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Aliases for RUNDC1 Gene

Aliases for RUNDC1 Gene

  • RUN Domain Containing 1 2 3

External Ids for RUNDC1 Gene

Previous GeneCards Identifiers for RUNDC1 Gene

  • GC17P041506
  • GC17P038386
  • GC17P041132
  • GC17P036898

Summaries for RUNDC1 Gene

GeneCards Summary for RUNDC1 Gene

RUNDC1 (RUN Domain Containing 1) is a Protein Coding gene.

UniProtKB/Swiss-Prot for RUNDC1 Gene

  • May play a role as p53/TP53 inhibitor and thus may have oncogenic activity.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RUNDC1 Gene

Genomics for RUNDC1 Gene

Regulatory Elements for RUNDC1 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for RUNDC1 Gene

42,980,510 bp from pter
42,993,696 bp from pter
13,187 bases
Plus strand

Genomic View for RUNDC1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for RUNDC1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RUNDC1 Gene

Proteins for RUNDC1 Gene

  • Protein details for RUNDC1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    RUN domain-containing protein 1
    Protein Accession:
    Secondary Accessions:
    • Q6Y2K8
    • Q8IXT9
    • Q8N3W1

    Protein attributes for RUNDC1 Gene

    613 amino acids
    Molecular mass:
    67643 Da
    Quaternary structure:
    No Data Available
    • Sequence=AAH14873.1; Type=Erroneous initiation; Note=Translation N-terminally shortened.; Evidence={ECO:0000305}; Sequence=AAO86728.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305};

    Alternative splice isoforms for RUNDC1 Gene


neXtProt entry for RUNDC1 Gene

Proteomics data for RUNDC1 Gene at MOPED

Post-translational modifications for RUNDC1 Gene

  • Ubiquitination at Lys383 and Lys495
  • Modification sites at PhosphoSitePlus

Other Protein References for RUNDC1 Gene

ENSEMBL proteins:
REFSEQ proteins:

Antibody Products

No data available for DME Specific Peptides for RUNDC1 Gene

Domains for RUNDC1 Gene

Protein Domains for RUNDC1 Gene


Suggested Antigen Peptide Sequences for RUNDC1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry



  • Contains 1 RUN domain.
  • Contains 1 RUN domain.
genes like me logo Genes that share domains with RUNDC1: view

No data available for Gene Families for RUNDC1 Gene

Function for RUNDC1 Gene

Molecular function for RUNDC1 Gene

UniProtKB/Swiss-Prot Function:
May play a role as p53/TP53 inhibitor and thus may have oncogenic activity.
genes like me logo Genes that share phenotypes with RUNDC1: view

Animal Model Products

miRNA for RUNDC1 Gene

miRTarBase miRNAs that target RUNDC1

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for RUNDC1

In Situ Assay Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , Transcription Factor Targeting and HOMER Transcription for RUNDC1 Gene

Localization for RUNDC1 Gene

Subcellular locations from

Jensen Localization Image for RUNDC1 Gene COMPARTMENTS Subcellular localization image for RUNDC1 gene
Compartment Confidence
cytosol 2
nucleus 2
mitochondrion 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for RUNDC1 Gene

Pathways for RUNDC1 Gene

SuperPathways for RUNDC1 Gene

No Data Available

Interacting Proteins for RUNDC1 Gene

STRING Interaction Network Preview (showing 1 interactants - click image to see details)
Selected Interacting proteins: ENSP00000354622 for RUNDC1 Gene via STRING

Symbol External ID(s) Details

Gene Ontology (GO) - Biological Process for RUNDC1 Gene


No data available for Pathways by source for RUNDC1 Gene

Transcripts for RUNDC1 Gene

Unigene Clusters for RUNDC1 Gene

RUN domain containing 1:
Representative Sequences:

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for RUNDC1

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for RUNDC1 Gene

No ASD Table

Relevant External Links for RUNDC1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RUNDC1 Gene

mRNA expression in normal human tissues for RUNDC1 Gene

Protein differential expression in normal tissues for RUNDC1 Gene

This gene is overexpressed in Monocytes (56.8) and Islet of Langerhans (6.2).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for RUNDC1 Gene

SOURCE GeneReport for Unigene cluster for RUNDC1 Gene Hs.632255

genes like me logo Genes that share expressions with RUNDC1: view

Expression partners for RUNDC1 Gene

* - Elite partner

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for RUNDC1 Gene

Orthologs for RUNDC1 Gene

This gene was present in the common ancestor of animals.

Orthologs for RUNDC1 Gene

Organism Taxonomy Gene Similarity Type Details
(Bos Taurus)
Mammalia RUNDC1 35
  • 89.42 (n)
  • 93.02 (a)
  • 89 (a)
(Canis familiaris)
Mammalia RUNDC1 35
  • 90.76 (n)
  • 94.62 (a)
  • 90 (a)
(Mus musculus)
Mammalia Rundc1 35
  • 87.35 (n)
  • 90.35 (a)
Rundc1 16
Rundc1 36
  • 89 (a)
(Pan troglodytes)
Mammalia RUNDC1 35
  • 99.73 (n)
  • 99.84 (a)
  • 100 (a)
(Rattus norvegicus)
Mammalia Rundc1 35
  • 86.86 (n)
  • 91.18 (a)
(Monodelphis domestica)
Mammalia RUNDC1 36
  • 81 (a)
(Gallus gallus)
Aves RUNDC1 36
  • 75 (a)
(Anolis carolinensis)
Reptilia RUNDC1 36
  • 72 (a)
tropical clawed frog
(Silurana tropicalis)
Amphibia rundc1 35
  • 68.95 (n)
  • 68.47 (a)
African clawed frog
(Xenopus laevis)
Amphibia Xl.2440 35
(Danio rerio)
Actinopterygii LOC100537899 35
  • 67.28 (n)
  • 68.39 (a)
  • 63 (a)
rainbow trout
(Oncorhynchus mykiss)
Actinopterygii Omy.12801 35
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP004080 35
  • 47.9 (n)
  • 42.16 (a)
fruit fly
(Drosophila melanogaster)
Insecta CG3703 35
  • 48.97 (n)
  • 40.96 (a)
CG3703 36
  • 31 (a)
(Caenorhabditis elegans)
Secernentea T19D7.4 36
  • 25 (a)
sea squirt
(Ciona savignyi)
Ascidiacea CSA.2174 36
  • 29 (a)
Species with no ortholog for RUNDC1:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for RUNDC1 Gene

Gene Tree for RUNDC1 (if available)
Gene Tree for RUNDC1 (if available)

Paralogs for RUNDC1 Gene Pseudogenes for RUNDC1 Gene

genes like me logo Genes that share paralogs with RUNDC1: view

No data available for Paralogs for RUNDC1 Gene

Variants for RUNDC1 Gene

Sequence variations from dbSNP and Humsavar for RUNDC1 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type MAF
rs189786 -- 42,992,475(-) tctcc(A/G/T)gcctc utr-variant-3-prime, downstream-variant-500B
rs323496 -- 42,989,954(-) AGTAC(A/G)TCAAG intron-variant
rs323497 -- 42,989,882(-) TGAGG(C/T)AGGCG intron-variant
rs323498 -- 42,988,789(-) gttgc(C/T)caggc intron-variant
rs323499 -- 42,988,715(-) aggca(C/T)gagcc intron-variant

Structural Variations from Database of Genomic Variants (DGV) for RUNDC1 Gene

Variant ID Type Subtype PubMed ID
esv33998 OTHER Inversion 15654335
nsv483009 CNV Gain 15286789
nsv908258 CNV Loss 21882294
nsv457742 CNV Loss 19166990
esv2672913 CNV Deletion 23128226

Relevant External Links for RUNDC1 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for RUNDC1 Gene

Disorders for RUNDC1 Gene

No disorders were found for RUNDC1 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for RUNDC1 Gene

Publications for RUNDC1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  3. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A. … Carmell M.A. (Nature 2006) 3
  4. Global identification of modular cullin-RING ligase substrates. (PMID: 21963094) Emanuele M.J. … Elledge S.J. (Cell 2011) 3
  5. Methods for quantification of in vivo changes in protein ubiquitination following proteasome and deubiquitinase inhibition. (PMID: 22505724) Udeshi N.D. … Carr S.A. (Mol. Cell Proteomics 2012) 3

Products for RUNDC1 Gene

Sources for RUNDC1 Gene

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