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Aliases for SACS-AS1 Gene

Subcategory (RNA class) for SACS-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for SACS-AS1 Gene

  • SACS Antisense RNA 1 2 3 5
  • SACS Antisense RNA 1 (Non-Protein Coding) 2

External Ids for SACS-AS1 Gene

Previous GeneCards Identifiers for SACS-AS1 Gene

  • GC13P023995

Summaries for SACS-AS1 Gene

GeneCards Summary for SACS-AS1 Gene

SACS-AS1 (SACS Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SACS-AS1 Gene

Genomics for SACS-AS1 Gene

Regulatory Elements for SACS-AS1 Gene

Enhancers for SACS-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
- Elite enhancer/Elite enhancer-gene association

Enhancers around SACS-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for SACS-AS1 Gene

Chromosome:
13
Start:
23,418,971 bp from pter
End:
23,428,869 bp from pter
Size:
9,899 bases
Orientation:
Plus strand

Genomic View for SACS-AS1 Gene

Genes around SACS-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SACS-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SACS-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SACS-AS1 Gene

Proteins for SACS-AS1 Gene

Post-translational modifications for SACS-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SACS-AS1 Gene

Domains & Families for SACS-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SACS-AS1 Gene

Function for SACS-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SACS-AS1 Gene

Localization for SACS-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SACS-AS1 Gene

Pathways & Interactions for SACS-AS1 Gene

SuperPathways for SACS-AS1 Gene

No Data Available

Interacting Proteins for SACS-AS1 Gene

Gene Ontology (GO) - Biological Process for SACS-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SACS-AS1 Gene

Drugs & Compounds for SACS-AS1 Gene

No Compound Related Data Available

Transcripts for SACS-AS1 Gene

mRNA/cDNA for SACS-AS1 Gene

(4) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SACS-AS1 Gene

SACS antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for SACS-AS1 Gene

No ASD Table

Relevant External Links for SACS-AS1 Gene

GeneLoc Exon Structure for
SACS-AS1
ECgene alternative splicing isoforms for
SACS-AS1

Expression for SACS-AS1 Gene

mRNA expression in normal human tissues for SACS-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for SACS-AS1 Gene

This gene is overexpressed in Testis (x9.2) and Artery - Aorta (x4.1).

SOURCE GeneReport for Unigene cluster for SACS-AS1 Gene:

Hs.253280
genes like me logo Genes that share expression patterns with SACS-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for SACS-AS1 Gene

Orthologs for SACS-AS1 Gene

Evolution for SACS-AS1 Gene

ENSEMBL:
Gene Tree for SACS-AS1 (if available)
TreeFam:
Gene Tree for SACS-AS1 (if available)

No data available for Orthologs for SACS-AS1 Gene

Paralogs for SACS-AS1 Gene

No data available for Paralogs for SACS-AS1 Gene

Variants for SACS-AS1 Gene

Structural Variations from Database of Genomic Variants (DGV) for SACS-AS1 Gene

Variant ID Type Subtype PubMed ID
dgv1615n100 CNV gain 25217958
dgv3084n54 CNV gain 21841781
esv2422502 CNV duplication 17116639
esv2751136 CNV loss 17911159
esv3580576 CNV loss 25503493
esv3631519 CNV gain 21293372
esv3892311 CNV gain 25118596
esv3892319 CNV gain 25118596
esv5325 OTHER complex 18987735
nsv1078303 OTHER inversion 25765185
nsv1140246 OTHER inversion 24896259
nsv1151909 OTHER inversion 26484159
nsv455837 CNV gain 19166990
nsv455840 CNV loss 19166990
nsv521022 CNV loss 19592680
nsv525965 CNV gain 19592680
nsv561292 CNV loss 21841781
nsv561334 CNV gain 21841781
nsv561335 CNV loss 21841781
nsv561336 CNV loss 21841781

Relevant External Links for SACS-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SACS-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Variation tolerance for SACS-AS1 Gene

Disorders for SACS-AS1 Gene

Relevant External Links for SACS-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SACS-AS1

No disorders were found for SACS-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SACS-AS1 Gene

Publications for SACS-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 65
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 65

Products for SACS-AS1 Gene

Sources for SACS-AS1 Gene

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