Variants for SALRNA2 Gene

Sequence variations from dbSNP and Humsavar for SALRNA2 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type
rs1863770 -- 70,636,120(+) GTGAC(A/G)TCTTC nc-transcript-variant
rs8027877 -- 70,636,323(+) CATTT(A/G)CTGCA nc-transcript-variant
rs11632788 -- 70,634,608(+) CAACA(A/C)AAATT upstream-variant-2KB
rs11632825 -- 70,634,769(+) AAAAA(A/C)AGAAT upstream-variant-2KB
rs16954632 -- 70,635,505(+) TACAA(C/T)AGGAC nc-transcript-variant

Relevant External Links for SALRNA2 Gene

HapMap Linkage Disequilibrium report
SALRNA2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SALRNA2 Gene

Disorders for SALRNA2 Gene

Relevant External Links for SALRNA2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SALRNA2

No disorders were found for SALRNA2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SALRNA2 Gene

Publications for SALRNA2 Gene

  1. Senescence-associated lncRNAs: senescence-associated long noncoding RNAs. (PMID: 23758631) Abdelmohsen K. … Gorospe M. (Aging Cell 2013) 2 3 67

Products for SALRNA2 Gene

Sources for SALRNA2 Gene

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