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Aliases for RXFP4 Gene

Aliases for RXFP4 Gene

  • Relaxin/Insulin-Like Family Peptide Receptor 4 2 3
  • Relaxin Family Peptide Receptor 4 2 3 4
  • Insulin-Like Peptide INSL5 Receptor 3 4
  • G-Protein Coupled Receptor GPCR142 3 4
  • G Protein-Coupled Receptor 100 2 3
  • G-Protein Coupled Receptor 100 3 4
  • Relaxin 3 Receptor 2 2 3
  • RLN3 Receptor 2 3 4
  • GPR100 3 4
  • RLN3R2 3 4
  • Relaxin-3 Receptor 2 3
  • GPCR142 3
  • RXFPR4 3

External Ids for RXFP4 Gene

Previous HGNC Symbols for RXFP4 Gene

  • GPR100
  • RLN3R2

Previous GeneCards Identifiers for RXFP4 Gene

  • GC01P154178
  • GC01P127272

Summaries for RXFP4 Gene

Entrez Gene Summary for RXFP4 Gene

  • GPR100 is a member of the rhodopsin family of G protein-coupled receptors (GPRs) (Fredriksson et al., 2003 [PubMed 14623098]).[supplied by OMIM, Mar 2008]

GeneCards Summary for RXFP4 Gene

RXFP4 (Relaxin/Insulin-Like Family Peptide Receptor 4) is a Protein Coding gene. Among its related pathways are Signaling by GPCR and Signaling by GPCR. GO annotations related to this gene include angiotensin type II receptor activity. An important paralog of this gene is ACKR3.

UniProtKB/Swiss-Prot for RXFP4 Gene

  • High affinity receptor for INSL5. Also acts as receptor for RLN3/relaxin-3, as well as bradykinin and kallidin. Binding of the ligand inhibit cAMP accumulation.

Gene Wiki entry for RXFP4 Gene

No data available for Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RXFP4 Gene

Genomics for RXFP4 Gene

Regulatory Elements for RXFP4 Gene

Genomic Location for RXFP4 Gene

Start:
155,941,689 bp from pter
End:
155,942,949 bp from pter
Size:
1,261 bases
Orientation:
Plus strand

Genomic View for RXFP4 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for RXFP4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RXFP4 Gene

Proteins for RXFP4 Gene

  • Protein details for RXFP4 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8TDU9-RL3R2_HUMAN
    Recommended name:
    Relaxin-3 receptor 2
    Protein Accession:
    Q8TDU9
    Secondary Accessions:
    • B0M0L4
    • Q3MJB1
    • Q8NGZ8

    Protein attributes for RXFP4 Gene

    Size:
    374 amino acids
    Molecular mass:
    41141 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=BAC05844.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};

neXtProt entry for RXFP4 Gene

Proteomics data for RXFP4 Gene at MOPED

Post-translational modifications for RXFP4 Gene

  • Glycosylation at Asn5 and Asn17
  • Modification sites at PhosphoSitePlus

Other Protein References for RXFP4 Gene

ENSEMBL proteins:
Reactome Protein details:
REFSEQ proteins:

No data available for DME Specific Peptides for RXFP4 Gene

Domains for RXFP4 Gene

Gene Families for RXFP4 Gene

HGNC:
  • RXFP :GPCR / Class A : Relaxin family peptide receptors
IUPHAR :

Protein Domains for RXFP4 Gene

Suggested Antigen Peptide Sequences for RXFP4 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q8TDU9

UniProtKB/Swiss-Prot:

RL3R2_HUMAN :
  • Q8TDU9
Family:
  • Belongs to the G-protein coupled receptor 1 family.
genes like me logo Genes that share domains with RXFP4: view

Function for RXFP4 Gene

Molecular function for RXFP4 Gene

UniProtKB/Swiss-Prot Function: High affinity receptor for INSL5. Also acts as receptor for RLN3/relaxin-3, as well as bradykinin and kallidin. Binding of the ligand inhibit cAMP accumulation.

Gene Ontology (GO) - Molecular Function for RXFP4 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004930 G-protein coupled receptor activity --
GO:0004945 angiotensin type II receptor activity IEA --
GO:0005515 protein binding IPI 24802387
genes like me logo Genes that share ontologies with RXFP4: view

Phenotypes for RXFP4 Gene

GenomeRNAi human phenotypes for RXFP4:
genes like me logo Genes that share phenotypes with RXFP4: view

Animal Model Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for RXFP4

In Situ Assay Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for RXFP4 Gene

Localization for RXFP4 Gene

Subcellular locations from UniProtKB/Swiss-Prot for RXFP4 Gene

Cell membrane; Multi-pass membrane protein.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for RXFP4 Gene COMPARTMENTS Subcellular localization image for RXFP4 gene
Compartment Confidence
plasma membrane 5

Gene Ontology (GO) - Cellular Components for RXFP4 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005886 plasma membrane TAS --
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with RXFP4: view

Pathways for RXFP4 Gene

genes like me logo Genes that share pathways with RXFP4: view

PCR Array Products

  • Pathway & Disease-focused RT² Profiler PCR Arrays
    • G Protein Coupled Receptors 384HT in human,mouse,rat

Gene Ontology (GO) - Biological Process for RXFP4 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007186 G-protein coupled receptor signaling pathway --
GO:0038166 angiotensin-activated signaling pathway IEA --
genes like me logo Genes that share ontologies with RXFP4: view

Compounds for RXFP4 Gene

(2) HMDB Compounds for RXFP4 Gene

Compound Synonyms Cas Number PubMed IDs
Bradykinin
  • Callidin I
58-82-2
Cyclic AMP
  • Cyclic AMP
60-92-4

(7) IUPHAR Ligand for RXFP4 Gene

Ligand Type Action Affinity Pubmed IDs
[125I]H3 relaxin Agonist Full agonist 9.7
[125I]H3-B/INSL5 A chimera Agonist Agonist 8.9
INSL5 Agonist Full agonist 8.8
R3(BDelta23-27)R/I5 chimeric peptide Antagonist Antagonist 8.64
[125I]INSL5 (human) Agonist Full agonist 8.6
europium-labelled INSL5 None None 8.3
H3 relaxin Agonist Full agonist 7

(2) Novoseek inferred chemical compound relationships for RXFP4 Gene

Compound -log(P) Hits PubMed IDs
adenylate 23.4 2
calcium 0 2
genes like me logo Genes that share compounds with RXFP4: view

Transcripts for RXFP4 Gene

mRNA/cDNA for RXFP4 Gene

(6) Additional mRNA sequences :
(5) Selected AceView cDNA sequences:
(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for RXFP4 Gene

Relaxin/insulin-like family peptide receptor 4:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for RXFP4

Primer Products

  • OriGene qSTAR qPCR primer pairs in human,mouse,rat for RXFP4
  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for RXFP4 Gene

No ASD Table

Relevant External Links for RXFP4 Gene

GeneLoc Exon Structure for
RXFP4
ECgene alternative splicing isoforms for
RXFP4

Expression for RXFP4 Gene

mRNA expression in normal human tissues for RXFP4 Gene

mRNA differential expression in normal tissues according to GTEx for RXFP4 Gene

This gene is overexpressed in Colon - Transverse (21.9) and Small Intestine - Terminal Ileum (6.0).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for RXFP4 Gene

SOURCE GeneReport for Unigene cluster for RXFP4 Gene Hs.449914

mRNA Expression by UniProt/SwissProt for RXFP4 Gene

Q8TDU9-RL3R2_HUMAN
Tissue specificity: Expressed in a broader range of tissues including brain, kidney, testis, thymus, placenta, prostate, salivary gland, thyroid and colon.
genes like me logo Genes that share expressions with RXFP4: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery for RXFP4 Gene

Orthologs for RXFP4 Gene

This gene was present in the common ancestor of chordates.

Orthologs for RXFP4 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia RXFP4 35
  • 99.64 (n)
  • 99.2 (a)
RXFP4 36
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia RXFP4 35
  • 86.86 (n)
  • 85.79 (a)
RXFP4 36
  • 77 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Rxfp4 35
  • 80.18 (n)
  • 76.76 (a)
Rxfp4 16
Rxfp4 36
  • 69 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia RXFP4 36
  • 64 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia LOC100486614 35
  • 56.08 (n)
  • 47.8 (a)
zebrafish
(Danio rerio)
Actinopterygii RXFP4 36
  • 43 (a)
OneToMany
sea squirt
(Ciona savignyi)
Ascidiacea CSA.8 36
  • 15 (a)
OneToMany
Species with no ortholog for RXFP4:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for RXFP4 Gene

ENSEMBL:
Gene Tree for RXFP4 (if available)
TreeFam:
Gene Tree for RXFP4 (if available)

Paralogs for RXFP4 Gene

Paralogs for RXFP4 Gene

Selected SIMAP similar genes for RXFP4 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with RXFP4: view

Variants for RXFP4 Gene

Sequence variations from dbSNP and Humsavar for RXFP4 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
rs1018730 -- 155,941,039(-) GAGAA(C/T)ACATG upstream-variant-2KB
rs2152051 - 155,942,695(-) GCCTC(A/G)ACCGC missense, reference
rs6659649 -- 155,939,778(+) aaaaa(A/T)ttttt upstream-variant-2KB
rs6678443 -- 155,942,654(+) CGGGA(A/G)CCCCG synonymous-codon, reference
rs11300675 -- 155,939,778(+) AAAAA(-/T)TTTTT upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for RXFP4 Gene

Variant ID Type Subtype PubMed ID
esv33869 CNV Loss 17666407
nsv509513 CNV Insertion 20534489

Relevant External Links for RXFP4 Gene

HapMap Linkage Disequilibrium report
RXFP4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for RXFP4 Gene

Disorders for RXFP4 Gene

No disorders were found for RXFP4 Gene.

No data available for UniProtKB/Swiss-Prot for RXFP4 Gene

Publications for RXFP4 Gene

  1. Receptors for relaxin family peptides. (PMID: 15956688) Bathgate R.A. … Summers R.J. (Ann. N. Y. Acad. Sci. 2005) 2 3 23
  2. Identification of relaxin-3/INSL7 as a ligand for GPCR142. (PMID: 14522967) Liu C. … Lovenberg T.W. (J. Biol. Chem. 2003) 3 4 23
  3. Identification and characterisation of GPR100 as a novel human G- protein-coupled bradykinin receptor. (PMID: 14530218) Boels K. … Schaller H.C. (Br. J. Pharmacol. 2003) 3 4 23
  4. INSL5 is a high affinity specific agonist for GPCR142 (GPR100). (PMID: 15525639) Liu C. … Lovenberg T.W. (J. Biol. Chem. 2005) 3 4 23
  5. Identification of G protein-coupled receptor genes from the human genome sequence. (PMID: 12044878) Takeda S. … Mitaku S. (FEBS Lett. 2002) 3 4

Products for RXFP4 Gene

  • Pathway & Disease-focused RT² Profiler PCR Arrays
    • G Protein Coupled Receptors 384HT in human,mouse,rat
  • QIAGEN qRT-PCR Assays for microRNAs that regulate RXFP4
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for RXFP4
    • Block miRNA regulation of RXFP4 using miScript Target Protectors

    Sources for RXFP4 Gene

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