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Aliases for RYKP1 Gene

Aliases for RYKP1 Gene

  • Receptor-Like Tyrosine Kinase Pseudogene 1 2 3 5
  • RYK Receptor-Like Tyrosine Kinase Pseudogene 1 2 3
  • RYK Receptor-Like Tyrosine Kinase-Like 1 2 3
  • JTK5B Protein Tyrosine Kinase 2 3
  • RYK Receptor-Like Tyrosine Kinase Pseudogene 2
  • JTK5B 3
  • RYKL1 3
  • JTK5 3
  • RYKP 3

External Ids for RYKP1 Gene

Previous HGNC Symbols for RYKP1 Gene

  • RYKL1
  • JTK5B
  • RYKP

Previous GeneCards Identifiers for RYKP1 Gene

  • GC17P004125

Summaries for RYKP1 Gene

GeneCards Summary for RYKP1 Gene

RYKP1 (Receptor-Like Tyrosine Kinase Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RYKP1 Gene

Genomics for RYKP1 Gene

Regulatory Elements for RYKP1 Gene

Enhancers for RYKP1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17G004219 1.1 ENCODE dbSUPER 0.7 -1.3 -1257 1.7 FOXA2 ZNF76 RARA ZNF366 ZSCAN5C CEBPB NR2F2 NFIC PRDM6 CEBPA SHPK ANKFY1 CYB5D2 RYKP1 LOC100420060
GH17G004215 1.4 Ensembl ENCODE dbSUPER 0.4 -6.3 -6270 1.4 CBX3 INSM2 SIN3A KLF17 DEAF1 FEZF1 ZNF2 ZSCAN9 RAD21 RFX5 ANKFY1 CYB5D2 RYKP1 LOC100420060
GH17G004228 1.3 Ensembl ENCODE dbSUPER 0.4 +8.0 7958 2.9 TBP JUN INSM2 SIN3A FEZF1 ZEB1 RFX5 ZNF366 ZBTB48 ZSCAN5C LOC100130950 ANKFY1 CYB5D2 RYKP1
GH17G004222 0.7 FANTOM5 dbSUPER 0.7 +0.3 290 0.3 HNF4G HNF4A CYB5D2 RYKP1 ANKFY1
GH17G004203 1.1 FANTOM5 ENCODE dbSUPER 0.4 -17.1 -17108 2.2 JUND BHLHE40 SIN3A FOS PRDM10 MAFK ZZEF1 CYB5D2 ANKFY1 LOC100420060 RYKP1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RYKP1 on UCSC Golden Path with GeneCards custom track

Genomic Location for RYKP1 Gene

Chromosome:
17
Start:
4,222,066 bp from pter
End:
4,225,054 bp from pter
Size:
2,989 bases
Orientation:
Plus strand

Genomic View for RYKP1 Gene

Genes around RYKP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RYKP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RYKP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RYKP1 Gene

Proteins for RYKP1 Gene

Post-translational modifications for RYKP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RYKP1 Gene

Domains & Families for RYKP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RYKP1 Gene

Function for RYKP1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RYKP1 Gene

Localization for RYKP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RYKP1 Gene

Pathways & Interactions for RYKP1 Gene

SuperPathways for RYKP1 Gene

No Data Available

Interacting Proteins for RYKP1 Gene

Gene Ontology (GO) - Biological Process for RYKP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RYKP1 Gene

Drugs & Compounds for RYKP1 Gene

No Compound Related Data Available

Transcripts for RYKP1 Gene

mRNA/cDNA for RYKP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RYKP1 Gene

No ASD Table

Relevant External Links for RYKP1 Gene

GeneLoc Exon Structure for
RYKP1
ECgene alternative splicing isoforms for
RYKP1

Expression for RYKP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RYKP1 Gene

NURSA nuclear receptor signaling pathways regulating expression of RYKP1 Gene:

RYKP1
genes like me logo Genes that share expression patterns with RYKP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RYKP1 Gene

Orthologs for RYKP1 Gene

Evolution for RYKP1 Gene

ENSEMBL:
Gene Tree for RYKP1 (if available)
TreeFam:
Gene Tree for RYKP1 (if available)

No data available for Orthologs for RYKP1 Gene

Paralogs for RYKP1 Gene

No data available for Paralogs for RYKP1 Gene

Variants for RYKP1 Gene

Relevant External Links for RYKP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RYKP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RYKP1 Gene

Disorders for RYKP1 Gene

No disorders were found for RYKP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RYKP1 Gene

Publications for RYKP1 Gene

  1. Genomic structure and expression of the mouse growth factor receptor related to tyrosine kinases (Ryk). (PMID: 10066802) Halford M.M. … Stacker S.A. (J. Biol. Chem. 1999) 2 3 64
  2. Molecular cloning and chromosomal localisation of the human homologue of a receptor related to tyrosine kinases (RYK). (PMID: 8386829) Stacker S.A. … Wilks A.F. (Oncogene 1993) 2 3 64
  3. A survey of protein tyrosine kinase mRNAs expressed in normal human melanocytes. (PMID: 8247543) Lee S.-T. … Spritz R.A. (Oncogene 1993) 3 64
  4. Putative tyrosine kinases expressed in K-562 human leukemia cells. (PMID: 2247464) Partanen J. … Alitalo K. (Proc. Natl. Acad. Sci. U.S.A. 1990) 3 64

Products for RYKP1 Gene

Sources for RYKP1 Gene

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