Set Analyses:
Advanced Search

Advanced Search

 
Search By
Section (entire)
for


 
or upload a file of gene symbols


Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

S1PR5 Gene

protein-coding   GIFtS: 59
GCID: GC19M010626

sphingosine-1-phosphate receptor 5

(Previous names: endothelial differentiation, sphingolipid G-protein-coupled...)
(Previous symbol: EDG8)
 Explore 7 diseases affiliated with
S1PR5 via our new
 Human Malady Compendium 
Biological research products
for S1PR5
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Sphingosine-1-Phosphate Receptor 51 2     S1P Receptor 52 3
EDG81 2 3 5     S1P Receptor Edg-82 3
Edg-81 2     SPPR-12
Endothelial Differentiation, Sphingolipid G-Protein-Coupled Receptor, 81 2     SPPR-22
Endothelial Differentiation G-Protein-Coupled Receptor 82 3     Sphingosine 1-Phosphate Receptor 52
Sphingosine 1-Phosphate Receptor Edg-82 3     Sphingosine 1-Phosphate Receptor EDG82
S1P52 3     

External Ids:    HGNC: 142991   Entrez Gene: 536372   Ensembl: ENSG000001807397   OMIM: 6051465   UniProtKB: Q9H2283   

Export aliases for S1PR5 gene to outside databases

Previous GC identifers: GC19M010485 GC19M010201


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for S1PR5:
The lysosphingolipid sphingosine 1-phosphate (S1P) regulates cell proliferation, apoptosis, motility, and neurite
retraction. Its actions may be both intracellular as a second messenger and extracellular as a receptor ligand. S1P
and the structurally related lysolipid mediator lysophosphatidic acid (LPA) signal cells through a set of G
protein-coupled receptors known as EDG receptors. Some EDG receptors (e.g., EDG1; MIM 601974) are S1P receptors;
others (e.g., EDG2; MIM 602282) are LPA receptors.(supplied by OMIM, Mar 2008)

UniProtKB/Swiss-Prot: S1PR5_HUMAN, Q9H228
Function: Receptor for the lysosphingolipid sphingosine 1-phosphate (S1P). S1P is a bioactive lysophospholipid that
elicits diverse physiological effect on most types of cells and tissues. Is coupled to both the G(i/0)alpha and G(12)
subclass of heteromeric G-proteins (By similarity). May play a regulatory role in the transformation of radial glial
cells into astrocytes and may affect proliferative activity of these cells

summary for S1PR5:
Sphingosine-1-phosphate (S1P) receptors are a group of G-protein-coupled receptors that are currently
divided into five subtypes; S1P1, S1P2, S1P3, S1P4 and S1P5. They are expressed in a wide variety of
tissues, with each subtype exhibiting a different cell specificity, although they are found at their highest
density on leukocytes. S1P receptors couple to different G proteins to mediate a range of biological
effects; Gi/o modulates cellular survival, proliferation and motility; G12/13 modulates cytoskeletal
remodeling and cell-shape changes and Gq modulates a range of cellular effector functions.

Gene Wiki entry for S1PR5


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000019.9  NC_018930.1  NT_011295.11  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the S1PR5 gene promoter:
         USF1   MIF-1   GATA-2   Arnt   Egr-4   Max   USF-1   Pax-4a   c-Myc   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidS1PR5 promoter sequence
   Search SABiosciences Chromatin IP Primers for S1PR5

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat S1PR5


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 19p13.2   Ensembl cytogenetic band:  19p13.2   HGNC cytogenetic band: 19p13.2

S1PR5 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
S1PR5 gene location

GeneLoc information about chromosome 19         GeneLoc Exon Structure

GeneLoc location for GC19M010626:  view genomic region     (about GC identifiers)

Start:
10,623,418 bp from pter      End:
10,628,668 bp from pter
Size:
5,251 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: S1PR5_HUMAN, Q9H228 (See protein sequence)
Recommended Name: Sphingosine 1-phosphate receptor 5  
Size: 398 amino acids; 41775 Da
Subcellular location: Cell membrane; Multi-pass membrane protein
Developmental stage: At 24 weeks of gestation, fragments of radial glial fibers are positive within the cortical plate
and subplate of allocortical areas. These positive fragments often appear enlarged as varicosities and some of them
terminate at blood vessels. Between 28 and 30 weeks of gestation, all iso- and allocortical areas contain
immunolabeled radial glial fibers revealing curvature next to sulci. After 32 weeks of gestation, radial glial fibers
gradually disappear; instead positive transitional stages between radial glia and astrocytes were found
Secondary accessions: Q6NW11
Alternative splicing: 2 isoforms:  Q9H228-1   Q9H228-2   

Explore the universe of human proteins at neXtProt for S1PR5: NX_Q9H228

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q9H228

  • S1PR5 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins (2 alternative transcripts): 
    NP_001159687.1  NP_110387.1  

    ENSEMBL proteins: 
     ENSP00000328472   ENSP00000416915   ENSP00000464884  
    Reactome Protein details: Q9H228
    Human Recombinant Protein Products: 
    EMD Millipore Purified and/or Recombinant S1PR5 Protein
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    Browse OriGene full length recombinant human proteins expressed in human HEK293 cells
    OriGene Protein Over-expression Lysate (see all 2): S1PR5
    OriGene Custom Protein Services for S1PR5 
    GenScript Custom Purified and Recombinant Proteins Services for S1PR5
    Novus Biologicals S1PR5 Proteins
    Novus Biologicals S1PR5 Lysates
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Uscn Proteins for S1PR5

    Gene Ontology (GO): 2 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005886plasma membrane TAS--
    GO:0016021integral to membrane IEA--


    S1PR5 for ontologies           About GeneDecksing



    S1PR5 Antibody Products: 
    EMD Millipore Mono- and Polyclonal Antibodies for the study of S1PR5
    R&D Systems Antibodies for S1PR5 (S1P5/EDG-8)
    Browse OriGene Antibodies
    OriGene Custom Antibody Services for S1PR5 
    GenScript Custom Superior Antibodies Services for S1PR5
    Novus Biologicals S1PR5 Antibodies
    Search for Antibodies for S1PR5 at Abcam  
    Uscn Antibodies for S1PR5
    ThermoFisher Antibodies for S1PR5

    Assay Products for S1PR5: 
    Browse Kits and Assays available from EMD Millipore
    OriGene Custom Immunoassay Development
    Browse OriGene Fluorogenic Cell Assay Kits
    Browse R&D Systems for biochemical assays
    GenScript Custom Assay Services for S1PR5
    Browse Enzo Life Sciences for kits & assays
    Uscn ELISAs and CLIAs for S1PR5


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    S1PR5 for domains           About GeneDecksing

    4 InterPro domains/families:
     IPR005386 EDG8_S1P_rcpt
     IPR004061 S1P_rcpt
     IPR017452 GPCR_Rhodpsn_7TM
     IPR000276 GPCR_Rhodpsn

    Graphical View of Domain Structure for InterPro Entry Q9H228

    ProtoNet protein and cluster: Q9H228

    2 Blocks protein families:
    IPB004061 Sphingosine 1-phosphate receptor family signature
    IPB005386 EDG-8 sphingosine 1-phosphate receptor signature


    UniProtKB/Swiss-Prot: S1PR5_HUMAN, Q9H228
    Similarity: Belongs to the G-protein coupled receptor 1 family


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: S1PR5_HUMAN, Q9H228
    Function: Receptor for the lysosphingolipid sphingosine 1-phosphate (S1P). S1P is a bioactive lysophospholipid that
    elicits diverse physiological effect on most types of cells and tissues. Is coupled to both the G(i/0)alpha and G(12)
    subclass of heteromeric G-proteins (By similarity). May play a regulatory role in the transformation of radial glial
    cells into astrocytes and may affect proliferative activity of these cells

    miRNA
    Products:
        
    OriGene 3'-UTR Clone (see all 2): S1PR5
    Browse MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat S1PR5
    4 QIAGEN miScript miRNA Assays for microRNAs that regulate S1PR5:
    hsa-miR-3685 hsa-miR-155* hsa-miR-3918 hsa-miR-384
    SwitchGear 3'UTR luciferase reporter plasmidS1PR5 3' UTR sequence
    Inhib. RNA
    Products:
        
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for S1PR5 (see all 4)
    OriGene shRNA RFP: S1PR5
    OriGene siRNA: S1PR5
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat S1PR5

    Gene Editing
    Products:
    DNA2.0 Custom Protein Engineering Service for S1PR5

    Clone
    Products:
         
    EMD Millipore Clones for the Expression of S1PR5
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for S1PR5 (see all 4)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for S1PR5 (see all 2)
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector (see all 2): S1PR5 (NM_030760)
    Browse Sino Biological Human cDNA Clones
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for S1PR5
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat S1PR5 

    Cell Line
    Products:
         
    GenScript Custom overexpressing Cell Line Services for S1PR5
    Search LifeMap BioReagents cell lines for S1PR5

    In Situ Assay
    Products:
       

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for S1PR5

    Gene Ontology (GO): 2 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0004930G-protein coupled receptor activity ----
    GO:0038036sphingosine-1-phosphate receptor activity IEA--


    S1PR5 for ontologies           About GeneDecksing


    3 GenomeRNAi human phenotypes for S1PR5:
     Decreased viability of wild-ty  Increased gamma-H2AX phosphory  Synthetic lethal with Ras 

    Animal Models:
         4 MGI mutant phenotypes (inferred from 2 alleles(MGI details for S1pr5):
     cellular  hematopoietic system  immune system  nervous system 

    S1PR5 for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/6 super-pathways (see all 6About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Class A/1 (Rhodopsin-like receptors)
    Class A/1 (Rhodopsin-like receptors)1.00
    G alpha (i) signalling events0.44
    GPCR ligand binding0.75
    Neuroactive ligand-receptor interaction0.38
    2Signaling by GPCR
    Signaling by GPCR1.00
    Signal Transduction0.56
    GPCR downstream signaling0.89
    3S1P4 pathway
    S1P4 pathway1.00
    S1P5 pathway0.57
    4Lysosphingolipid and LPA receptors
    Lysosphingolipid and LPA receptors1.00
    5Signal Transduction of S1P Receptor
    Signal Transduction of S1P Receptor1.00

    Pathway sources
    See GeneCards unified pathways
    Show all pathways


    4 BioSystems Pathways for S1PR5 
        Signal Transduction of S1P Receptor
    S1P4 pathway
    S1P5 pathway
    Sphingosine 1-phosphate (S1P) pathway

    5/7        Reactome Pathways for S1PR5 (see all 7)
        GPCR downstream signaling
    Signal Transduction
    Signaling by GPCR
    G alpha (i) signalling events
    Lysosphingolipid and LPA receptors


    1         Kegg Pathway  (Kegg details for S1PR5):
        Neuroactive ligand-receptor interaction


    S1PR5 for pathways           About GeneDecksing

    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for S1PR5

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/149 Interacting proteins for S1PR5 (Q9H2283 ENSP000003284724) via UniProtKB, MINT, STRING, and/or I2D (see all 149)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    GNAO1P094713, ENSP000002624934I2D: score=1 STRING: ENSP00000262493
    SGPP1Q9BX953, ENSP000002472254I2D: score=1 STRING: ENSP00000247225
    GNA12Q031133, ENSP000002753644I2D: score=1 STRING: ENSP00000275364
    GNAI1P630963, ENSP000003430274I2D: score=1 STRING: ENSP00000343027
    ADCY2ENSP000003429524STRING: ENSP00000342952
    About this table

    Gene Ontology (GO): 2 biological process terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0007186G-protein coupled receptor signaling pathway ----
    GO:0045664regulation of neuron differentiation IEA--


    S1PR5 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    S1PR5 for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Compounds for S1PR5 available from Tocris Bioscience    About this table
    CompoundAction CAS #
    Sphingosine-1-phosphateEndogenous agonist at S1P1-5[26993-30-6]

    1 HMDB Compound for S1PR5    About this table
    CompoundSynonyms CAS #PubMed Ids
    Sphingosine(-)-D-erythro-Sphingosine (see all 7)123-78-4--
    1 Novoseek chemical compound relationship for S1PR5 gene    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    sphingosine 78.3 7 19211033 (2)

    Search CenterWatch for drugs/clinical trials and news about S1PR5 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for S1PR5 gene (2 alternative transcripts): 
    NM_001166215.1  NM_030760.4  

    Unigene Cluster for S1PR5:

    Sphingosine-1-phosphate receptor 5
    Hs.501561  [show with all ESTs]
    Unigene Representative Sequence: NM_001166215
    3 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000333430(uc002mot.2) ENST00000439028(uc002mou.2) ENST00000590601


    miRNA
    Products:
         
    OriGene 3'-UTR Clone (see all 2): S1PR5
    Browse OriGene MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat S1PR5
    4 QIAGEN miScript miRNA Assays for microRNAs that regulate S1PR5:
    hsa-miR-3685 hsa-miR-155* hsa-miR-3918 hsa-miR-384
    SwitchGear 3'UTR luciferase reporter plasmidS1PR5 3' UTR sequence
    Inhib. RNA
    Products:
         
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for S1PR5 (see all 4)
    OriGene shRNA RFP: S1PR5
    OriGene siRNA: S1PR5
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat S1PR5
    Clone
    Products:
         
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for S1PR5 (see all 4)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for S1PR5 (see all 2)
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector (see all 2): S1PR5 (NM_030760)
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for S1PR5
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat S1PR5 
    Primer
    Products:
        
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for S1PR5
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat S1PR5
      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat S1PR5
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat S1PR5

    Additional cDNA sequence: 

    AF088014.1 AF331840.1 AF331841.1 AF331842.1 AK074661.1 AK094880.1 BC034703.1 BC067781.1 

    7 DOTS entries:

    DT.101968559  DT.405571  DT.97839596  DT.100022816  DT.97839597  DT.121453900  DT.100728241 

    24/49 AceView cDNA sequences (see all 49):

    AF088014 AF331841 NM_030760 BX349015 BE646254 BF446252 CR619597 CB049904 
    AF331842 BX282038 AK074661 BI604025 BI839010 BC034703 AI420856 BC067781 
    BI752293 N47089 AI814092 N63601 AI635837 AI439969 AF331840 BI820384 

    GeneLoc Exon Structure

    3 Alternative Splicing Database (ASD) splice patterns (SP) for S1PR5    About this scheme

    ExUns: 1 ^ 2a · 2b · 2c ^ 3a · 3b · 3c
    SP1:        -     -     -                     
    SP2:                    -                     
    SP3:                                          


    ECgene alternative splicing isoforms for S1PR5

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    S1PR5 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: GGAGGTTGAA

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image
    See S1PR5 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for S1PR5

    SOURCE GeneReport for Unigene cluster: Hs.501561

    UniProtKB/Swiss-Prot: S1PR5_HUMAN, Q9H228
    Tissue specificity: Widely expressed in the brain, most prominently in the corpus callosum, which is predominantly
    white matter. Detected in spleen, peripheral blood leukocytes, placenta, lung, aorta and fetal spleen. Low-level
    signal detected in many tissue extracts. Overexpressed in leukemic large granular lymphocytes. Isoform 1 is
    predominantly expressed in peripheral tissues. Isoform 2 is expressed in brain, spleen and peripheral blood leukocytes

        SABiosciences Expression via Pathway-Focused PCR Array including S1PR5: 
              G Protein Coupled Receptors 384HT in human mouse rat

    Primer
    Products:
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for S1PR5
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat S1PR5
    QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat S1PR5
    QIAGEN QuantiFast Probe-based Assays in human, mouse, rat S1PR5
    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for S1PR5

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of chordates.

    Orthologs for S1PR5 gene from 2/9 species (see all 9)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    lizard
    (Anolis carolinensis)
    Reptilia S1PR56
    --
    53(a)
    1 ↔ 1
    2(80239345-80240472)
    zebrafish
    (Danio rerio)
    Actinopterygii s1pr5b6
    s1pr5a6
    sphingosine-1-phosphate receptor 5a
    49(a)
    44(a)
    1 ↔ 1
    possible ortholog
    6(75011-79866)
    3(19186846-19190333)


    ENSEMBL Gene Tree for S1PR5 (if available)
    TreeFam Gene Tree for S1PR5 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for S1PR5 gene
    CNR12  GPR122  ENSG000002675342  LPAR22  CNR22  S1PR12  S1PR32  MC1R2  
    LPAR12  MC3R2  MC5R2  MC2R2  GPR32  MC4R2  S1PR42  GPR62  
    LPAR32  
    11 SIMAP similar genes for S1PR5 using alignment to 3 protein entries:     S1PR5_HUMAN (see all proteins):
    EDG1    S1PR3    S1PR1    S1PR2    S1PR4    EDG2
    LPAR1    LPAR3    LPAR2    GPR12    GPR3

    S1PR5 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/147 NCBI SNPs in S1PR5 are shown (see all 147    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 19 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs116671451,2
    H--10208561(+) gcccaG/Agctgg 1 -- int14Minor allele frequency- A:0.00NS EA 418
    rs762751511,2
    C,--10208571(+) GAGTGC/TAGTGG 1 -- int11Minor allele frequency- T:0.50WA 2
    rs1460394971,2
    --10622985(+) TGTTGA/CCCAGG 2 -- int10--------
    rs72600341,2
    C,A,--10623003(+) CAAACT/CCCCAG 2 -- int13Minor allele frequency- C:0.07WA NA 240
    rs1395618211,2
    --10623013(+) GCCTCA/TATCGA 2 -- int10--------
    rs711620821,2
    C--10623093(-) GGTCTAA/-AAAAA 2 -- int11Minor allele frequency- -:0.00NA 2
    rs1881803041,2
    --10623144(+) AGGCTG/TGAGTG 2 -- int10--------
    rs1809326521,2
    --10623156(+) AGCTCC/TTTGCA 2 -- int10--------
    rs1856156501,2
    --10623296(+) AAACTA/GGTCTC 2 -- int10--------
    rs1497236981,2
    --10623371(+) GTCACA/GGCACC 2 -- int10--------

    HapMap Linkage Disequilibrium report for S1PR5 (10623418 - 10628668 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
          Database of Genomic Variants (DGV) variations for S1PR5: --

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing S1PR5
    DNA2.0 Custom Variant and Variant Library Synthesis for S1PR5

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    S1PR5 for disorders           About GeneDecksing

    OMIM gene information: 605146    OMIM disorders: --

    7 diseases for S1PR5:    About MalaCards
    corpus callosum    pertussis    prostate cancer    obesity
    prostatitis    leukemia    neuronitis

    Human Genome Epidemiology (HuGE) Navigator: S1PR5 (1 document)

    Export disorders for S1PR5 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for S1PR5 gene, integrated from 9 sources (see all 29):
    (articles sorted by number of sources associating them with S1PR5)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Characterization of the human and mouse sphingosine 1-phosphate receptor, S1P5 (Edg-8): structure-activity relationship of sphingosine1-phosphate receptors. (PubMed id 11705398)1, 2, 9 Im D.-S.... Lynch K.R. (2001)
    2. Evidence for the presence of the sphingosine-1-phosphate receptor Edg-8 in human radial glial fibers. (PubMed id 15530552)1, 2, 9 Ulfig N. and Briese M. (2004)
    3. Characterization of a human sphingosine-1-phosphate receptor gene (S1P5) and its differential expression in LGL leukemia. (PubMed id 12427546)1, 2, 9 Kothapalli R.... Loughran T.P. Jr. (2002)
    4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    5. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1, 2 Ota T.... Sugano S. (2004)
    6. The DNA sequence and biology of human chromosome 19. (PubMed id 15057824)1, 2 Grimwood J.... Lucas S.M. (2004)
    7. Identification of G protein-coupled receptor genes from the human genome sequence. (PubMed id 12044878)1, 2 Takeda S.... Mitaku S. (2002)
    8. Comparative analysis of human and rat S1P(5) (edg8): differential expression profiles and sensitivities to antagonists. (PubMed id 12234605)1, 2 Niedernberg A.... Kostenis E. (2002)
    9. Characterization of a novel sphingosine 1-phosphate receptor, Edg-8. (PubMed id 10799507)1, 3 Im D.S....Lynch K.R. (2000)
    10. The sphingosine 1-phosphate receptor 5 and sphingosine kinases 1 and 2 are localised in centrosomes: possible role in regulating cell division. (PubMed id 19211033)1, 9 Gillies L....Pyne S. (2009)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 53637 HGNC: 14299 AceView: EDG8 Ensembl:ENSG00000180739 euGenes: HUgn53637
    ECgene: S1PR5 Kegg: 53637 H-InvDB: S1PR5

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for S1PR5 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for S1PR5 gene:
    Search GeneIP for patents involving S1PR5

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences),
    In Situ Hybridization Assays from
    Advanced Cell Diagnostics
    About This Section

     Browse Kits and Assays available from EMD Millipore
     EMD Millipore Mono- and Polyclonal Antibodies for the study of S1PR5
     Browse Small Molecules at EMD Millipore
     EMD Millipore Purified and/or Recombinant S1PR5 Protein
     EMD Millipore Clones for the Expression of S1PR5
     Browse for Gene Knock-down Tools from EMD Millipore
     
     EMD Millipore Custom Antibody & Bulk Services
     EMD Millipore Preclinical / Clinical Development Services
     EMD Millipore Immunoassay Services
     EMD Millipore Target Screening & Profiling Services

      
     Antibodies for S1PR5 (S1P5/EDG-8)   Browse Cell Culture Products  
     Browse ELISAs   Browse Flow Cytometry Kits  
     Browse Primer Pairs   Browse Kinase Activity Assays/Reagents  
     Browse ELISpot Kits/Development Modules   Browse TFB/Immunoprecipitation Assays  
     Browse Apoptosis Detection Kits/Reagents   Browse Ubiquitin Proteasome Pathway (UPP) Assay Kits/Reagents  
     Browse DNA Damage/Repair Kits/Reagents   Browse Multiplex/Array Assay Kits/Reagents  
     Browse Cell Selection/Detection Kits/Reagents   Browse Secondary Antibodies/Controls/Staining Reagents  
     Browse Phosphatase Activity Assays/Reagents   Browse Recombinant/Natural Proteins  
     Browse OriGene Antibodies   OriGene shRNA RFP for S1PR5  
     OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for S1PR5   OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for S1PR5  
     OriGene Protein Over-expression Lysate for S1PR5   Browse OriGene Fluorogenic Cell Assay Kits  
     OriGene siRNA for S1PR5   OriGene 3'-UTR Clone for S1PR5  
     OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for S1PR5   OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for S1PR5  
     Browse OriGene GFP tagged cDNA clones in CMV expression vector   Browse OriGene MicroRNA Expression Plasmids  
     Browse OriGene basic RS shRNAs   Browse OriGene validated miRNA SYBR primer pairs  
     Browse OriGene full length recombinant human proteins expressed in human HEK293 cells   OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling  
     OriGene Custom Antibody Services for S1PR5   OriGene Custom Protein Services for S1PR5  
     OriGene Custom Immunoassay Development  

     
     
     QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat S1PR5
     QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing S1PR5
     QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat S1PR5
     QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat S1PR5
     QIAGEN QuantiFast Probe-based Assays in human, mouse, rat S1PR5
     QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat S1PR5
     GenScript Custom Purified and Recombinant Proteins Services for S1PR5 GenScript cDNA clones with any tag delivered in your preferred vector for S1PR5
     GenScript Custom Assay Services for S1PR5 GenScript Custom Superior Antibodies Services for S1PR5
     GenScript Custom overexpressing Cell Line Services for S1PR5 CloneReady with Over 120,000 Genes
     Gene Synthesis: Any Gene in Any Vector Vector-based siRNA and miRNA, Ready for Transfection
     Gene Mutant Library, Variants up to 10^11 Plasmid Preparation
     Custom Peptide Services
     Search for Antibodies & Assays

     Regulatory tfbs in S1PR5 promoter
     Search Chromatin IP Primers for S1PR5
     RT2 qPCR Primer Assay in human, mouse, rat S1PR5
     Search GNC Networks for S1PR5
     SABiosciences PCR Arrays including human, mouse, rat S1PR5
     Tocris compounds for S1PR5
     Browse Sino Biological Proteins and Antibodies
     Browse Sino Biological cDNA Clones
     Antibodies/Proteins Production Services
     Rabbit Monoclonal Antibody Platform
     Bulk Purchasing
     Search www.enzolifesciences.com for proteins, assays, substrates, inhibitors & antibodies
     Novus Tissue Slides
     S1PR5 antibodies
     S1PR5 proteins
     S1PR5 lysates
     Search for Antibodies for S1PR5 at Abcam
     See all of Abcam's Antibodies, Kits and Proteins for S1PR5
     Custom Antibody / Protein Production Service
     Bulk Purchasing
     Advantages of Rabbit Monoclonal antibodies
     Abcam protocols and scientific support
     Browse ProSpec Recombinant Proteins




     S1PR5 Proteins, Antibodies, CLIAs, and ELISAs
     Search LifeMap BioReagents cell lines for S1PR5
     Gene Synthesis
     Protein Engineering
     Variant Library Synthesis
     Codon Optimization
     Protein Production and Purification
     Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for S1PR5
     SwitchGear 3'UTR luciferase reporter plasmids for S1PR5
     SwitchGear Promoter luciferase reporter plasmids for S1PR5
     ThermoFisher Antibodies for S1PR5
     Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat S1PR5
           
    GeneCards Homepage - Last full update: 18 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 27 Apr 2013

    View Random Gene

    Category
    VWF
    (GIFTS: 73)
    von Willebrand factor
    GIFtS Group
    The GeneCards human gene database gene index: 1 3 5 6 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 


    Developed at the Crown Human Genome Center, Department of Molecular Genetics, the Weizmann Institute of Science

    Hot genes      Disease genes      S1PR5 gene at Home site.
    hostname: 356980-web2.xennexinc.com index build: 100 solr: 1.4