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Aliases for RUSC1-AS1 Gene

Subcategory (RNA class) for RUSC1-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for RUSC1-AS1 Gene

  • RUSC1 Antisense RNA 1 2 3 4
  • RUSC1 Antisense RNA 1 (Non-Protein Coding) 2 3
  • RUSC1 Antisense Gene Protein 1 3 4
  • C1orf104 3 4
  • Putative Uncharacterized Protein RUSC1-AS1 3
  • Chromosome 1 Open Reading Frame 104 2

External Ids for RUSC1-AS1 Gene

ORGUL Members for RUSC1-AS1 Gene

Previous Symbols for RUSC1-AS1 Gene

  • C1orf104

Summaries for RUSC1-AS1 Gene

GeneCards Summary for RUSC1-AS1 Gene

RUSC1-AS1 (RUSC1 Antisense RNA 1) is a RNA Gene, and belongs to antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RUSC1-AS1 Gene

Genomics for RUSC1-AS1 Gene

Genomic Location for RUSC1-AS1 Gene

Start:
155,316,863 bp from pter
End:
155,324,176 bp from pter
Size:
7,314 bases
Orientation:
Minus strand

Genomic View for RUSC1-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for RUSC1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RUSC1-AS1 Gene

No data available for Regulatory Elements for RUSC1-AS1 Gene

Proteins for RUSC1-AS1 Gene

  • Protein details for RUSC1-AS1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q66K80-RUAS1_HUMAN
    Recommended name:
    Putative uncharacterized protein RUSC1-AS1
    Protein Accession:
    Q66K80
    Secondary Accessions:
    • Q8NA07

    Protein attributes for RUSC1-AS1 Gene

    Size:
    236 amino acids
    Molecular mass:
    24494 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for RUSC1-AS1 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for RUSC1-AS1 Gene

Proteomics data for RUSC1-AS1 Gene at MOPED

Post-translational modifications for RUSC1-AS1 Gene

No Post-translational modifications

Other Protein References for RUSC1-AS1 Gene

REFSEQ proteins:

No data available for DME Specific Peptides for RUSC1-AS1 Gene

Domains for RUSC1-AS1 Gene

Gene Families for RUSC1-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Protein Domains for RUSC1-AS1 Gene

ProtoNet:
genes like me logo Genes that share domains with RUSC1-AS1: view

No data available for UniProtKB/Swiss-Prot for RUSC1-AS1 Gene

Function for RUSC1-AS1 Gene

Gene Ontology (GO) - Molecular Function for RUSC1-AS1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 25416956
genes like me logo Genes that share ontologies with RUSC1-AS1: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for RUSC1-AS1 Gene

Localization for RUSC1-AS1 Gene

No data available for Gene Ontology (GO) - Cellular Components for RUSC1-AS1 Gene

Pathways for RUSC1-AS1 Gene

SuperPathways for RUSC1-AS1 Gene

No Data Available

Interacting Proteins for RUSC1-AS1 Gene

Selected Interacting proteins: Q66K80-RUAS1_HUMAN for RUSC1-AS1 Gene via UniProtKB

Symbol External ID(s) Details
PSMA3

Gene Ontology (GO) - Biological Process for RUSC1-AS1 Gene

None

No data available for Pathways by source for RUSC1-AS1 Gene

Transcripts for RUSC1-AS1 Gene

Unigene Clusters for RUSC1-AS1 Gene

RUSC1 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for RUSC1-AS1 Gene

No ASD Table

Relevant External Links for RUSC1-AS1 Gene

GeneLoc Exon Structure for
RUSC1-AS1
ECgene alternative splicing isoforms for
RUSC1-AS1

Expression for RUSC1-AS1 Gene

mRNA expression in normal human tissues for RUSC1-AS1 Gene

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for RUSC1-AS1 Gene

SOURCE GeneReport for Unigene cluster for RUSC1-AS1 Gene Hs.650801

genes like me logo Genes that share expressions with RUSC1-AS1: view

Orthologs for RUSC1-AS1 Gene

Evolution for RUSC1-AS1 Gene

ENSEMBL:
Gene Tree for RUSC1-AS1 (if available)
TreeFam:
Gene Tree for RUSC1-AS1 (if available)

No data available for Orthologs for RUSC1-AS1 Gene

Paralogs for RUSC1-AS1 Gene

Selected SIMAP similar genes for RUSC1-AS1 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with RUSC1-AS1: view

No data available for Paralogs for RUSC1-AS1 Gene

Variants for RUSC1-AS1 Gene

Sequence variations from dbSNP and Humsavar for RUSC1-AS1 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
VAR_050704 -

Structural Variations from Database of Genomic Variants (DGV) for RUSC1-AS1 Gene

Variant ID Type Subtype PubMed ID
dgv3n68 CNV Loss 17160897
dgv132e1 CNV Complex 17122850
nsv872457 CNV Loss 21882294
nsv831636 CNV Loss 17160897
esv33869 CNV Loss 17666407

Relevant External Links for RUSC1-AS1 Gene

HapMap Linkage Disequilibrium report
RUSC1-AS1

Disorders for RUSC1-AS1 Gene

No disorders were found for RUSC1-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for RUSC1-AS1 Gene

Publications for RUSC1-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 2 3 4
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  3. The DNA sequence and biological annotation of human chromosome 1. (PMID: 16710414) Gregory S.G. … Bentley D.R. (Nature 2006) 3 4
  4. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T. … Vidal M. (Cell 2014) 3
  5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for RUSC1-AS1 Gene

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat
  • QIAGEN qRT-PCR Assays for microRNAs that regulate RUSC1-AS1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for RUSC1-AS1
    • Block miRNA regulation of RUSC1-AS1 using miScript Target Protectors

    Sources for RUSC1-AS1 Gene

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