RTN4 Gene
protein-coding GIFtS : 66
GCID: GC02 M055199
reticulon 4
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Aliasesfor RTN4 gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases Reticulon 4 1 2 RTN4-A2 NOGO1 2 3 5 RTN4-B12 ASY1 2 RTN4-B22 NSP-CL1 2 RTN4-C2 KIAA08861 3 Foocen3 Neurite Outgrowth Inhibitor2 3 Human NogoA2 Neuroendocrine-Specific Protein C Homolog2 3 My043 Protein2 NSP2 3 Neurite Growth Inhibitor 2202 NI220/2502 Reticulon 52 NOGO-A2 Reticulon-41 NOGOC2 Foocen3 Nbla002712 RTN-X2 Nbla105452 Reticulon-53 Nogo-B2 Neuroendocrine-Specific Protein3 Nogo-C2 Nogo Protein3 RTN-X2
Export aliases for RTN4 gene to outside databases Previous GC identifers: GC02M055237 GC02M055386 GC02M055173 GC02M055110 GC02M054934
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Summariesfor RTN4 gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section Entrez Gene summary for RTN4 : This gene belongs to the family of reticulon encoding genes. Reticulons are associated with the endoplasmic reticulum, and are involved in neuroendocrine secretion or in membrane trafficking in neuroendocrine cells. The product of this gene is a potent neurite outgrowth inhibitor which may also help block the regeneration of the central nervous system in higher vertebrates. Alternatively spliced transcript variants derived both from differential splicing and differential promoter usage and encoding different isoforms have been identified. (provided by RefSeq, Jul 2008) UniProtKB/Swiss-Prot: RTN4_HUMAN, Q9NQC3 Function : Developmental neurite growth regulatory factor with a role as a negative regulator of axon-axon adhesion andgrowth, and as a facilitator of neurite branching. Regulates neurite fasciculation, branching and extension in the developing nervous system. Involved in down-regulation of growth, stabilization of wiring and restriction of plasticity in the adult CNS. Regulates the radial migration of cortical neurons via an RTN4R-LINGO1 containing receptor complex (By similarity). Isoform 2 reduces the anti-apoptotic activity of Bcl-xl and Bcl-2. This is likely consecutive to their change in subcellular location, from the mitochondria to the endoplasmic reticulum, after binding and sequestration. Isoform 2 and isoform 3 inhibit BACE1 activity and amyloid precursor protein processing Gene Wiki entry for RTN4 (Reticulon 4)
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Genomic Viewsfor RTN4 gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000002.11 NC_018913.1 NT_022184.15 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the RTN4 gene promoter: POU2F1 POU2F1a C/EBPalpha Other transcription factors Search SABiosciences Chromatin IP Primers for RTN4 Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat RTN4
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 2p16.3 Ensembl cytogenetic band: 2p16.1 HGNC cytogenetic band: 2p14-p13 RTN4 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 2 GeneLoc Exon Structure
GeneLoc location for GC02M055199: view genomic region
(about GC identifiers )
Start:
55,199,325 bp from pter
End:
55,339,757 bp from pter
Size:
140,433 bases
Orientation:
minus strand
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Proteinsfor RTN4 gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: RTN4_HUMAN, Q9NQC3 (See
protein sequence )Recommended Name: Reticulon-4 Size : 1192 amino acids; 129931 Da
Subunit : Binds to RTN4R. Interacts with Bcl-xl and Bcl-2. Isoform 2 binds to NGBR and RTN3. Isoform 2 and isoform 3interact with BACE1 and BACE2. Interacts with RTN4IP1. Interacts with ATL1
Subcellular location : Endoplasmic reticulum membrane; Multi-pass membrane protein. Note=Anchored to the membrane of theendoplasmic reticulum through 2 putative transmembrane domains
Sequence caution : Sequence=AAD39920.1; Type=Frameshift; Positions=1149, 1156; Sequence=AAG43160.1; Type=Erroneousinitiation; Note=Translation N-terminally extended; Sequence=AAG43160.1; Type=Frameshift; Positions=684, 700; Sequence=BAA74909.2; Type=Erroneous initiation; Note=Translation N-terminally shortened;
2 PDB 3D structures from and Proteopedia for RTN4 :2G31 (3D)
  2JV5 (3D)
 
Secondary accessions : O94962 Q7L7Q5 Q7L7Q6 Q7L7Q8 Q8IUA4 Q96B16 Q9BXG5 Q9H212 Q9H3I3 Q9UQ42 Q9Y293Q9Y2Y7 Q9Y5U6 Alternative splicing : 6 isoforms : Q9NQC3-1 Q9NQC3-2 Q9NQC3-3 Q9NQC3-4 Q9NQC3-5 Q9NQC3-6 Explore the universe of human proteins at neXtProt for RTN4: NX_Q9NQC3 Post-translational modifications:
View modification sites using PhosphoSitePlus 2 View neXtProt modification sites for NX_Q9NQC3 RTN4 Protein expression data from MOPED and PaxDb : About this image
REFSEQ proteins (5 alternative transcripts):
NP_008939.1 NP_065393.1 NP_722550.1 NP_997403.1 NP_997404.1 ENSEMBL proteins: ENSP00000378107 ENSP00000384471 ENSP00000349944 ENSP00000337838 ENSP00000322147 ENSP00000350365 ENSP00000378109 ENSP00000385650 ENSP00000397808 ENSP00000411628 ENSP00000384825 ENSP00000346465 Reactome Protein details: Q9NQC3 Human Recombinant Protein Products: Gene Ontology (GO): 5/10 cellular component terms (GO ID links to tree view) (see all 10 ): About this table
RTN4 for ontologies About GeneDecksing RTN4 Antibody Products: Assay Products for RTN4:
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Protein
Domains / Familiesfor RTN4 gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
RTN4 for domains About GeneDecksing 1 InterPro domain/family :
Graphical View of Domain Structure for InterPro Entry Q9NQC3 ProtoNet protein and cluster: Q9NQC3
1 Blocks protein family : IPB003388 Reticulon UniProtKB/Swiss-Prot: RTN4_HUMAN, Q9NQC3 Domain : Three regions, residues 59-172, 544-725 and the loop 66 amino acids, between the two transmembrane domains,known as Nogo-66 loop, appear to be responsible for the inhibitory effect on neurite outgrowth and the spreading of neurons. This Nogo-66 loop, mediates also the binding of RTN4 to its receptor (By similarity) Similarity : Contains 1 reticulon domain
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Functionfor RTN4 gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Function Summary: UniProtKB/Swiss-Prot: RTN4_HUMAN, Q9NQC3 Function : Developmental neurite growth regulatory factor with a role as a negative regulator of axon-axon adhesion andgrowth, and as a facilitator of neurite branching. Regulates neurite fasciculation, branching and extension in the developing nervous system. Involved in down-regulation of growth, stabilization of wiring and restriction of plasticity in the adult CNS. Regulates the radial migration of cortical neurons via an RTN4R-LINGO1 containing receptor complex (By similarity). Isoform 2 reduces the anti-apoptotic activity of Bcl-xl and Bcl-2. This is likely consecutive to their change in subcellular location, from the mitochondria to the endoplasmic reticulum, after binding and sequestration. Isoform 2 and isoform 3 inhibit BACE1 activity and amyloid precursor protein processing
Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for RTN4 (see all 12 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for RTN4 (see all 5 )OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector (see all 5 ): RTN4 (NM_020532 ) Browse Sino Biological Human cDNA Clones DNA2.0 Custom Codon Optimized Gene
Synthesis Service for RTN4 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat RTN4
In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for RTN4
Gene Ontology (GO): 2 molecular function terms (GO ID links to tree view) : About this table
RTN4 for ontologies About GeneDecksing Animal Models: Mouse knock-outs for RTN4: Rtn4 tm1Schw Rtn4 tm2.1Matl Rtn4 tm2Matl 4 MGI mutant phenotypes (inferred from 8 alleles ) (MGI details for Rtn4) :
RTN4 for phenotypes About GeneDecksing
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Pathways & Interactionsfor RTN4 gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Unified GeneCards pathways  - 5/7 super-pathways (see all 7 ) About this table See pathways by source Super-pathway contained gene-specific pathways 1 Axonal growth inhibition (RHOA activation) 2 Development MAG-dependent inhibition of neurite outgrowth 3 NgR-p75(NTR)-Mediated Signaling 4 p75(NTR)-mediated signaling 5 Cell death signalling via NRAGE, NRIF and NADE
Pathway sources See GeneCards unified pathways Show all pathways 1 EMD Millipore Pathway for RTN4 1 Downloadable PowerPoint Slide of QIAGEN Pathway Central Maps for RTN4 1 GeneGo (Thomson Reuters) Pathway for RTN4 1 BioSystems Pathway for RTN4 5
Reactome Pathways for RTN4
RTN4 for pathways About GeneDecksing Interactions: SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for RTN4 STRING Interaction
Network Preview (showing 5 interactants - click image to see 25)5/65 Interacting proteins for RTN4 (Q9NQC3 1 , 2 , 3 ENSP00000337838 4 ) via UniProtKB, MINT, STRING , and/or I2D (see all 65 )Interactant Interaction Details GeneCard External ID(s) COL4A3BP Q9Y5P4 2 , 3 , ENSP00000369862 4 MINT-68370 I2D:
score=5 STRING: ENSP00000369862 FXR2 P51116 2 , 3 , ENSP00000250113 4 MINT-67869 I2D:
score=5 STRING: ENSP00000250113 CRMP1 Q14194 2 , 3 , ENSP00000321606 4 MINT-65114 I2D:
score=4 STRING: ENSP00000321606 ABL1 P00519 2 , 3 , ENSP00000361423 4 MINT-8110731 I2D:
score=3 STRING: ENSP00000361423 FYN P06241 2 , 3 , ENSP00000357656 4 MINT-8111499 I2D:
score=3 STRING: ENSP00000357656
About this table Gene Ontology (GO): 5/28 biological process terms (GO ID links to tree view) (see all 28 ): About this table
RTN4 for ontologies About GeneDecksing
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Drugs & Compoundsfor RTN4 gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section
RTN4 for compounds About GeneDecksing Browse Tocris compounds for RTN4 1 Novoseek chemical compound relationship for RTN4 gene About this table
Compound
-log (P-Val)
Hits
PubMed IDs for Articles with Shared Sentences (# sentences)
ddvp
58
1
17029193 (1)
Search CenterWatch for drugs/clinical trials and news about RTN4
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Transcriptsfor RTN4 gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for RTN4 gene (5 alternative transcripts): NM_007008.2 NM_020532.4 NM_153828.2 NM_207520.1 NM_207521.1 Unigene Cluster for RTN4:
Reticulon 4 Hs.743996 [show with all ESTs ] Unigene Representative Sequence: NM_020532 16 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000394609 (uc002ryc.3 ) ENST00000405240 ENST00000357376 (uc002ryd.3 )ENST00000337526 (uc002rye.3 ) ENST00000317610 (uc002ryg.3 ) ENST00000357732 (uc002ryf.3 )ENST00000394611 ENST00000404909 ENST00000486085 ENST00000491592 ENST00000485749 ENST00000438462 ENST00000427710 ENST00000461004 ENST00000402434 ENST00000354474 Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for RTN4 (see all 12 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for RTN4 (see all 5 )OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector (see all 5 ): RTN4 (NM_020532 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for RTN4 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat RTN4
Additional cDNA sequence: AB015639.1 AB020693.1 AB040462.1 AB040463.1 AB073351.1 AB073359.1 AF063601.1 AF077050.1 AF087901.1 AF125103.1 AF132047.1 AF132048.1 AF148537.1 AF148538.1 AF177332.1 AF320999.1 AF333336.1 AJ251383.1 AJ251384.1 AJ251385.1 AK075039.1 AK098385.1 AK129806.1 AK130812.1 AK172726.1 AK302741.1 AY102276.1 AY102277.1 AY102278.1 AY102279.1 AY123245.1 AY123246.1 AY123247.1 AY123248.1 AY123249.1 AY123250.1 BC001035.2 BC007109.1 BC010737.1 BC012619.1 BC014366.1 BC016165.1 BC026788.1 BC068991.1 BC071848.1 BC150182.1 BC152425.1 BC152555.1 DQ778739.1
24/70 DOTS entries (see all 70 ): DT.87018236 DT.92057768
DT.91855184 DT.97862663 DT.100039375 DT.95148397 DT.100889622 DT.100039374 DT.97776594 DT.100889645 DT.100039372 DT.121021010 DT.100889631 DT.420660 DT.100889638 DT.100889649 DT.100889641 DT.100889621 DT.121021012 DT.408266 DT.95329023 DT.95128616 DT.100889636 DT.102838873 24/1507 AceView cDNA sequences (see all 1507 ):
W19399 BM470283 CA421240 AU104979 AA081525 BG570231 AW169711 BM983902 T32248 AB040462 AA329816 AA911774 AI699241 AI348346 AY123250 BM709730 AI066675 AW264441 BM677436 W21129 CB108617 AW305370 AA576133 BU729639 GeneLoc Exon Structure 5/18 Alternative Splicing Database (ASD) splice patterns (SP) for RTN4 (see all 18 ) About this scheme ExUns: 1 ^ 2a · 2b · 2c ^ 3a · 3b ^ 4a · 4b ^ 5 ^ 6 ^ 7 ^ 8 ^ 9 ^ 10a · 10b ^ 11 ^ 12a · 12b ^ 13 ^ 14a · 14b ^ 15a · 15b · 15c · 15d ^ 16 ^ SP1 :   -   -   -   -   -   -   -   -   -   -       -   -   -         -     -   -         SP2 :         -   -   -   -   -   -   -       -   -   -         -     -   -         SP3 :             -   -   -   -   -       -   -   -         -     -   -         SP4 :                 -   -   -       -   -   -         -     -   -         SP5 :                   -   -       -   -   -         -     -   -        
ExUns: 17a · 17b · 17c · 17d SP1 :         SP2 :         SP3 :         SP4 :         SP5 :        
ECgene alternative splicing isoforms for RTN4
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Expression for RTN4 gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section RTN4 expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: AAATGCCACA
About this image RTN4 expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table 1 LifeMap In Vivo Development Anatomical Compartment/Cell Tissue Anatomical Compartment
Cell Category (developmental path) Eye Retina Eye Expression: Positive Negative
Selective markerExperimental details:
Curated
Microarrays
In-situ hybridization
See RTN4 Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for RTN4 SOURCE GeneReport for Unigene cluster: Hs.743996 UniProtKB/Swiss-Prot: RTN4_HUMAN, Q9NQC3 Tissue specificity : Isoform 1 is specifically expressed in brain and testis and weakly in heart and skeletal muscle.Isoform 2 is widely expressed except for the liver. Isoform 3 is expressed in brain, skeletal muscle and adipocytes. Isoform 4 is testis-specific SABiosciences Expression via Pathway-Focused PCR Arrays including RTN4 : Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for RTN4Browse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse , rat RTN4 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat RTN4 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat RTN4 In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for RTN4
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Orthologsfor RTN4 gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of animals.
Orthologs for RTN4 gene from 5/21 species (see all 21 ) About this table
ENSEMBL Gene Tree for RTN4 (if available)TreeFam Gene Tree for RTN4 (if available)
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Paralogsfor RTN4 gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section Paralogs for RTN4 gene RTN3 2 RTN1 2 RTN2 2 6 SIMAP similar genes for RTN4 using alignment to 10 protein entries: RTN4_HUMAN (see all proteins ):NOGOC Nbla10545 Nbla00271 RTN3 RTN1 RTN2
RTN4 for paralogs About GeneDecksing
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Genomic Variantsfor RTN4 gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr 2 pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for RTN4 (55199325 - 55339757 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV): 2 variations for RTN4 2 CNVs : 97862 97861
SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing RTN4
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Disorders
/ Diseasesfor RTN4 gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database , Novoseek ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
RTN4 for disorders About GeneDecksing
OMIM gene information: 604475
OMIM disorders : --20/33 diseases for RTN4 (see all 33 ): About MalaCards inclusion body myositis ventricular septal defect amyotrophic lateral sclerosis temporal lobe epilepsy pathological gambling cerebral artery occlusion lateral sclerosis cerebrovascular accident aortic aneurysm adult t-cell leukemia multiple sclerosis dilated cardiomyopathy neurodegenerative disease myositis leukemia/lymphoma cardiomyopathy bipolar disorder pulmonary hypertension t-cell leukemia alzheimer's disease 3 diseases from the University of Copenhagen DISEASES database for RTN4 :Amyotrophic lateral sclerosis Multiple sclerosis Cerebrovascular accident 10/12 Novoseek disease relationships for RTN4 gene (see all 12 ) About this table
Disease
-log (P-Val)
Hits
PubMed IDs for Articles with Shared Sentences (# sentences)
amyotrophic lateral sclerosis
60.8
15
15786457 (3), 18419791 (2), 12270696 (1), 19889996 (1) (see all 9 )
epilepsy temporal lobe
33.9
4
15619232 (1), 15245492 (1), 16772867 (1), 17439704 (1)
neurodegenerative diseases
32.4
1
14644040 (1)
schizophrenia
24.9
28
12425946 (5), 15234466 (4), 17022955 (3), 14741411 (2) (see all 8 )
scar
24
3
11597097 (1), 16646157 (1), 15566408 (1)
multiple sclerosis
20.1
7
14644040 (2), 18495952 (2), 20437585 (1), 17356385 (1) (see all 5 )
small cell lung cancer
17.9
1
11494121 (1)
tumors
5.29
6
17592524 (2), 12510146 (1), 11891768 (1), 18685489 (1)
cancer
5.21
5
12510146 (2), 11494121 (2), 15781961 (1)
neurological disorders
3.72
2
14644040 (2)
Genetic Association Database (GAD): RTN4 Human Genome Epidemiology (HuGE) Navigator: RTN4 (10 documents) Export disorders for RTN4 gene to outside databases
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Publicationsfor RTN4 gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for RTN4 gene, integrated from 9 sources (see all 210 ) (see top 10 ): (articles sorted by number of sources associating them with RTN4) Utopia : connect your pdf to the dynamic world of online information
Identification of the Nogo inhibitor of axon regeneration as a Reticulon protein. (PubMed id 10667797) 1 , 2 , 3, 9 GrandPre T.... Strittmatter S.M. (2000) Assignment of the human reticulon 4 gene (RTN4) to chromosome 2p14-->2p13 by radiation hybrid mapping. (PubMed id 10773680) 1 , 2 , 3 Yang J.... Zhao S.-Y. (2000) Genomic structure and functional characterisation of the promoters of human and mouse nogo/rtn4. (PubMed id 12488097) 1 , 2 , 9 Oertle T.... Schwab M.E. (2003) No association between the genetic polymorphisms within RTN4 and schizophrenia in the Chinese population. (PubMed id 15234466) 1 , 4, 9 Chen W....He L. (2004) Nogo CAA 3'UTR Insertion polymorphism is not associated with Schizophrenia nor with bipolar disorder. (PubMed id 15820318) 1 , 4, 9 Gregorio S.P....Dias-Neto E. (2005) Nogos and the Nogo-66 receptor: factors inhibiting CNS neuron regeneration. (PubMed id 11891768) 1 , 2 , 9 Ng C.E.L. and Tang B.L. (2002) Identification of a receptor necessary for Nogo-B stimulated chemotaxis and morphogenesis of endothelial cells. (PubMed id 16835300) 1 , 2 , 9 Miao R.Q.... Sessa W.C. (2006) CAA insertion polymorphism in the 3'UTR of Nogo gene on 2p14 is not associated with schizophrenia. (PubMed id 15661375) 1 , 4, 9 Xiong L....Joober R. (2005) Nogo 3'-untranslated region CAA insertion: failure to replicate association with schizophrenia and demonstration of marked population difference in frequency of the insertion. (PubMed id 14741411) 1 , 4, 9 Covault J....Kranzler H. (2004) Reticulons RTN3 and RTN4-B/C interact with BACE1 and inhibit its ability to produce amyloid beta-protein. (PubMed id 16965550) 1 , 2 , 9 Murayama K.S.... Araki W. (2006) Gender-specific association of insertion/deletion polymorphisms in the nogo gene and chronic schizophrenia. (PubMed id 15953657) 1 , 4, 9 Tan E.C....Teo Y.Y. (2005) Identification of a receptor mediating Nogo-66 inhibition of axonal regeneration. (PubMed id 11201742) 1 , 2 , 9 Fournier A.E.... Strittmatter S.M. (2001) A class of dynamin-like GTPases involved in the generation of the tubular ER network. (PubMed id 19665976) 1 , 2 Hu J.... Blackstone C. (2009) Mapping of interaction domains mediating binding between BACE1 and RTN/Nogo proteins. (PubMed id 16979658) 1 , 2 He W.... Yan R. (2006) Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. (PubMed id 17081983) 1 , 2 Olsen J.V....Mann M. (2006) Reticulon family members modulate BACE1 activity and amyloid-beta peptide generation. (PubMed id 15286784) 1 , 2 He W.... Yan R. (2004) Large-scale cDNA transfection screening for genes related to cancer development and progression. (PubMed id 15498874) 1 , 2 Wan D....Gu J. (2004) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 1 , 2 Gerhard D.S....Malek J. (2004) Pro-apoptotic ASY/Nogo-B protein associates with ASYIP. (PubMed id 12811824) 1 , 2 Qi B.... Yutsudo M. (2003) Expression of a novel reticulon-like gene in human testis. (PubMed id 11866689) 1 , 2 Zhou Z.M.... Zhou K.Y. (2002) Inhibitor of neurite outgrowth in humans. (PubMed id 10667780) 1 , 2 Prinjha R.... Walsh F.S. (2000) A novel protein, RTN-XS, interacts with both Bcl-XL and Bcl-2 on endoplasmic reticulum and reduces their anti-apoptotic activity. (PubMed id 11126360) 1 , 2 Tagami S.... Tsujimoto Y. (2000) Cloning and functional analysis of cDNAs with open reading frames for 300 previously undefined genes expressed in CD34+ hematopoietic stem/progenitor cells. (PubMed id 11042152) 1 , 2 Zhang Q.-H.... Chen Z. (2000) Prediction of the coding sequences of unidentified human genes. XII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro. (PubMed id 10048485) 1 , 2 Nagase T....Ohara O. (1998) NOGO mRNA expression in adult and fetal human and rat nervous tissue and in weight drop injury. (PubMed id 11358445) 1 , 9 Josephson A....Spenger C. (2001) Muscle Nogo-A expression is a prognostic marker in lower motor neuron syndromes. (PubMed id 17455292) 1 , 9 Pradat P.F....Meininger V. (2007) Negative correlation of Nogo-A with the malignancy of oligodendroglial tumor. (PubMed id 17592524) 1 , 9 Xiong N.X....He Z.Q. (2007) Increased expression of Nogo-A in hippocampal neurons of patients with temporal lobe epilepsy. (PubMed id 15245492) 1 , 9 Bandtlow C.E....Sperk G. (2004) Biochemical characterization of the recombinant human Nogo-A ectodomain. (PubMed id 17437522) 1 , 9 Zander H....Skerra A. (2007) Increased expression of Noga-A in ALS muscle biopsies is not unique for this disease. (PubMed id 17626519) 1 , 9 Wojcik S....Askanas V. (2006) [Functional interaction of the C-terminal of Nogo protein with connexin 26 and the expression of Nogo's mRNA in the murine inner ear] (PubMed id 17029193) 1 , 9 Xiao Z.A....Pan Q. (2006) Nogo A, B and C expression in schizophrenia, depression and bipolar frontal cortex, and correlation of Nogo expression with CAA/TATC polymorphism in 3'-UTR. (PubMed id 17022955) 1 , 9 Novak G. and Tallerico T. (2006) Expression pattern of NOGO and NgR genes during human development. (PubMed id 15749087) 1 , 9 Al Halabiah H....Simonneau M. (2005) Schizophrenia and Nogo: elevated mRNA in cortex, and high prevalence of a homozygous CAA insert. (PubMed id 12425946) 1 , 9 Novak G....Tallerico T. (2002) Identification of Nogo as a novel indicator of heart failure. (PubMed id 17971502) 1 , 9 Bullard T.A....Blaxall B.C. (2008) NOGO is increased and binds to BACE1 in sporadic inclusion-body myositis and in A beta PP-overexpressing cultured human muscle fibers. (PubMed id 17764014) 1 , 9 Wojcik S....Askanas V. (2007) Nogo-A expression in the human hippocampus in normal aging and in Alzheimer disease. (PubMed id 16772867) 1 , 9 Gil V....del Rio J.A. (2006) Soluble Nogo-A in CSF is not a useful biomarker for multiple sclerosis. (PubMed id 18495952) 1 , 9 Lindsey J.W....Hatfield L.M. (2008) Nogo provides a molecular marker for diagnosis of amyotrophic lateral sclerosis. (PubMed id 12270696) 1 , 9 Dupuis L....Loeffler J.P. (2002) Identification and structural mechanism for a novel interaction between a ubiquitin ligase WWP1 and Nogo-A, a key inhibitor for central nervous system regeneration. (PubMed id 19035836) 1 , 9 Qin H....Song J. (2008) Nogo-a expression in glial CNS tumors: a tool to differentiate between oligodendrogliomas and other gliomas? (PubMed id 18685489) 1 , 9 Kuhlmann T....Bruck W. (2008) Multi-functional gene ASY/Nogo/RTN-X/RTN4: apoptosis, tumor suppression, and inhibition of neuronal regeneration. (PubMed id 12510146) 1 , 9 Watari A. and Yutsudo M. (2003) Protein microarray analysis identifies cyclic nucleot ide phosphodiesterase as an interactor of Nogo-A. (PubMed id 19508346) 1 , 9 Sumiyoshi K....Satoh J. (2010) Reticulon-4A (Nogo-A) redistributes protein disulfide isomerase to protect mice from SOD1-dependent amyotrophic lateral sclerosis. (PubMed id 19889996) 1 , 9 Yang Y.S....Strittmatter S.M. (2009) The N-terminal domain of Nogo-A inhibits cell adhesion and axonal outgrowth by an integrin-specific mechanism. (PubMed id 18234903) 1 , 9 Hu F. and Strittmatter S.M. (2008) The association between dilated cardiomyopathy and RTN4 3'UTR insertion/deletion polymorphisms. (PubMed id 18948092) 1 , 9 Zhou B....Zhang L. (2009) Human Nogo-C overexpression induces HEK293 cell apoptosis via a mechanism that involves JNK-c-Jun pathway. (PubMed id 16905119) 1 , 9 Chen Y....Zhang X. (2006) The p75 receptor acts as a displacement factor that releases Rho from Rho-GDI. (PubMed id 12692556) 1 , 9 Yamashita T. and Tohyama M. (2003) Myelin-associated glycoprotein as a functional ligand for the Nogo-66 receptor. (PubMed id 12089450) 1 , 9 Liu B.P.... Strittmatter S.M. (2002) Global landscape of HIV-human protein complexes. (PubMed id 22190034) 1 Jager S....Krogan N.J. (2012) RNT4 3'-UTR insertion/deletion polymorphisms are not a ssociated with atrial septal defect in Chinese Han population: a brief communica tion. (PubMed id 22313113) 1 Li H....Rao L. (2012) A census of human soluble protein complexes. (PubMed id 22939629) 1 Havugimana P.C....Emili A. (2012) Genetic variation in RTN4 3'-UTR and susceptibility to cervical squamous cell carcinoma. (PubMed id 22320844) 1 Shi S....Zhang L. (2012) Nogo-A: a useful marker for the diagnosis of oligodend roglioma and for identifying 1p19q codeletion. (PubMed id 21835431) 1 Marucci G....Foschini M.P. (2012) Initial characterization of the human central proteome. (PubMed id 21269460) 2 Burkard T.R.... Colinge J. (2011) The role of Nogo and the mitochondria-endoplasmic ret iculum unit in pulmonary hypertension. (PubMed id 21697531) 1 Sutendra G....Michelakis E.D. (2011) Nogo-A expression in oligodendroglial tumors. (PubMed id 20487307) 1 Jung T.Y....Lee M.C. (2011) Genome-wide YFP fluorescence complementation screen id entifies new regulators for telomere signaling in human cells. (PubMed id 21044950) 1 Lee O.H....Songyang Z. (2011) A multi-domain fragment of Nogo-A protein is a potent inhibitor of cortical axon regeneration via Nogo receptor 1. (PubMed id 21454605) 1 Huebner E.A....Strittmatter S.M. (2011) [Significance of Nogo-A expression of atrophic muscle fibers in diagnosis of amyotrophic lateral sclerosis]. (PubMed id 21503119) 1 Sun A.P....Fan D.S. (2011) A proteome-wide, quantitative survey of in vivo ubiqui tylation sites reveals widespread regulatory roles. (PubMed id 21890473) 1 Wagner S.A....Choudhary C. (2011) A directed protein interaction network for investigat ing intracellular signal transduction. (PubMed id 21900206) 1 Vinayagam A....Wanker E.E. (2011) The age- and amyloid-I^-related increases in Nogo B co ntribute to microglial activation. (PubMed id 21111015) 1 Murphy K.J....Lynch M.A. (2011) Systematic and quantitative assessment of the ubiquiti n-modified proteome. (PubMed id 21906983) 1 Kim W....Gygi S.P. (2011) Global identification of modular cullin-RING ligase su bstrates. (PubMed id 21963094) 1 Emanuele M.J....Elledge S.J. (2011) Nogo-B regulates migration and contraction of airway smooth muscle cells by decreasing ARPC 2/3 and increasing MYL-9 expression. (PubMed id 21251247) 1 Xu W....Li Q. (2011) Mass spectrometric analysis of lysine ubiquitylation r eveals promiscuity at site level. (PubMed id 21139048) 1 Danielsen J.M....Nielsen M.L. (2011) Endothelial reticulon-4B (Nogo-B) regulates ICAM-1-me diated leukocyte transmigration and acute inflammation. (PubMed id 21183689) 1 Di Lorenzo A....Sessa W.C. (2011) Nogo receptor 3, a paralog of Nogo-66 receptor 1 (NgR1 ), may function as a NgR1 co-receptor for Nogo-66. (PubMed id 22133682) 1 Zhang L....Zhang J. (2011) Analysis of RTN4 3'UTR insertion/deletion polymorphis ms in ventricular septal defect in a Chinese Han population. (PubMed id 21166502) 1 Chen Y....Rao L. (2011) System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation. (PubMed id 21406692) 2 Rigbolt K.T....Blagoev B. (2011) Nogo-B mediates HeLa cell adhesion and motility throu gh binding of Fibulin-5. (PubMed id 20599731) 1 Zhou S....Qi Y. (2010) Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PubMed id 20379614) 1 Rose J.E....Uhl G.R. (2010) Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis. (PubMed id 20068231) 2 Olsen J.V....Mann M. (2010) Epithelial reticulon 4B (Nogo-B) is an endogenous reg ulator of Th2-driven lung inflammation. (PubMed id 20975041) 1 Wright P.L....Sessa W.C. (2010) Dendritic spine alterations in neocortical pyramidal neurons following postnatal neuronal Nogo-A knockdown. (PubMed id 20938157) 1 Pradhan A.D....Kartje G.L. (2010) RTN3 and RTN4: Candidate modulators in vascular cell apoptosis and atherosclerosis. (PubMed id 20717916) 1 Chen Y....Xiang R. (2010) Overcoming amino-Nogo-induced inhibition of cell spre ading and neurite outgrowth by 12-O-tetradecanoylphorbol-13-acetate-type tumor promoters. (PubMed id 20018888) 1 Deng K....Walsh F.S. (2010) Identification and regulation of reticulon 4B (Nogo-B ) in renal tubular epithelial cells. (PubMed id 20971739) 1 Marin E.P....Sessa W.C. (2010) Atherosclerotic progression attenuates the expression of Nogo-B in autopsied coronary artery: pathology and virtual histology intrav ascular ultrasound analysis. (PubMed id 19654939) 1 Lee W.S....Ryu W.S. (2009) Polymorphisms in genes involved in neurodevelopment may be associated with altered brain morphology in schizophrenia: preliminary evidence. (PubMed id 19054571) 1 GregA^rio S.P....Dias-Neto E. (2009) Prefrontal cortex shotgun proteome analysis reveals altered calcium homeostasis and immune system imbalance in schizophrenia. (PubMed id 19165527) 1 Martins-de-Souza D....Turck C.W. (2009) Large-scale proteomics analysis of the human kinome. (PubMed id 19369195) 2 Oppermann F.S.... Daub H. (2009) Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions. (PubMed id 19690332) 2 Mayya V.... Han D.K. (2009) New mutations of Nogo-C in hepatocellular carcinoma. (PubMed id 18080785) 1 Chen Y.... Zhuang L. (2009) Common body mass index-associated variants confer ris k of extreme obesity. (PubMed id 19553259) 1 Cotsapas C....Daly M.J. (2009) Lysine acetylation targets protein complexes and co-regulates major cellular functions. (PubMed id 19608861) 2 Choudhary C.... Mann M. (2009) Phosphorylation of Nogo receptors suppresses Nogo sig naling, allowing neurite regeneration. (PubMed id 19336839) 1 Takei Y. (2009) Reassessment of corticospinal tract regeneration in N ogo-deficient mice. (PubMed id 19587271) 1 Lee J.K....Zheng B. (2009) The two-hydrophobic domain tertiary structure of reti culon proteins is critical for modulation of beta-secretase BACE1. (PubMed id 19405102) 1 Kume H....Araki W. (2009) Quantitative analysis of global ubiquitination in HeLa cells by mass spectrometry. (PubMed id 18781797) 1 Meierhofer D.... Kaiser P. (2008) Kinase-selective enrichment enables quantitative phosphoproteomics of the kinome across the cell cycle. (PubMed id 18691976) 2 Daub H.... Mann M. (2008) Reshaping of the endoplasmic reticulum limits the rat e for nuclear envelope formation. (PubMed id 18779370) 1 Anderson D.J. and Hetzer M.W. (2008) A quantitative atlas of mitotic phosphorylation. (PubMed id 18669648) 2 Dephoure N.... Gygi S.P. (2008) Systematic meta-analyses and field synopsis of genetic association studies in schizophrenia: the SzGene database. (PubMed id 18583979) 1 Allen N.C....Bertram L. (2008) Soluble Nogo-A, an inhibitor of axonal regeneration, as a biomarker for multiple sclerosis. (PubMed id 17242333) 1 Jurewicz A....Selmaj K. (2007) Regulation of Nogo-B expression in the lesion of aortic aneurysms. (PubMed id 17645629) 1 Pan J.W....Rui Y.C. (2007) Roles of glial p75NTR in axonal regeneration. (PubMed id 17335080) 1 Zhou X.F. and Li H.Y. (2007) Systematic identification of SH3 domain-mediated human protein-protein interactions by peptide array target screening. (PubMed id 17474147) 1 Wu C....Li S.S. (2007) Large-scale mapping of human protein-protein interactions by mass spectrometry. (PubMed id 17353931) 1 Ewing R.M.... Figeys D. (2007) Nogo in the injured spinal cord. (PubMed id 16629624) 1 Schweigreiter R. and Bandtlow C.E. (2006) Down-regulation of ASY/Nogo transcription associated with progression of adult T-cell leukemia/lymphoma. (PubMed id 16646068) 1 Shimakage M....Yutsudo M. (2006) The consensus coding sequences of human breast and colorectal cancers. (PubMed id 16959974) 2 Sjoeblom T.... Velculescu V.E. (2006) The LIFEdb database in 2006. (PubMed id 16381901) 1 Mehrle A....Wiemann S. (2006) A TNF receptor family member, TROY, is a coreceptor with Nogo receptor in mediating the inhibitory activity of myelin inhibitors. (PubMed id 15694321) 1 Park J.B....He Z. (2005) A human protein-protein interaction network: a resource for annotating the proteome. (PubMed id 16169070) 1 Stelzl U.... Wanker E.E. (2005) Towards a proteome-scale map of the human protein-protein interaction network. (PubMed id 16189514) 1 Rual J.F....Vidal M. (2005) Generation and annotation of the DNA sequences of human chromosomes 2 and 4. (PubMed id 15815621) 2 Hillier L.W....Wilson R.K. (2005) Nogo-B is a new physiological substrate for MAPKAP-K2. (PubMed id 16095439) 1 Rousseau S....Cohen P. (2005) Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039) 1 Ota T.... Sugano S. (2004) Reticulon 4 in chondrocytic cells: barosensitivity and intracellular localization. (PubMed id 15147731) 1 Sironen R.K....Lammi M.J. (2004) Phosphoproteomic analysis of the developing mouse brain. (PubMed id 15345747) 1 Ballif B.A.... Gygi S.P. (2004) From ORFeome to biology: a functional genomics pipeline. (PubMed id 15489336) 1 Wiemann S....Poustka A. (2004) A new role for Nogo as a regulator of vascular remodeling. (PubMed id 15034570) 1 Acevedo L....Sessa W.C. (2004) Nogo-A at CNS paranodes is a ligand of Caspr: possible regulation of K(+) channel localization. (PubMed id 14592966) 1 Nie D.Y....Xiao Z.C. (2003) Do cancer cells die because of Nogo-B? (PubMed id 12618765) 1 Oertle T....Schwab M.E. (2003) Myelin-associated inhibitors of axonal regeneration i n the adult mammalian CNS. (PubMed id 12951563) 1 Filbin M.T. (2003) A p75(NTR) and Nogo receptor complex mediates repulsive signaling by myelin-associated glycoprotein. (PubMed id 12426574) 1 Wong S.T....Poo M.M. (2002) Identification and characterization of a novel Nogo-interacting mitochondrial protein (NIMP). (PubMed id 12067236) 1 Hu W.-H....Bethea J.R. (2002) Nogo-66 receptor antagonist peptide promotes axonal regeneration. (PubMed id 12037567) 1 GrandPre T.... Strittmatter S.M. (2002) Nogo-A expression in mature oligodendrocytes of rat spinal cord in association with specific molecules. (PubMed id 12377379) 1 Taketomi M....Ide C. (2002) Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932) 1 Strausberg R.L....Marra M.A. (2002) Nogo-A is a myelin-associated neurite outgrowth inhibitor and an antigen for monoclonal antibody IN-1. (PubMed id 10667796) 1 Chen M.S....Schwab M.E. (2000) DNA cloning using in vitro site-specific recombination. (PubMed id 11076863) 1 Hartley J.L....Brasch M.A. (2000) Molecular analysis of Nogo expression in the hippocampus during development and following lesion and seizure. (PubMed id 12692091) 9 Meier S....Savaskan N.E. (2003) The Nogo receptor, its ligands and axonal regeneration in the spinal cord; a review. (PubMed id 12815233) 9 Hunt D....Anderson P.N. (2002) Hippocampal Nogo-A and neo-Timm's staining in amygdala kindling rats. (PubMed id 17439704) 9 Takeda Y....Kobayashi H. (2007) Nogo and Nogo-66 receptor in human and chick: implications for development and regeneration. (PubMed id 15305291) 9 O'Neill P....Ferretti P. (2004) Nogo signaling and non-physical injury-induced nervous system pathology. (PubMed id 15619232) 9 Teng F.Y. and Tang B.L. (2005) Soluble Nogo receptor down-regulates expression of ne uronal Nogo-A to enhance axonal regeneration. (PubMed id 19901030) 9 Peng X....Mata M. (2010) Nogo-A and Nogo-66 receptor in amyotrophic lateral sclerosis. (PubMed id 18419791) 9 Teng F.Y. and Tang B.L. (2008) Nogo, a star protein in reticulon family. (PubMed id 17704847) 9 Wang M....Lu Y.P. (2006) Cytokines and neurotrophic factors fail to affect Nogo-A mRNA expression in differentiated human neurones: implications for inflammation-related axonal regeneration in the central nervous system. (PubMed id 11972796) 9 Satoh J.I. and Kuroda Y. (2002) The N- and C-termini of the human Nogo molecules are intrinsically unstructured: bioinformatics, CD, NMR characterization, and functional implications. (PubMed id 17397058) 9 Li M. and Song J. (2007) Silencing Nogo-A promotes functional recovery in demy elinating disease. (PubMed id 20437585) 9 Yang Y....Lovett-Racke A.E. (2010) Molecular regulation of Nogo-A in neural cells: Novel insights into structure and function. (PubMed id 20171301) 9 Bongiorno D. and Petratos S. (2010) Changes of Nogo-A and receptor NgR in the lumbar spinal cord of ALS model mice. (PubMed id 19243684) 9 Miyazaki K....Abe K. (2009) Effect of Nogo-A gene inhibition on dopamine release in PC12 cells. (PubMed id 19112410) 9 Xiong N.X....Zhang F.C. (2008) Nogo: a molecular determinant of axonal growth and regeneration. (PubMed id 11597097) 9 Grandpre T. and Strittmatter S.M. (2001) Oligodendrocyte precursor cells differentially expressing Nogo-A but not MAG are more permissive to neurite outgrowth than mature oligodendrocytes. (PubMed id 19236864) 9 Ma Z....Xu X.M. (2009) Characterization of myelin ligand complexes with neuronal Nogo-66 receptor family members. (PubMed id 17189258) 9 Lauren J....Strittmatter S.M. (2007) Nogo-A is a reliable oligodendroglial marker in adult human and mouse CNS and in demyelinated lesions. (PubMed id 17356385) 9 Kuhlmann T....Bruck W. (2007) No go for brain tumors? (PubMed id 15781961) 9 Teng F.Y. and Tang B.L. (2005) Structural characterization of the human Nogo-A functional domains. Solution structure of Nogo-40, a Nogo-66 receptor antagonist enhancing injured spinal cord regeneration. (PubMed id 15317586) 9 Li M....Song J. (2004) New insights on neuronal alterations in jimpy mutant brain. (PubMed id 15139292) 9 Harsan L....Ghandour M.S. (2004) Serum and cerebrospinal fluid antibodies to Nogo-A in patients with multiple sclerosis and acute neurological disorders. (PubMed id 14644040) 9 Reindl M....Bandtlow C.E. (2003) Nogo-A and myelin-associated glycoprotein mediate neurite growth inhibition by antagonistic regulation of RhoA and Rac1. (PubMed id 12451136) 9 Niederost B....Bandtlow C.E. (2002) Cell autonomous function of Nogo and reticulons: The emerging story at the endoplasmic reticulum. (PubMed id 18330888) 9 Teng F.Y. and Tang B.L. (2008) Targeting the Nogo-A signalling pathway to promote recovery following acute CNS injury. (PubMed id 17692015) 9 Walmsley A.R. and Mir A.K. (2007) Knocking-down of Nogo-A gene expression in PC12 cell line by plasmid-based RNAi. (PubMed id 17828504) 9 Xiong N....Yao D. (2007) Reticulon proteins: emerging players in neurodegenerative diseases. (PubMed id 16505974) 9 Yan R....Zhou X. (2006) The neurite outgrowth inhibitor Nogo-A promotes denervation in an amyotrophic lateral sclerosis model. (PubMed id 17039253) 9 Jokic N....Loeffler J.P. (2006) Expression pattern of NOGO-A protein in the human ner vous system. (PubMed id 15616791) 9 Buss A....Brook G.A. (2005) Truncated soluble Nogo receptor binds Nogo-66 and blocks inhibition of axon growth by myelin. (PubMed id 12388594) 9 Fournier A.E....Strittmatter S.M. (2002) Nogo-A expressed in Schwann cells impairs axonal rege neration after peripheral nerve injury. (PubMed id 12379801) 9 Pot C....Schwab M.E. (2002) Genomic organization of the human NSP gene, prototype of a novel gene family encoding reticulons. (PubMed id 8833145) 9 Roebroek A.J.M.... Van de Ven W.J.M. (1996) Pincher-generated Nogo-A endosomes mediate growth con e collapse and retrograde signaling. (PubMed id 20083601) 9 Joset A....Schwab M.E. (2010) Bone marrow stromal cells stimulate neurite outgrowth over neural proteoglycans (CSPG), myelin associated glycoprotein and Nogo-A. (PubMed id 17234155) 9 Wright K.T....Johnson W.E. (2007) Neuronal responses to myelin are mediated by rho kina se. (PubMed id 16441511) 9 Alabed Y.Z....Fournier A.E. (2006) Nogo goes in the pure water: solution structure of Nogo-60 and design of the structured and buffer-soluble Nogo-54 for enhancing CNS regeneration. (PubMed id 16877707) 9 Li M....Song J. (2006) Nogo-A interacts with the Nogo-66 receptor through multiple sites to create an isoform-selective subnanomolar agonist. (PubMed id 15930377) 9 Hu F....Strittmatter S.M. (2005) Nogo expression in muscle correlates with amyotrophic lateral sclerosis severity. (PubMed id 15786457) 9 Jokic N....Meininger V. (2005) Inhibition of Nogo: a key strategy to increase regeneration, plasticity and functional recovery of the lesioned central nervous system. (PubMed id 16338758) 9 Buchli A.D. and Schwab M.E. (2005) Promotion of axon regeneration by myelin-associated glycoprotein and Nogo through divergent signals downstream of Gi/G. (PubMed id 15282288) 9 Hasegawa Y....Yamashita T. (2004) Olfactory ensheathing cell phenotype following implantation in the lesioned spinal cord. (PubMed id 14618270) 9 Woodhall E....Chuah M.I. (2003) Regeneration in the central nervous system. (PubMed id 12543264) 9 Bandtlow C.E. (2003) Link of a new type of apoptosis-inducing gene ASY/Nogo-B to human cancer. (PubMed id 11494121) 9 Li Q....Yutsudo M. (2001) Carbamazepine protects against megencephaly and abnormal expression of BDNF and Nogo signaling components in the mceph/mceph mouse. (PubMed id 16990009) 9 Lavebratt C....Schalling M. (2006) Expression of neurodevelopmental markers by cultured porcine neural precursor cells. (PubMed id 16100001) 9 Schwartz P.H....Klassen H. (2005) Identification of a functional epitope of the Nogo receptor by a combinatorial approach using ribosome display. (PubMed id 16061255) 9 Schimmele B. and Pluckthun A. (2005) Structure and axon outgrowth inhibitor binding of the Nogo-66 receptor and related proteins. (PubMed id 12839991) 9 Barton W.A.... Nikolov D.B. (2003) Nogo (Reticulon 4) expression in innervated and denervated mouse skeletal muscle. (PubMed id 12691732) 9 Magnusson C....Tagerud S. (2003) Nogo on the go. (PubMed id 12408839) 9 McKerracher L. and Winton M.J. (2002) Nogo-receptor gene activity: cellular localization and developmental regulation of mRNA in mice and humans. (PubMed id 12378589) 9 Josephson A....Spenger C. (2002) Neuroendocrine-specific protein C, a marker of neuronal differentiation, is reduced in brain of patients with Down syndrome and Alzheimer's disease. (PubMed id 11006125) 9 Kim S.H....Lubec G. (2000) Receptors for myelin inhibitors: Structures and thera peutic opportunities. (PubMed id 19619659) 9 Cao Z....Walsh F.S. (2010) Nogo-A expresses on neural stem cell surface. (PubMed id 20374087) 9 Hou T....Xiao C. (2010) NgR acts as an inhibitor to axonal regeneration in adults. (PubMed id 17981689) 9 Zhang S....Qin X. (2008) Regional-specific regulation of BDNF and trkB correlates with nigral dopaminergic cell sprouting following unilateral nigrostriatal axotomy. (PubMed id 18338800) 9 Garcia Navia J.T....Venero J.L. (2008) The therapeutic effects of Rho-ROCK inhibitors on CNS disorders. (PubMed id 18827856) 9 Kubo T....Yamashita T. (2008) Nogo-A inhibition induces recovery from neglect in ra ts. (PubMed id 17963852) 9 Brenneman M.M....Schwab M.E. (2008) Rho-ROCK inhibitors for the treatment of CNS injury. (PubMed id 18221230) 9 Kubo T. and Yamashita T. (2007) TROY and LINGO-1 expression in astrocytes and macrophages/microglia in multiple sclerosis lesions. (PubMed id 17239012) 9 Satoh J....Konno H. (2007) The Nogo-66 receptor NgR1 is required only for the acute growth cone-collapsing but not the chronic growth-inhibitory actions of myelin inhibitors. (PubMed id 17611264) 9 Chivatakarn O....Giger R.J. (2007) Expression of Nogo-A in human muscle fibers is not specific for amyotrophic lateral sclerosis. (PubMed id 17894379) 9 Askanas V....Engel W.K. (2007) Rho-ROCK inhibitors as emerging strategies to promote nerve regeneration. (PubMed id 17692017) 9 Kubo T....Yamashita T. (2007) Nogo Receptor 1 (RTN4R) as a candidate gene for schizophrenia: analysis using human and mouse genetic approaches. (PubMed id 18043741) 9 Hsu R....Gogos J.A. (2007) Pathophysiological mechanisms for actions of the neurotrophins. (PubMed id 17107602) 9 Twiss J.L....Schanen N.C. (2006) Myelin-associated glycoprotein inhibits microtubule assembly by a Rho-kinase-dependent mechanism. (PubMed id 16595691) 9 Mimura F....Yamashita T. (2006) Polyamine and aminoguanidine treatments to promote structural and functional recovery in the adult mammalian brain after injury: a brief literature review and preliminary data about their combined administration. (PubMed id 16646157) 9 Schimchowitsch S. and Cassel J.C. (2006) Growth-associated gene and protein expression in the region of axonal sprouting in the aged brain after stroke. (PubMed id 16782355) 9 Li S. and Carmichael S.T. (2006) MAG induces regulated intramembrane proteolysis of the p75 neurotrophin receptor to inhibit neurite outgrowth. (PubMed id 15953414) 9 Domeniconi M....Filbin M.T. (2005) Amyotrophic lateral sclerosis: new developments in diagnostic markers. (PubMed id 16909023) 9 Dengler R....Grosskreutz J. (2005) Nogo-A and nogo receptor expression in demyelinating lesions of multiple sclerosis. (PubMed id 15751227) 9 Satoh J....Yamamura T. (2005) Zinc metalloproteinase-mediated cleavage of the human Nogo-66 receptor. (PubMed id 15331667) 9 Walmsley A.R....Frentzel S. (2004) Oligodendrocyte myelin glycoprotein (OMgp): evolution, structure and function. (PubMed id 15145622) 9 Vourc'h P. and Andres C. (2004) [Inhibitory proteins against axon regeneration in the central nervous system] (PubMed id 15727207) 9 Hu J.G....Xu X.M. (2004)
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
External Searches for RTN4 gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Genome Databases showing RTN4 gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Other Databases showing RTN4 gene
(According to HUGE )
About This Section
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Specialized Databases showing RTN4 gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
Name Description
PharmGKB entry for RTN4 Pharmacogenomics, SNPs, Pathways ATLAS Chromosomes in Cancer entry for RTN4 Genetics and Cytogenetics in Oncology and Haematology SHMPD http://shmpd.bii.a-star.edu.sg/gene.php?genestart=R&genename=RTN4+%40+NOGO Protein Spotlight http://web.expasy.org/spotlight/back_issues/sptlt069.shtml
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
About This Section Patent Information for RTN4 gene: Search GeneIP for patents involving RTN4 GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Productsfor RTN4 gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript and LifeMap BioReagents , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences ), In Situ Hybridization Assays from Advanced Cell Diagnostics About This Section
OriGene Antibodies for RTN4 OriGene shRNA RFP for RTN4 OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for RTN4 OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for RTN4 OriGene Protein Over-expression Lysate for RTN4 Browse OriGene Fluorogenic Cell Assay Kits OriGene siRNA for RTN4 OriGene 3'-UTR Clone for RTN4 OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for RTN4 OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for RTN4 Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs OriGene Purified Protein for RTN4 OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling OriGene Custom Antibody Services for RTN4 OriGene Custom Protein Services for RTN4 OriGene Custom Immunoassay Development
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat RTN4 QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing RTN4 QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat RTN4 QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat RTN4 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat RTN4 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat RTN4
Search Tocris compounds for RTN4
RTN4 Proteins, Antibodies, CLIAs, and ELISAs
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for RTN4
ThermoFisher Antibodies for RTN4
Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat RTN4
Jump to Section...
Aliases for RTN4
Databases for RTN4
Disorders / Diseases for RTN4
Domains / Families for RTN4
Drugs / Compounds for RTN4
Expression for RTN4
Function for RTN4
Genomic Views for RTN4
Intellectual Property for RTN4
Orthologs for RTN4
Paralogs for RTN4
Pathways / Interactions for RTN4
Products for RTN4
Proteins for RTN4
Publications for RTN4
Search Box for RTN4
Summaries for RTN4
Transcripts for RTN4
Variants for RTN4
TOP
BOTTOM