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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

S100A12 Gene

protein-coding   GIFtS: 56
GCID: GC01M153346

S100 calcium binding protein A12

(Previous names: S100 calcium-binding protein A12 (calgranulin C), S100...)
 Explore 44 diseases affiliated with
S100A12 via our new
 Human Malady Compendium 
Biological research products
for S100A12
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
S100 Calcium Binding Protein A121 2     Migration Inhibitory Factor-Related Protein 62 3
CAAF11 2 3 5     Neutrophil S100 Protein2 3
CGRP1 2 3 5     EN-RAGE2 3
CAGC1 2 3     MRP-62 3
P61     S100 Calcium Binding Protein A12 (Calgranulin C)1
ENRAGE1 2     Calgranulin C2
MRP61 2     Calgranulin-C3
S100 Calcium-Binding Protein A12 (Calgranulin C)1 2     Protein S100-A122
Calcium-Binding Protein In Amniotic Fluid 12 3     Calgranulin-C3
Extracellular Newly Identified RAGE-Binding Protein2 3     S100 Calcium-Binding Protein A123

External Ids:    HGNC: 104891   Entrez Gene: 62832   Ensembl: ENSG000001632217   OMIM: 6031125   UniProtKB: P805113   

Export aliases for S100A12 gene to outside databases

Previous GC identifers: GC01M151162 GC01M149128 GC01M150121 GC01M150562 GC01M150159 GC01M151612 GC01M124709


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for S100A12:
The protein encoded by this gene is a member of the S100 family of proteins containing 2 EF-hand calcium-binding
motifs. S100 proteins are localized in the cytoplasm and/or nucleus of a wide range of cells, and involved in the
regulation of a number of cellular processes such as cell cycle progression and differentiation. S100 genes include at
least 13 members which are located as a cluster on chromosome 1q21. This protein is proposed to be involved in
specific calcium-dependent signal transduction pathways and its regulatory effect on cytoskeletal components may
modulate various neutrophil activities. (provided by RefSeq, Jul 2008)

UniProtKB/Swiss-Prot: S10AC_HUMAN, P80511
Function: S100A12 is a calcium-, zinc- and copper-binding protein which plays a prominent role in the regulation of
inflammatory processes and immune response. Its proinflammatory activity involves recruitment of leukocytes, promotion
of cytokine and chemokine production, and regulation of leukocyte adhesion and migration. Acts as an alarmin or a
danger associated molecular pattern (DAMP) molecule and stimulates innate immune cells via binding to receptor for
advanced glycation endproducts (AGER). Binding to AGER activates the MAP-kinase and NF-kappa-B signaling pathways
leading to production of proinflammatory cytokines and up-regulation of cell adhesion molecules ICAM1 and VCAM1. Acts
as a monocyte and mast cell chemoattractant. Can stimulate mast cell degranulation and activation which generates
chemokines, histamine and cytokines inducing further leukocyte recruitment to the sites of inflammation. Can inhibit
the activity of matrix metalloproteinases; MMP2, MMP3 and MMP9 by chelating Zn(2+) from their active sites. Possesses
filariacidal and filariastatic activity. Calcitermin possesses antifungal activity against C.albicans and is also
active against E.coli and P.aeruginosa but not L.monocytogenes and S.aureus

Gene Wiki entry for S100A12


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000001.10  NC_018912.1  NT_004487.19  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the S100A12 gene promoter:
         RFX1   AML1a   Tal-1   AP-1   MyoD   Lmo2   LCR-F1   E47   GATA-1   TGIF   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidS100A12 promoter sequence
   Search SABiosciences Chromatin IP Primers for S100A12

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat S100A12


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 1q21   Ensembl cytogenetic band:  1q21.3   HGNC cytogenetic band: 1q21

S100A12 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
S100A12 gene location

GeneLoc information about chromosome 1         GeneLoc Exon Structure

GeneLoc location for GC01M153346:  view genomic region     (about GC identifiers)

Start:
153,346,184 bp from pter      End:
153,348,125 bp from pter
Size:
1,942 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: S10AC_HUMAN, P80511 (See protein sequence)
Recommended Name: Protein S100-A12  
Size: 92 amino acids; 10575 Da
Subunit: Homodimer. Homooligomer (tetramer or hexamer) in the presence of calcium, zinc and copper ions. Interacts with
AGER and both calcium and zinc are essential for the interaction. Interacts with CACYBP in a calcium-dependent manner
Subcellular location: Secreted. Cytoplasm. Cytoplasm, cytoskeleton. Cell membrane; Peripheral membrane protein.
Note=Predominantly localized in the cytoplasm. Upon elevation of the intracellular calcium level, translocated from
the cytoplasm to the cytoskeleton and the cell membrane. Upon neutrophil activation is secreted via a
microtubule-mediated, alternative pathway
Mass spectrometry: Mass=10444; Method=Electrospray; Range=2-92; Source=PubMed:11522286;
Mass spectrometry: Mass=1688.9; Method=MALDI; Range=78-92; Source=PubMed:11522286;
6/7 PDB 3D structures from and Proteopedia for S100A12 (see all 7):
1E8A (3D)        1GQM (3D)        1ODB (3D)        2WC8 (3D)        2WCB (3D)        2WCE (3D)    
Secondary accessions: P83219 Q5SY66 Q7M4R1

Explore the universe of human proteins at neXtProt for S100A12: NX_P80511

S100A12 Protein expression data from MOPED and PaxDb:    About this image 

Estimated protein expression log10 (pmol).

REFSEQ proteins: NP_005612.1  
ENSEMBL proteins: 
 ENSP00000357726  
Reactome Protein details: P80511
Human Recombinant Protein Products: 
Browse Purified and Recombinant Proteins at EMD Millipore
R&D Systems Recombinant & Natural Proteins for S100A12 (EN-RAGE/S100A12)
Browse recombinant and purified proteins available from Enzo Life Sciences
OriGene Purified Protein: S100A12
OriGene Protein Over-expression Lysate: S100A12
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Novus Biologicals S100A12 Proteins
Novus Biologicals S100A12 Lysates
Sino Biological Recombinant Protein for S100A12
ProSpec Recombinant Protein for S100A12
Uscn Proteins for S100A12

Gene Ontology (GO): 5/7 cellular component terms (GO ID links to tree view) (see all 7):    About this table

GO IDQualified GO termEvidencePubMed IDs
GO:0005576extracellular region TAS--
GO:0005626insoluble fraction ----
GO:0005634nucleus IDA15033494
GO:0005737cytoplasm IDA15033494
GO:0005829cytosol TAS18443896


S100A12 for ontologies           About GeneDecksing



S100A12 Antibody Products: 
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R&D Systems Antibodies for S100A12 (EN-RAGE/S100A12)
OriGene Antibodies (see all 2): S100A12
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Uscn Antibodies for S100A12
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GenScript Custom Assay Services for S100A12
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Uscn ELISAs and CLIAs for S100A12


(According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
About This Section

S100A12 for domains           About GeneDecksing

4 InterPro domains/families:
 IPR011992 EF-hand-like_dom
 IPR002048 EF_hand_Ca-bd
 IPR013787 S100_Ca-bd_sub
 IPR001751 S100/CaBP-9k_CS

Graphical View of Domain Structure for InterPro Entry P80511

ProtoNet protein and cluster: P80511

1 Blocks protein family: IPB001751 Calcium-binding protein

UniProtKB/Swiss-Prot: S10AC_HUMAN, P80511
Domain: The hinge domain contributes significantly to its chemotactic properties
Similarity: Belongs to the S-101 family
Similarity: Contains 2 EF-hand domains


(According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
About This Section

Function Summary:

     UniProtKB/Swiss-Prot: S10AC_HUMAN, P80511
Function: S100A12 is a calcium-, zinc- and copper-binding protein which plays a prominent role in the regulation of
inflammatory processes and immune response. Its proinflammatory activity involves recruitment of leukocytes, promotion
of cytokine and chemokine production, and regulation of leukocyte adhesion and migration. Acts as an alarmin or a
danger associated molecular pattern (DAMP) molecule and stimulates innate immune cells via binding to receptor for
advanced glycation endproducts (AGER). Binding to AGER activates the MAP-kinase and NF-kappa-B signaling pathways
leading to production of proinflammatory cytokines and up-regulation of cell adhesion molecules ICAM1 and VCAM1. Acts
as a monocyte and mast cell chemoattractant. Can stimulate mast cell degranulation and activation which generates
chemokines, histamine and cytokines inducing further leukocyte recruitment to the sites of inflammation. Can inhibit
the activity of matrix metalloproteinases; MMP2, MMP3 and MMP9 by chelating Zn(2+) from their active sites. Possesses
filariacidal and filariastatic activity. Calcitermin possesses antifungal activity against C.albicans and is also
active against E.coli and P.aeruginosa but not L.monocytogenes and S.aureus

     Genatlas biochemistry entry for S100A12:
S100 calcium binding protein A12,6.5kDa,expressed exclusively by granulocytes,independently from S100A8 and
S100A9,identical to corneal associated antigen (COAG)

miRNA
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Gene Editing
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In Situ Assay
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Search Advanced Cell Diagnostics for RNAscope RNA in situ hybridization assays for S100A12

Gene Ontology (GO): 5 molecular function terms (GO ID links to tree view):    About this table

GO IDQualified GO termEvidencePubMed IDs
GO:0005507copper ion binding TAS18443896
GO:0005509calcium ion binding TAS18443896
GO:0005515protein binding IPI19386136
GO:0008270zinc ion binding TAS18443896
GO:0050786RAGE receptor binding TAS18443896


S100A12 for ontologies           About GeneDecksing


4 GenomeRNAi human phenotypes for S100A12:
 Downregulation of NF-kappaB pa  Downregulation of NF-kappaB pa  Increased G1 DNA content  Increased cell death in breast 


(Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
About This Section

Unified GeneCards pathways  About this table 
See pathways by source

Super-pathwaycontained gene-specific pathways
1Immune System
Immune System1.00
Innate Immune System0.46
2Advanced glycosylation endproduct receptor signaling
Advanced glycosylation endproduct receptor signaling1.00

Pathway sources
See GeneCards unified pathways
Show all pathways


3        Reactome Pathways for S100A12
    Advanced glycosylation endproduct receptor signaling
Immune System
Innate Immune System



S100A12 for pathways           About GeneDecksing

Interactions:

    SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for S100A12

STRING Interaction Network Preview (showing 2 interactants - click image to see more details)

2 Interacting proteins for S100A12 (P805113 ENSP000003577264) via UniProtKB, MINT, STRING, and/or I2D
InteractantInteraction Details
GeneCardExternal ID(s)
AGERQ151093, ENSP000003642174I2D: score=3 STRING: ENSP00000364217
CACYBPQ9HB713, ENSP000003566524I2D: score=2 STRING: ENSP00000356652
About this table

Gene Ontology (GO): 5/14 biological process terms (GO ID links to tree view) (see all 14):    About this table

GO IDQualified GO termEvidencePubMed IDs
GO:0002548monocyte chemotaxis TAS18443896
GO:0006805xenobiotic metabolic process IDA11522286
GO:0006954inflammatory response IEA--
GO:0030593neutrophil chemotaxis TAS18443896
GO:0031640killing of cells of other organism IEA--


S100A12 for ontologies           About GeneDecksing



(Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
About This Section

S100A12 for compounds           About GeneDecksing

Browse Small Molecules at EMD Millipore
Browse drugs & compounds from Enzo Life Sciences

Browse Tocris compounds for S100A12

2 DrugBank Compounds for S100A12    About this table
CompoundSynonyms CAS #TypeActionsPubMed Ids
AmlexanoxAmlexanox [USAN:INN:JAN] (see all 3)68302-57-8targetantagonist16864903 11944917 10051426
Olopatadine-- 113806-05-6targetantagonist16864903 11944917

10 Novoseek chemical compound relationships for S100A12 gene    About this table
Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
amlexanox 73.2 3 16864903 (1), 11944917 (1)
olopatadine 59.9 8 16864903 (5), 11944917 (1)
ivig 41.2 4 15374807 (3), 19680167 (1)
capsaicin 21.6 4 18236014 (2), 7560753 (1), 16259736 (1)
calcium 18.6 28 19386136 (4), 15355353 (4), 11856825 (3), 8603881 (2) (see all 8)
copper 7.36 4 12645006 (2), 15251957 (1)
zinc 2.8 9 19386136 (5), 10569784 (1), 12645006 (1)
polyacrylamide 0 1 8934661 (1)
oligonucleotide 0 2 10219252 (1)
glucose 0 11 19833897 (3), 1573849 (1), 15531492 (1)

Search CenterWatch for drugs/clinical trials and news about S100A12 / S10AC 

(Secondary structures according to fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
RNAi Products from EMD Millipore,
siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
About This Section

REFSEQ mRNAs for S100A12 gene: 
NM_005621.1  

Unigene Cluster for S100A12:

S100 calcium binding protein A12
Hs.19413  [show with all ESTs]
Unigene Representative Sequence: AV758762
1 Ensembl transcript including schematic representation, and UCSC links where relevant:
ENST00000368737(uc001fbr.1)

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Inhib. RNA
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Browse for Gene Knock-down Tools from EMD Millipore
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OriGene shRNA RFP: S100A12
OriGene siRNA: S100A12
QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat S100A12
Clone
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  QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat S100A12
  QIAGEN QuantiFast Probe-based Assays in human, mouse, rat S100A12

Additional cDNA sequence: 

BC070294.1 D49549.1 D83664.1 X97859.1 

2 DOTS entries:

DT.412396  DT.100726392 

24/43 AceView cDNA sequences (see all 43):

D83664 NM_005621 AA321239 BX092856 X97859 AA707079 AW468479 AU100319 
AA313230 AI161013 BC070294 AW952195 AJ706429 AI718758 AI735194 AA700005 
AJ706621 AA984879 AI365228 AW016082 AJ713981 AI056983 AJ706518 AJ706358 

GeneLoc Exon Structure


(RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
About This Section

S100A12 expression in normal human tissues (normalized intensities)
See probesets specificity/sensitivity at GeneAnnot
About this imageBioGPS
CGAP TAG: --

Microarray
RNAseq (Illumina Body Map)
(100×FPKM)½
SAGE (Serial Analysis of Gene Expression)

About this image
See S100A12 Protein Expression from SPIRE MOPED and PaxDB
Genevestigator expression for S100A12

SOURCE GeneReport for Unigene cluster: Hs.19413

UniProtKB/Swiss-Prot: S10AC_HUMAN, P80511
Tissue specificity: Predominantly expressed by neutrophils, monocytes and activated macrophages. Expressed by
eosinophils and macrophages in asthmatic airways in regions where mast cells accumulate. Found in high concentrations
in the serum of patients suffering from various inflammatory disorders, such as rheumatoid arthritis, psoriatic
arthritis, Crohn's disease, ulcerative colitis, and Kawasaki disease

    SABiosciences Expression via Pathway-Focused PCR Arrays including S100A12: 
          cAMP / Ca2+ Signaling PathwayFinder in human mouse rat
          Inflammatory Response & Autoimmunity 384HT in human mouse rat

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QIAGEN QuantiFast Probe-based Assays in human, mouse, rat S100A12
In Situ
Assay Products:
 

 
Search Advanced Cell Diagnostics for RNAscope RNA in situ hybridization assays for S100A12

(Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
About This Section

This gene was present in the common ancestor of chordates.

Orthologs for S100A12 gene from 2/7 species (see all 7)    About this table
Organism Taxonomic
classification
Gene Description Human
Similarity
Orthology
Type
Details
chicken
(Gallus gallus)
Aves M126_CHICK6
Protein MRP-126
33(a)
1 ↔ 1
25(22835-24269)
lizard
(Anolis carolinensis)
Reptilia S100A126
S100A96
--
44(a)
38(a)
1 ↔ many
1 ↔ many
GL344021.1(33199-34917)
GL344021.1(47050-48259)


ENSEMBL Gene Tree for S100A12 (if available)
TreeFam Gene Tree for S100A12 (if available) 

(Paralogs according to 1HomoloGene,
2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
About This Section
Paralogs for S100A12 gene
S100A112  S100A62  S100A12  S100A82  S100A42  S100B2  S100A32  S100A102  
S100Z2  S100A52  S100P2  S100A22  S100A92  
18/24 SIMAP similar genes for S100A12 using alignment to 1 protein entry:     S10AC_HUMAN(see all similar genes):
S100B    HRNR    S100A4    S100A9    S100A13    S100A5
S100Z    S100A11    S100A6    FLG2    S100A16    S100P
S100A2    FLG    S100A7L3    S100A1    S100A14    S100A10

S100A12 for paralogs           About GeneDecksing



(SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
About This Section

10/73 NCBI SNPs in S100A12 are shown (see all 73    About this table
Genomic DataTranscription Related DataAllele Frequencies
SNP IDValidClinical
significance
Chr 1 posSequence#AA
Chg
TypeMore#Allele
freq
PopTotal
sample
More
----------
rs1119973801,2
--153345745(+) GGAATG/ACAATA 1 -- ds50011Minor allele frequency- A:0.50CSA 2
rs30148821,2
C,F,A,--153345782(+) actacG/Agcctc 1 -- ds50017Minor allele frequency- A:0.32NA WA CSA 129
rs1441518671,2
--153345816(+) TCTCGA/CCCCAG 1 -- ds50010--------
rs1451410871,2
--153345849(+) GGCACA/GTGCCA 1 -- ds50010--------
rs29161911,2
C,F,A,--153345911(-) GAGAGA/GATAGA 1 -- ds50016Minor allele frequency- G:0.09NA WA CSA EA 248
rs22338671,2
--153345993(-) cactcA/TctcaA 1 -- ds50010--------
rs22338661,2
--153346065(-) ATTTGC/TTCATT 1 -- ds50010--------
rs22338651,2
F,--153346138(-) GTTCCC/TAAACT 1 -- ds50011Minor allele frequency- T:0.02WA 118
rs1816993011,2
--153346145(+) GAACCA/GCAGGC 1 -- ds50010--------
rs1859315411,2
--153346148(+) CCGCAA/GGCATG 1 -- ds50010--------

HapMap Linkage Disequilibrium report for S100A12 (153346184 - 153348125 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
      Database of Genomic Variants (DGV) variations for S100A12: --

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(in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
About This Section

S100A12 for disorders           About GeneDecksing

OMIM gene information: 603112    OMIM disorders: --

20/44 diseases for S100A12 (see all 44):    About MalaCards
mooren's ulcer    cluster headache    inflammatory bowel disease    irritable bowel syndrome
juvenile rheumatoid arthritis    rheumatoid arthritis    funisitis    chorioamnionitis
kawasaki disease    reactive arthritis    headache    dysautonomia
psoriatic arthritis    onchocerciasis    arthritis    ulcerative colitis
hirschsprung's disease    cystic fibrosis    diabetes mellitus    keratitis

3 diseases from the University of Copenhagen DISEASES database for S100A12:
Mooren's ulcer     Kawasaki disease     Inflammatory bowel disease

10/17 Novoseek disease relationships for S100A12 gene (see all 17)    About this table

Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
moorens ulcer 83.6 3 9746433 (1), 9440166 (1), 10219252 (1)
kawasaki disease 59.3 8 15374807 (2), 12699958 (2), 15838637 (1), 17140160 (1)
inflammation 55.6 32 17675327 (3), 17208591 (2), 18164192 (2), 20437698 (2) (see all 22)
rheumatoid arthritis 44.5 4 19284577 (1), 20100792 (1), 17223658 (1), 17140160 (1)
arthritis 39.9 10 20437698 (3), 12832707 (1), 12617572 (1), 19035478 (1) (see all 6)
hypersensitivity contact 34.9 1 8902647 (1)
sepsis neonatal 34.6 1 19395960 (1)
inflammatory bowel diseases 34.5 8 18050298 (2), 12740341 (2), 17675327 (2), 16259736 (1)
psoriasis 33.8 3 10844569 (1), 15099362 (1)
chorioamnionitis 30.6 1 18238979 (2), 19395960 (1)

Human Genome Epidemiology (HuGE) Navigator: S100A12 (2 documents)

Export disorders for S100A12 gene to outside databases

(in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
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PubMed articles for S100A12 gene, integrated from 9 sources (see all 164):
(articles sorted by number of sources associating them with S100A12)
    Utopia: connect your pdf to the dynamic
world of online information

  1. Characterization of the human S100A12 (calgranulin C, p6, CAAF1, CGRP) gene, a new member of the S100 gene cluster on chromosome 1q21. (PubMed id 8985590)1, 2, 3, 9 Wicki R.... Heizmann C.W. (1996)
  2. Amino acid sequence determination of human S100A12 (P6, calgranulin C, CGRP, CAAF1) by tandem mass spectrometry. (PubMed id 8769108)1, 2, 9 Ilg E.C.... Heizmann C.W. (1996)
  3. Olopatadine suppresses the migration of THP-1 monocytes induced by S100A12 protein. (PubMed id 16864903)1, 7, 9 Kishimoto K....Hasegawa K. (2006)
  4. Both Ca2+ and Zn2+ are essential for S100A12 protein oligomerization and function. (PubMed id 19386136)1, 2, 9 Moroz O.V....Bronstein I.B. (2009)
  5. The three-dimensional structure of human S100A12. (PubMed id 11134923)1, 2, 9 Moroz O.V.... Bronstein I.B. (2001)
  6. Calcitermin, a novel antimicrobial peptide isolated from human airway secretions. (PubMed id 11522286)1, 2, 9 Cole A.M.... Ganz T. (2001)
  7. Host-parasite interaction in human onchocerciasis: identification and sequence analysis of a novel human calgranulin. (PubMed id 8619876)1, 2, 9 Marti T.... Gallin M.Y. (1996)
  8. Identification and characterization of a novel human neutrophil protein related to the S100 family. (PubMed id 7626002)1, 2, 9 Guignard F.... Markert M. (1995)
  9. CacyBP/SIP, a calcyclin and Siah-1-interacting protein, binds EF-hand proteins of the S100 family. (PubMed id 12042313)1, 2, 9 Filipek A....Kuznicki J. (2002)
  10. The crystal structures of human S100A12 in apo form a nd in complex with zinc: new insights into S100A12 oligomerisation. (PubMed id 19501594)1, 2 Moroz O.V....Bronstein I.B. (2009)

(in PubMed, OMIM, and NCBI Bookshelf)
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(According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
About This Section
Entrez Gene: 6283 HGNC: 10489 AceView: S100A12 Ensembl:ENSG00000163221 euGenes: HUgn6283
ECgene: S100A12 H-InvDB: S100A12

(According to HUGE)
About This Section
  --

(According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section
NameDescription
PharmGKB entry for S100A12 Pharmacogenomics, SNPs, Pathways

(Patent information from GeneIP,
Licensable technologies from WIS Yeda, Salk, Tufts,
IP news from LifeMap Sciences, Inc.)
About This Section
Patent Information for S100A12 gene:
Search GeneIP for patents involving S100A12

GeneCards and IP:
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