S100A7L2 Gene
protein-coding GIFtS: 32
GCID: GC01M153409
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S100 calcium binding protein A7-like 2
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Aliases
for S100A7L2 gene
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc,
7Ensembl,
8DME,
9miRBase,
and/or 10fRNAdb)
About This Section
|
| Aliases |
|---|
| S100 Calcium Binding Protein A7-Like 21 2 | | S100 Calcium-Binding Protein A7-Like 22 3 | | S100a7b2 | | S100a7b2 | | Protein S100-A7-Like 22 | | S100A7B3 |
Export aliases for S100A7L2 gene to outside databasesPrevious GC identifers: GC01M150626 GC01U901079 GC01M151677 GC01M124772 |
Summaries
for S100A7L2 gene(According to Entrez Gene,
Tocris Bioscience,
Wikipedia's
Gene Wiki,
PharmGKB,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
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Genomic Views
for S100A7L2 gene
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69),
Regulatory elements and Epigenetics data according to
QIAGEN,
SABiosciences, and/or
SwitchGear Genomics)
About This Section
| RefSeq DNA sequence:- NC_000001.10 NC_018912.1 NT_004487.19
Regulatory elements:
 SABiosciences Regulatory transcription factor binding sites in the S100A7L2 gene promoter:
c-Fos AP-1 NRSF form 1 c-Jun LUN-1 NRSF form 2
Other transcription factors
Search SABiosciences Chromatin IP Primers for S100A7L2
Epigenetics:
| | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat S100A7L2 |
Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track
Entrez Gene cytogenetic band: 1q21.3 Ensembl cytogenetic band: 1q21.3 HGNC cytogenetic band: 1q21.3S100A7L2 Gene in genomic location: bands according to Ensembl, locations according to
 (and/or Entrez Gene and/or Ensembl if different)
GeneLoc information about chromosome 1 GeneLoc Exon Structure GeneLoc location for GC01M153409: view genomic region
(about GC identifiers)
Start:
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153,409,471 bp from pter |
End:
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153,412,503 bp from pter |
Size:
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3,033 bases |
Orientation:
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minus strand |
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Proteins
for S100A7L2 gene
(According to
1UniProtKB,
HORDE,
neXtProt,
Ensembl,
and/or Reactome,
Modification sites according to 2PhosphoSitePlus,
Specific Peptides from DME,
Protein expression images according to data from SPIRE MOPED and PaxDb,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from
EMD Millipore,
R&D Systems,
GenScript,
Enzo Life Sciences,
OriGene,
Novus Biologicals,
Sino Biological,
ProSpec, and/or
Uscn,
Biochemical Assays by
EMD Millipore,
R&D Systems,
OriGene,
GenScript,
Cell Signaling Technology,
Enzo Life Sciences, and/or
Uscn,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene,
Antibodies by
EMD Millipore,
R&D Systems,
GenScript,
Cell Signaling Technology,
OriGene,
Novus Biologicals,
Thermo Fisher Scientific,
Abcam, and/or
Uscn)
About This Section
|
UniProtKB/Swiss-Prot: S1A7B_HUMAN, Q5SY68 (See
protein sequence)Recommended Name: Protein S100-A7-like 2 Size: 101 amino acids; 11302 DaExplore the universe of human proteins at neXtProt for S100A7L2: NX_Q5SY68
S100A7L2 Protein expression data from MOPED and PaxDb: About this image 
REFSEQ proteins: NP_001038944.2
ENSEMBL proteins: ENSP00000357714 ENSP00000357713 ENSP00000405610
Human Recombinant Protein Products:
S100A7L2 Antibody Products:
Assay Products for S100A7L2: |
Protein
Domains /
Families
for S100A7L2 gene(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
|
S100A7L2 for domains About GeneDecksing
3 InterPro domains/families:Graphical View of Domain Structure for InterPro Entry Q5SY68ProtoNet protein and cluster: Q5SY68 UniProtKB/Swiss-Prot: S1A7B_HUMAN, Q5SY68Similarity: Belongs to the S-100 familySimilarity: Contains 2 EF-hand domains |
Function
for S100A7L2 gene
(According to 1UniProtKB,
Genatlas,
LifeMap Discovery™,
IUBMB, and/or
2DME,
Human phenotypes from GenomeRNAi,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene,
RNAi from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
microRNA from QIAGEN,
Gene Editing from DNA2.0,
Clones from EMD Millipore,
OriGene,
SwitchGear Genomics,
GenScript,
Sino Biological,
DNA2.0,
and Vector BioLabs,
Cell Lines from GenScript,
LifeMap BioReagents,
In Situ Hybridization Assays from Advanced Cell Diagnostics,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene.)
About This Section
|
Clone
Products: |  | Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore | |  | OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for S100A7L2
OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for S100A7L2
OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling 
| |  | GenScript: all cDNA clones in your preferred vector: S100A7L2 (NM_001045479) | |  | Browse Sino Biological Human cDNA Clones | |  | DNA2.0 Custom Codon Optimized Gene
Synthesis Service for S100A7L2 | |  | Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat S100A7L2 |
Gene Ontology (GO): 1 molecular function term (GO ID links to tree view): About this table | GO ID | Qualified GO term | Evidence | PubMed IDs |
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| GO:0005509 | calcium ion binding |
IEA | -- |
S100A7L2 for ontologies About GeneDecksing
|
Pathways & Interactions
for S100A7L2 gene
(Pathways according to
EMD Millipore,
R&D Systems,
Cell Signaling Technology,
KEGG,
PharmGKB,
BioSystems,
Reactome,
Tocris Bioscience,
GeneGo (Thomson Reuters),
QIAGEN,
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Interaction Networks according to
SABiosciences,
and/or STRING,
Interactions according to 1UniProtKB,
2MINT,
3I2D, and/or
4STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene).
About This Section
|
Interactions:
Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for S100A7L2
|
Drugs & Compounds
for S100A7L2 gene(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
EMD Millipore, Tocris Bioscience
HMDB,
BitterDB, and/or
Novoseek, and Drugs according to
DrugBank,
Enzo Life Sciences, and/or
PharmGKB, with drugs/clinical trials/news
search links to CenterWatch)
About This Section
|
 Browse Tocris compounds for S100A7L2
Search CenterWatch for drugs/clinical trials and news about S100A7L2 / S1A7B
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Transcripts
for S100A7L2 gene(Secondary structures according to
fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
transcript ids from Ensembl
with links to UCSC,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
shRNA from
OriGene,
microRNA from QIAGEN,
Tagged/untagged cDNA clones from
OriGene,
SwitchGear Genomics,
GenScript,
DNA2.0,
Vector BioLabs,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN
)
About This Section
|
REFSEQ mRNAs for S100A7L2 gene: NM_001045479.1 Unigene Cluster for S100A7L2: S100 calcium binding protein A7-like 2 Hs.647713 Unigene Representative Sequence: NM_0010454793 Ensembl transcripts including schematic representations, and UCSC links where relevant: ENST00000368725 ENST00000368724 ENST00000453814(uc010pdx.2)
Clone
Products: | | OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for S100A7L2
OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for S100A7L2
OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling
| | | GenScript: all cDNA clones in your preferred vector: S100A7L2 (NM_001045479) | | | DNA2.0 Custom Codon Optimized Gene
Synthesis Service for S100A7L2 | | | Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat S100A7L2 |
Primer
Products: | | OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for S100A7L2
Browse OriGene validated miRNA SYBR primer pairs
| | | SABiosciences RT2 qPCR Primer Assay in human, mouse / rat S100A7L2 | | | QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat S100A7L2 | | | QIAGEN QuantiFast Probe-based Assays in human, mouse, rat S100A7L2 |
GeneLoc Exon Structure
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Expression
for S100A7L2 gene
(RNA expression data according to
H-InvDB,
NONCODE,
miRBase, and
RNAdb,
Expression images according to data from
BioGPS,
Illumina Human BodyMap, and
CGAP
SAGE,
Sets of similar genes according to GeneDecks,
in vivo and in vitro expression data from LifeMap Discovery™,
plus additional links to
Genevestigator, and/or
SOURCE, and/or
BioGPS, and/or
UniProtKB,
PCR Arrays from
SABiosciences,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN,
In Situ Hybridization Assays from Advanced Cell Diagnostics)
About This Section
| S100A7L2 expression in normal human tissues (normalized intensities)
See probesets specificity/sensitivity at GeneAnnot
About this imageBioGPS
CGAP TAG: GACAATAAAG
About this image
See S100A7L2 Protein Expression from SPIRE MOPED and PaxDB
SOURCE GeneReport for Unigene cluster: Hs.647713
SABiosciences Custom PCR Arrays for S100A7L2
Primer
Products: | | OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for S100A7L2
Browse OriGene validated miRNA SYBR primer pairs
| | | SABiosciences RT2 qPCR Primer Assay in human, mouse / rat S100A7L2 | | | QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat S100A7L2 | | | QIAGEN QuantiFast Probe-based Assays in human, mouse, rat S100A7L2 |
Orthologs
for S100A7L2 gene
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
,
5MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase,
and/or
6Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam)
About This Section
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ENSEMBL Gene Tree for S100A7L2 (if available)
TreeFam Gene Tree for S100A7L2 (if available) |
Paralogs
for S100A7L2 gene(Paralogs according to
1HomoloGene,
2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
About This Section
| Paralogs for S100A7L2 gene
- S100A72 S100A7A2
6 SIMAP similar genes for S100A7L2 using alignment to 2 protein entries: S1A7B_HUMAN (see all proteins):S100A7A S100A7 S100A10 S100A6 S100A11 S100A7L3
S100A7L2 for paralogs About GeneDecksing
|
Genomic Variants
for S100A7L2 gene(SNPs/Variants according to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE,
UniProtKB, and
DNA2.0,
Linkage Disequilibrium by HapMap,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB), Blood group antigen gene mutations by BGMUT,
Resequencing Primers from QIAGEN,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
About This Section
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| Genomic Data | Transcription Related Data | Allele Frequencies | | SNP ID | Valid | Clinical
significance | Chr 1 pos | Sequence | # | AA
Chg | Type | More | # | Allele
freq | Pop | Total
sample | More |
|---|
HapMap Linkage Disequilibrium report for S100A7L2 (153409471 - 153412503 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
Database of Genomic Variants (DGV): 1 variation for S100A7L2
1 CNV: 6787 | SABiosciences Cancer Mutation PCR Assays |
| | QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing S100A7L2 |
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Disorders
/ Diseases
for S100A7L2 gene
(in which this Gene is Involved, According to MalaCards,
OMIM, UniProtKB,
the University of Copenhagen DISEASES
database,
Genatlas, GeneTests,
GAD,
HuGE Navigator,
and/or TGDB.)
About This Section
| -- |
Publications
for S100A7L2 gene (in
PubMed.
Associations of this gene to articles via
1Entrez Gene,
2UniProtKB/Swiss-Prot,
3HGNC,
4GAD,
5PharmGKB,
6HMDB,
7DrugBank,
8UniProtKB/TrEMBL,
9 Novoseek, and/or
10fRNAdb)
About This Section
|
PubMed articles for S100A7L2 gene integrated from 9 sources:
(articles sorted by number of sources associating them with S100A7L2) | |  | Utopia: connect your pdf to the dynamic
world of online information |
- The DNA sequence and biological annotation of human chromosome 1. (PubMed id 16710414)1, 2 Gregory S.G.... Bentley D.R. (2006)
- Genomic and phylogenetic analysis of the S100A7 (psoriasin) gene duplications within the region of the S100 gene cluster on human chromosome 1q21. (PubMed id 12664160)1, 2 Kulski J.K.... Bellgard M. (2003)
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External Searches for S100A7L2 gene
(in PubMed,
OMIM, and NCBI Bookshelf)
About This Section
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Genome Databases showing S100A7L2 gene
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
Kegg,
and/or
H-InvDB)
About This Section
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Other Databases showing S100A7L2 gene
(According to HUGE)
About This Section
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Specialized Databases showing S100A7L2 gene(According to PharmGKB,
ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section
|
| Name | Description |
| PharmGKB entry for S100A7L2 | Pharmacogenomics, SNPs, Pathways |
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About This Section
| Patent Information for S100A7L2 gene:
Search GeneIP for patents involving S100A7L2
GeneCards and IP:
Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
|
Products
for S100A7L2 gene(Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or
Enzo Life Sciences),
In Situ Hybridization Assays from
Advanced Cell Diagnostics
About This Section
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| | |  | Browse OriGene Antibodies | | OriGene shRNA RFP for S100A7L2 | | | OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for S100A7L2 | | OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for S100A7L2 | | | OriGene Protein Over-expression Lysate for S100A7L2 | | Browse OriGene Fluorogenic Cell Assay Kits | | | OriGene siRNA for S100A7L2 | | Browse 3'-UTR reporter clones for miRNA target validation | | | OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for S100A7L2 | | OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for S100A7L2 | | | Browse OriGene GFP tagged cDNA clones in CMV expression vector | | Browse OriGene MicroRNA Expression Plasmids | | | Browse OriGene basic RS shRNAs | | Browse OriGene validated miRNA SYBR primer pairs | | | OriGene Purified Protein for S100A7L2 | | OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
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| | | QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat S100A7L2 | | | QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing S100A7L2 | | | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat S100A7L2 | | | QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat S100A7L2 | | | QIAGEN QuantiFast Probe-based Assays in human, mouse, rat S100A7L2 | | | QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat S100A7L2 |
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 | | | S100A7L2 Proteins, Antibodies, CLIAs, and ELISAs |
| | | |  |  |  | | | | Search ThermoFisher Antibodies for S100A7L2 |
| | | Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat S100A7L2 |
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