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Aliases for RTP3 Gene

Aliases for RTP3 Gene

  • Receptor (Chemosensory) Transporter Protein 3 2 3 5
  • Transmembrane Protein 7 2 3 4
  • 3CxxC-Type Zinc Finger Protein 3 3 4
  • Receptor Transporter Protein 3 2 3
  • Z3CXXC3 3 4
  • TMEM7 3 4
  • Receptor Transporting Protein 3 3
  • Zinc Finger, 3CxxC-Type 3 3
  • 3CxxC-Type 3 2
  • Zinc Finger 2
  • LTM1 3

External Ids for RTP3 Gene

Previous HGNC Symbols for RTP3 Gene

  • TMEM7

Previous GeneCards Identifiers for RTP3 Gene

  • GC03P046515

Summaries for RTP3 Gene

GeneCards Summary for RTP3 Gene

RTP3 (Receptor (Chemosensory) Transporter Protein 3) is a Protein Coding gene. An important paralog of this gene is RTP1.

UniProtKB/Swiss-Prot for RTP3 Gene

  • Promotes functional cell surface expression of the bitter taste receptors TAS2R16 and TAS2R43.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RTP3 Gene

Genomics for RTP3 Gene

Regulatory Elements for RTP3 Gene

Enhancers for RTP3 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around RTP3 on UCSC Golden Path with GeneCards custom track

Genomic Location for RTP3 Gene

46,497,491 bp from pter
46,500,949 bp from pter
3,459 bases
Plus strand

Genomic View for RTP3 Gene

Genes around RTP3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RTP3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RTP3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RTP3 Gene

Proteins for RTP3 Gene

  • Protein details for RTP3 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Receptor-transporting protein 3
    Protein Accession:
    Secondary Accessions:
    • A2RRP6

    Protein attributes for RTP3 Gene

    232 amino acids
    Molecular mass:
    27031 Da
    Quaternary structure:
    • Interacts with TAS2R16.

neXtProt entry for RTP3 Gene

Proteomics data for RTP3 Gene at MOPED

Post-translational modifications for RTP3 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for RTP3 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for RTP3 Gene

Domains & Families for RTP3 Gene

Protein Domains for RTP3 Gene


Suggested Antigen Peptide Sequences for RTP3 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry



  • Belongs to the TMEM7 family.
  • Belongs to the TMEM7 family.
genes like me logo Genes that share domains with RTP3: view

Function for RTP3 Gene

Molecular function for RTP3 Gene

UniProtKB/Swiss-Prot Function:
Promotes functional cell surface expression of the bitter taste receptors TAS2R16 and TAS2R43.

Gene Ontology (GO) - Molecular Function for RTP3 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0031849 olfactory receptor binding IBA --
genes like me logo Genes that share ontologies with RTP3: view
genes like me logo Genes that share phenotypes with RTP3: view

Animal Model Products

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RTP3 Gene

Localization for RTP3 Gene

Subcellular locations from UniProtKB/Swiss-Prot for RTP3 Gene

Membrane; Single-pass type III membrane protein.

Subcellular locations from

Jensen Localization Image for RTP3 Gene COMPARTMENTS Subcellular localization image for RTP3 gene
Compartment Confidence
cytosol 2
golgi apparatus 1
mitochondrion 1
peroxisome 1
plasma membrane 1

No data available for Gene Ontology (GO) - Cellular Components for RTP3 Gene

Pathways & Interactions for RTP3 Gene

SuperPathways for RTP3 Gene

No Data Available

Interacting Proteins for RTP3 Gene

Gene Ontology (GO) - Biological Process for RTP3 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0001580 detection of chemical stimulus involved in sensory perception of bitter taste IDA 16720576
genes like me logo Genes that share ontologies with RTP3: view

No data available for Pathways by source and SIGNOR curated interactions for RTP3 Gene

Drugs & Compounds for RTP3 Gene

No Compound Related Data Available

Transcripts for RTP3 Gene

mRNA/cDNA for RTP3 Gene

(1) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(5) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for RTP3 Gene

Receptor (chemosensory) transporter protein 3:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for RTP3 Gene

No ASD Table

Relevant External Links for RTP3 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RTP3 Gene

mRNA expression in normal human tissues for RTP3 Gene

mRNA differential expression in normal tissues according to GTEx for RTP3 Gene

This gene is overexpressed in Liver (x45.6).

Protein differential expression in normal tissues from HIPED for RTP3 Gene

This gene is overexpressed in Liver (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for RTP3 Gene

SOURCE GeneReport for Unigene cluster for RTP3 Gene Hs.196584

mRNA Expression by UniProt/SwissProt for RTP3 Gene

Tissue specificity: Expressed predominantly in adult liver (PubMed:11896456, PubMed:17693185). Expressed in testis (PubMed:16720576, PubMed:17693185). Also expressed in kidney, lung and fetal liver (PubMed:17693185). Low levels in heart, thyroid, adrenal gland, pancreas, ovary, prostate, skin, plasma leukocytes, bone marrow and fetal brain (PubMed:17693185). Not detected in brain, spleen, colon, small intestine, skeletal muscle, stomach, placenta, salivary gland and uterus (PubMed:17693185).
genes like me logo Genes that share expression patterns with RTP3: view

Protein tissue co-expression partners for RTP3 Gene

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery for RTP3 Gene

Orthologs for RTP3 Gene

This gene was present in the common ancestor of chordates.

Orthologs for RTP3 Gene

Organism Taxonomy Gene Similarity Type Details
(Bos Taurus)
Mammalia RTP3 35
  • 82.82 (n)
  • 73.29 (a)
RTP3 36
  • 55 (a)
(Canis familiaris)
Mammalia RTP3 35
  • 80.57 (n)
  • 71.17 (a)
RTP3 36
  • 44 (a)
(Pan troglodytes)
Mammalia RTP3 35
  • 99.53 (n)
  • 99.07 (a)
RTP3 36
  • 98 (a)
(Mus musculus)
Mammalia Rtp3 36
  • 24 (a)
tropical clawed frog
(Silurana tropicalis)
Amphibia LOC100496614 35
  • 53.12 (n)
  • 43.87 (a)
(Danio rerio)
Actinopterygii si:ch211-276k2.2 35
  • 47.58 (n)
  • 37.68 (a)
Species with no ortholog for RTP3:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for RTP3 Gene

Gene Tree for RTP3 (if available)
Gene Tree for RTP3 (if available)

Paralogs for RTP3 Gene

Paralogs for RTP3 Gene

(4) SIMAP similar genes for RTP3 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with RTP3: view

Variants for RTP3 Gene

Sequence variations from dbSNP and Humsavar for RTP3 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs2280407 -- 46,498,473(+) GTGGG(A/G)AGAGG intron-variant
rs867619 -- 46,496,260(+) GAAAC(C/G)CTTTT upstream-variant-2KB
rs867620 -- 46,496,359(+) AATGC(C/T)AAAGT upstream-variant-2KB
rs883738 -- 46,496,689(-) CAAGG(A/G)GACCC upstream-variant-2KB
rs883739 -- 46,496,528(-) gcaat(A/C)agata upstream-variant-2KB

Variation tolerance for RTP3 Gene

Residual Variation Intolerance Score: 38.1% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 0.23; 5.05% of all genes are more intolerant (likely to be disease-causing)

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Relevant External Links for RTP3 Gene

Disorders for RTP3 Gene

Relevant External Links for RTP3

Genetic Association Database (GAD)
Human Genome Epidemiology (HuGE) Navigator
Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for RTP3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RTP3 Gene

Publications for RTP3 Gene

  1. Members of RTP and REEP gene families influence functional bitter taste receptor expression. (PMID: 16720576) Behrens M. … Meyerhof W. (J. Biol. Chem. 2006) 2 3 4 67
  2. Genome-wide association study for femoral neck bone geometry. (PMID: 20175129) Zhao L.J. … Deng H.W. (J. Bone Miner. Res. 2010) 3 23
  3. Inherited ACTH insensitivity illuminates the mechanisms of ACTH action. (PMID: 16271481) Clark A.J. … Huebner A. (Trends Endocrinol. Metab. 2005) 2 3
  4. RTP family members induce functional expression of mammalian odorant receptors. (PMID: 15550249) Saito H. … Matsunami H. (Cell 2004) 2 3
  5. The transcriptional map of the common eliminated region 1 (C3CER1) in 3p21.3. (PMID: 11896456) Kiss H. … Dumanski J.P. (Eur. J. Hum. Genet. 2002) 3 23

Products for RTP3 Gene

Sources for RTP3 Gene