RUSC1-AS1 Gene
RNA gene GIFtS: 29
GCID: GC01M155287
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RUSC1 antisense RNA 1(Previous names: chromosome 1 open reading frame 104, RUSC1 antisense RNA...)
(Previous symbol: C1orf104)
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Aliases
for RUSC1-AS1 gene
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc,
7Ensembl,
8DME,
9miRBase,
and/or 10fRNAdb)
About This Section
|
Subcategory (RNA class): non-coding RNA
Quality score for this RNA gene is 3
| Aliases |
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| RUSC1 Antisense RNA 11 2 3 | | FLJ359761 | | C1orf1041 2 3 | | Chromosome 1 Open Reading Frame 1041 | | RUSC1 Antisense RNA 1 (Non-Protein Coding)1 2 | | RP11-21N7.32 | | RUSC1 Antisense Gene Protein 12 3 | | Putative Uncharacterized Protein RUSC1-AS12 |
Export aliases for RUSC1-AS1 gene to outside databases |
Summaries
for RUSC1-AS1 gene(According to Entrez Gene,
Tocris Bioscience,
Wikipedia's
Gene Wiki,
PharmGKB,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
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Genomic Views
for RUSC1-AS1 gene
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69),
Regulatory elements and Epigenetics data according to
QIAGEN,
SABiosciences, and/or
SwitchGear Genomics)
About This Section
| RefSeq DNA sequence:- NC_000001.10 NC_018912.1 NT_004487.19
Regulatory elements:
 Search SABiosciences Regulatory transcription factor binding sites for RUSC1-AS1
Other transcription factors
Search SABiosciences Chromatin IP Primers for RUSC1-AS1
Epigenetics:
| | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat RUSC1-AS1 |
Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track
Entrez Gene cytogenetic band: 1q22 Ensembl cytogenetic band: 1q22 HGNC cytogenetic band: 1q22RUSC1-AS1 Gene in genomic location: bands according to Ensembl, locations according to
 (and/or Entrez Gene and/or Ensembl if different)
GeneLoc information about chromosome 1 GeneLoc Exon Structure GeneLoc location for GC01M155287: view genomic region
(about GC identifiers)
Start:
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155,286,654 bp from pter |
End:
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155,293,967 bp from pter |
Size:
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7,314 bases |
Orientation:
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minus strand |
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Proteins
for RUSC1-AS1 gene
(According to
1UniProtKB,
HORDE,
neXtProt,
Ensembl,
and/or Reactome,
Modification sites according to 2PhosphoSitePlus,
Specific Peptides from DME,
Protein expression images according to data from SPIRE MOPED and PaxDb,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from
EMD Millipore,
R&D Systems,
GenScript,
Enzo Life Sciences,
OriGene,
Novus Biologicals,
Sino Biological,
ProSpec, and/or
Uscn,
Biochemical Assays by
EMD Millipore,
R&D Systems,
OriGene,
GenScript,
Cell Signaling Technology,
Enzo Life Sciences, and/or
Uscn,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene,
Antibodies by
EMD Millipore,
R&D Systems,
GenScript,
Cell Signaling Technology,
OriGene,
Novus Biologicals,
Thermo Fisher Scientific,
Abcam, and/or
Uscn)
About This Section
|
UniProtKB/Swiss-Prot: RUAS1_HUMAN, Q66K80 (See
protein sequence)Recommended Name: Putative uncharacterized protein RUSC1-AS1 Size: 236 amino acids; 24494 Da
Caution: Product of a dubious CDS prediction
Secondary accessions: Q8NA07Alternative splicing: 2 isoforms: Q66K80-1 Q66K80-2 (No experimental confirmation available)Explore the universe of human proteins at neXtProt for RUSC1-AS1: NX_Q66K80
RUSC1-AS1 Protein expression data from MOPED and PaxDb: About this image 
REFSEQ proteins: NP_001034606.1
Human Recombinant Protein Products:
RUSC1-AS1 Antibody Products:
Assay Products for RUSC1-AS1: |
Protein
Domains /
Families
for RUSC1-AS1 gene(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| ProtoNet protein and cluster: Q66K80 |
Function
for RUSC1-AS1 gene
(According to 1UniProtKB,
Genatlas,
LifeMap Discovery™,
IUBMB, and/or
2DME,
Human phenotypes from GenomeRNAi,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene,
RNAi from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
microRNA from QIAGEN,
Gene Editing from DNA2.0,
Clones from EMD Millipore,
OriGene,
SwitchGear Genomics,
GenScript,
Sino Biological,
DNA2.0,
and Vector BioLabs,
Cell Lines from GenScript,
LifeMap BioReagents,
In Situ Hybridization Assays from Advanced Cell Diagnostics,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene.)
About This Section
|
Clone
Products: |  | Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore | |  | OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for RUSC1-AS1
OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for RUSC1-AS1
OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling 
| |  | GenScript Custom all cDNA clones Services for RUSC1-AS1 | |  | Browse Sino Biological Human cDNA Clones | |  | DNA2.0 Custom Codon Optimized Gene
Synthesis Service for RUSC1-AS1 | |  | Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat RUSC1-AS1 |
In Situ Assay
Products: |
 | Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for RUSC1-AS1 |
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Pathways & Interactions
for RUSC1-AS1 gene
(Pathways according to
EMD Millipore,
R&D Systems,
Cell Signaling Technology,
KEGG,
PharmGKB,
BioSystems,
Reactome,
Tocris Bioscience,
GeneGo (Thomson Reuters),
QIAGEN,
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Interaction Networks according to
SABiosciences,
and/or STRING,
Interactions according to 1UniProtKB,
2MINT,
3I2D, and/or
4STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene).
About This Section
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Interactions:
Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for RUSC1-AS1
|
Drugs & Compounds
for RUSC1-AS1 gene(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
EMD Millipore, Tocris Bioscience
HMDB,
BitterDB, and/or
Novoseek, and Drugs according to
DrugBank,
Enzo Life Sciences, and/or
PharmGKB, with drugs/clinical trials/news
search links to CenterWatch)
About This Section
|
 Browse Tocris compounds for RUSC1-AS1
Search CenterWatch for drugs/clinical trials and news about RUSC1-AS1
|
Transcripts
for RUSC1-AS1 gene(Secondary structures according to
fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
transcript ids from Ensembl
with links to UCSC,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
shRNA from
OriGene,
microRNA from QIAGEN,
Tagged/untagged cDNA clones from
OriGene,
SwitchGear Genomics,
GenScript,
DNA2.0,
Vector BioLabs,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN
)
About This Section
|
REFSEQ mRNAs for RUSC1-AS1 gene (2 alternative transcripts): NM_001039517.1 NM_173639.1 Unigene Clusters for RUSC1-AS1: RUSC1 antisense RNA 1 Hs.650801 [show with all ESTs], Hs.732744 [show with all ESTs]Unigene Representative Sequences: BC062571, BC1316144 Ensembl transcripts including schematic representations, and UCSC links where relevant: ENST00000446880(uc001fkh.1) ENST00000443642 ENST00000450199(uc001fki.3)
ENST00000543656
Clone
Products: | | OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for RUSC1-AS1
OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for RUSC1-AS1
OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling
| | | GenScript Custom all cDNA clones Services for RUSC1-AS1 | | | DNA2.0 Custom Codon Optimized Gene
Synthesis Service for RUSC1-AS1 | | | Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat RUSC1-AS1 |
Primer
Products: | | OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for RUSC1-AS1
Browse OriGene validated miRNA SYBR primer pairs
| | | SABiosciences RT2 qPCR Primer Assay in human, mouse / rat RUSC1-AS1 | | | QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat RUSC1-AS1 | | | QIAGEN QuantiFast Probe-based Assays in human, mouse, rat RUSC1-AS1 |
Additional cDNA sequence: BC131614.1 16 DOTS entries: DT.92468004 DT.107215 DT.121365144 DT.40235399 DT.95133952 DT.100712134 DT.85104788 DT.95146706 DT.97862673 DT.100658403 DT.100700994 DT.100775644 DT.101985274 DT.121365093 DT.121365184 DT.92467985 24 AceView cDNA sequences: BQ669479 BQ014286 BU620779 CD106136 BC080538 AI909732 NM_173639 BI049474 BC062571 AK125510 AX748038 AK093295 BI758806 BX374949 BX112471 BG150989 AW375374 AV711145 AW375370 BG978520 AW975511 BE156917 AA650045 BI160357
GeneLoc Exon Structure
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Expression
for RUSC1-AS1 gene
(RNA expression data according to
H-InvDB,
NONCODE,
miRBase, and
RNAdb,
Expression images according to data from
BioGPS,
Illumina Human BodyMap, and
CGAP
SAGE,
Sets of similar genes according to GeneDecks,
in vivo and in vitro expression data from LifeMap Discovery™,
plus additional links to
Genevestigator, and/or
SOURCE, and/or
BioGPS, and/or
UniProtKB,
PCR Arrays from
SABiosciences,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN,
In Situ Hybridization Assays from Advanced Cell Diagnostics)
About This Section
| Expression evidence for RUSC1-AS1:none
RUSC1-AS1 expression in normal human tissues (normalized intensities)
See probesets specificity/sensitivity at GeneAnnot
About this imageBioGPS
CGAP TAG: GGCCGAGCCC
About this image
See RUSC1-AS1 Protein Expression from SPIRE MOPED and PaxDB
Genevestigator expression for RUSC1-AS1
SOURCE GeneReport for Unigene clusters: Hs.650801 Hs.732744
SABiosciences Custom PCR Arrays for RUSC1-AS1
Primer
Products: | | OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for RUSC1-AS1
Browse OriGene validated miRNA SYBR primer pairs
| | | SABiosciences RT2 qPCR Primer Assay in human, mouse / rat RUSC1-AS1 | | | QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat RUSC1-AS1 | | | QIAGEN QuantiFast Probe-based Assays in human, mouse, rat RUSC1-AS1 | In Situ
Assay Products: |
| Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for RUSC1-AS1 |
Orthologs
for RUSC1-AS1 gene
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
,
5MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase,
and/or
6Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam)
About This Section
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ENSEMBL Gene Tree for RUSC1-AS1 (if available)
TreeFam Gene Tree for RUSC1-AS1 (if available) |
Paralogs
for RUSC1-AS1 gene(Paralogs according to
1HomoloGene,
2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
About This Section
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Genomic Variants
for RUSC1-AS1 gene(SNPs/Variants according to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE,
UniProtKB, and
DNA2.0,
Linkage Disequilibrium by HapMap,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB), Blood group antigen gene mutations by BGMUT,
Resequencing Primers from QIAGEN,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
About This Section
| | SABiosciences Cancer Mutation PCR Assays |
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Disorders
/ Diseases
for RUSC1-AS1 gene
(in which this Gene is Involved, According to MalaCards,
OMIM, UniProtKB,
the University of Copenhagen DISEASES
database,
Genatlas, GeneTests,
GAD,
HuGE Navigator,
and/or TGDB.)
About This Section
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Publications
for RUSC1-AS1 gene (in
PubMed.
Associations of this gene to articles via
1Entrez Gene,
2UniProtKB/Swiss-Prot,
3HGNC,
4GAD,
5PharmGKB,
6HMDB,
7DrugBank,
8UniProtKB/TrEMBL,
9 Novoseek, and/or
10fRNAdb)
About This Section
|
PubMed articles for RUSC1-AS1 gene integrated from 9 sources:
(articles sorted by number of sources associating them with RUSC1-AS1) | |  | Utopia: connect your pdf to the dynamic
world of online information |
- Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1, 2, 3 Ota T.... Sugano S. (2004)
- The DNA sequence and biological annotation of human chromosome 1. (PubMed id 16710414)1, 2 Gregory S.G.... Bentley D.R. (2006)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
- Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932)1 Strausberg R.L....Marra M.A. (2002)
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External Searches for RUSC1-AS1 gene
(in PubMed,
OMIM, and NCBI Bookshelf)
About This Section
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Genome Databases showing RUSC1-AS1 gene
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
Kegg,
and/or
H-InvDB)
About This Section
|
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Other Databases showing RUSC1-AS1 gene
(According to HUGE)
About This Section
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Specialized Databases showing RUSC1-AS1 gene(According to PharmGKB,
ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section
|
| Name | Description |
| PharmGKB entry for RUSC1-AS1 | Pharmacogenomics, SNPs, Pathways |
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About This Section
| Patent Information for RUSC1-AS1 gene:
Search GeneIP for patents involving RUSC1-AS1
GeneCards and IP:
Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
|
Products
for RUSC1-AS1 gene(Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or
Enzo Life Sciences),
In Situ Hybridization Assays from
Advanced Cell Diagnostics
About This Section
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| | |  | Browse OriGene Antibodies | | OriGene shRNA RFP for RUSC1-AS1 | | | OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for RUSC1-AS1 | | OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for RUSC1-AS1 | | | OriGene Protein Over-expression Lysate for RUSC1-AS1 | | Browse OriGene Fluorogenic Cell Assay Kits | | | OriGene siRNA for RUSC1-AS1 | | Browse 3'-UTR reporter clones for miRNA target validation | | | OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for RUSC1-AS1 | | OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for RUSC1-AS1 | | | Browse OriGene GFP tagged cDNA clones in CMV expression vector | | Browse OriGene MicroRNA Expression Plasmids | | | Browse OriGene basic RS shRNAs | | Browse OriGene validated miRNA SYBR primer pairs | | | Browse OriGene full length recombinant human proteins expressed in human HEK293 cells | | OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling | | | OriGene Custom Antibody Services for RUSC1-AS1 | | OriGene Custom Protein Services for RUSC1-AS1 | | | OriGene Custom Immunoassay Development | | |
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| | | QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat RUSC1-AS1 | | | Search QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing RUSC1-AS1 | | | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat RUSC1-AS1 | | | QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat RUSC1-AS1 | | | QIAGEN QuantiFast Probe-based Assays in human, mouse, rat RUSC1-AS1 | | | QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat RUSC1-AS1 |
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 | | | | | | Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for RUSC1-AS1 |
|  |  |  | | | | | Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat RUSC1-AS1 |
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