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Aliases for RSBN1L Gene

Aliases for RSBN1L Gene

  • Round Spermatid Basic Protein 1-Like 2 3

External Ids for RSBN1L Gene

Previous GeneCards Identifiers for RSBN1L Gene

  • GC07P076970
  • GC07P077163
  • GC07P077325
  • GC07P071928

Summaries for RSBN1L Gene

GeneCards Summary for RSBN1L Gene

RSBN1L (Round Spermatid Basic Protein 1-Like) is a Protein Coding gene. An important paralog of this gene is RSBN1.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RSBN1L Gene

Genomics for RSBN1L Gene

Regulatory Elements for RSBN1L Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for RSBN1L Gene

77,696,426 bp from pter
77,783,022 bp from pter
86,597 bases
Plus strand

Genomic View for RSBN1L Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for RSBN1L Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RSBN1L Gene

Proteins for RSBN1L Gene

  • Protein details for RSBN1L Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Round spermatid basic protein 1-like protein
    Protein Accession:
    Secondary Accessions:
    • C9K0P1
    • Q6ZS58
    • Q6ZVI9
    • Q86X48

    Protein attributes for RSBN1L Gene

    846 amino acids
    Molecular mass:
    94870 Da
    Quaternary structure:
    No Data Available
    • Sequence=AAH46353.1; Type=Miscellaneous discrepancy; Note=Contaminating sequence. Potential poly-A sequence.; Evidence={ECO:0000305}; Sequence=BAC85872.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305};

    Alternative splice isoforms for RSBN1L Gene


neXtProt entry for RSBN1L Gene

Proteomics data for RSBN1L Gene at MOPED

Post-translational modifications for RSBN1L Gene

  • Ubiquitination at Lys 548
  • Modification sites at PhosphoSitePlus

Other Protein References for RSBN1L Gene

No data available for DME Specific Peptides for RSBN1L Gene

Domains & Families for RSBN1L Gene

Protein Domains for RSBN1L Gene


Suggested Antigen Peptide Sequences for RSBN1L Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry



  • Belongs to the round spermatid basic protein 1 family.
  • Belongs to the round spermatid basic protein 1 family.
genes like me logo Genes that share domains with RSBN1L: view

No data available for Gene Families for RSBN1L Gene

Function for RSBN1L Gene

genes like me logo Genes that share phenotypes with RSBN1L: view

Animal Model Products

miRNA for RSBN1L Gene

miRTarBase miRNAs that target RSBN1L

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for RSBN1L

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , Transcription Factor Targets and HOMER Transcription for RSBN1L Gene

Localization for RSBN1L Gene

Subcellular locations from UniProtKB/Swiss-Prot for RSBN1L Gene

Subcellular locations from

Jensen Localization Image for RSBN1L Gene COMPARTMENTS Subcellular localization image for RSBN1L gene
Compartment Confidence
nucleus 3
plasma membrane 2

Gene Ontology (GO) - Cellular Components for RSBN1L Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with RSBN1L: view

Pathways & Interactions for RSBN1L Gene

SuperPathways for RSBN1L Gene

No Data Available

Gene Ontology (GO) - Biological Process for RSBN1L Gene


No data available for Pathways by source and SIGNOR curated interactions for RSBN1L Gene

Drugs & Compounds for RSBN1L Gene

No Compound Related Data Available

Transcripts for RSBN1L Gene

Unigene Clusters for RSBN1L Gene

Round spermatid basic protein 1-like:
Representative Sequences:

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for RSBN1L

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for RSBN1L Gene

ExUns: 1 ^ 2 ^ 3 ^ 4a · 4b ^ 5 ^ 6a · 6b · 6c
SP1: -
SP2: - -

Relevant External Links for RSBN1L Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RSBN1L Gene

mRNA expression in normal human tissues for RSBN1L Gene

Protein differential expression in normal tissues from HIPED for RSBN1L Gene

This gene is overexpressed in Lung (54.4).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MOPED, and MaxQB for RSBN1L Gene

SOURCE GeneReport for Unigene cluster for RSBN1L Gene Hs.592289

genes like me logo Genes that share expression patterns with RSBN1L: view

Protein tissue co-expression partners for RSBN1L Gene

- Elite partner

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for RSBN1L Gene

Orthologs for RSBN1L Gene

This gene was present in the common ancestor of animals.

Orthologs for RSBN1L Gene

Organism Taxonomy Gene Similarity Type Details
(Bos Taurus)
Mammalia RSBN1L 35
  • 92.17 (n)
  • 91.78 (a)
  • 93 (a)
(Canis familiaris)
Mammalia RSBN1L 35
  • 94.51 (n)
  • 94.92 (a)
  • 95 (a)
(Mus musculus)
Mammalia Rsbn1l 35
  • 85.62 (n)
  • 82.4 (a)
Rsbn1l 16
Rsbn1l 36
  • 81 (a)
(Pan troglodytes)
Mammalia RSBN1L 35
  • 99.64 (n)
  • 99.64 (a)
  • 99 (a)
(Rattus norvegicus)
Mammalia Rsbn1l 35
  • 84.83 (n)
  • 83.25 (a)
(Monodelphis domestica)
Mammalia RSBN1L 36
  • 89 (a)
(Ornithorhynchus anatinus)
Mammalia RSBN1L 36
  • 86 (a)
(Gallus gallus)
Aves RSBN1L 35
  • 81.94 (n)
  • 81.59 (a)
  • 81 (a)
(Anolis carolinensis)
Reptilia RSBN1L 36
  • 60 (a)
tropical clawed frog
(Silurana tropicalis)
Amphibia rsbn1l 35
  • 72.61 (n)
  • 72.46 (a)
fruit fly
(Drosophila melanogaster)
Insecta CG10600 36
  • 16 (a)
(Caenorhabditis elegans)
Secernentea dpy-21 36
  • 11 (a)
sea squirt
(Ciona intestinalis)
Ascidiacea Cin.8474 35
sea squirt
(Ciona savignyi)
Ascidiacea CSA.789 36
  • 54 (a)
Species with no ortholog for RSBN1L:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • zebrafish (Danio rerio)

Evolution for RSBN1L Gene

Gene Tree for RSBN1L (if available)
Gene Tree for RSBN1L (if available)

Paralogs for RSBN1L Gene

Paralogs for RSBN1L Gene

(1) SIMAP similar genes for RSBN1L Gene using alignment to 3 proteins:

genes like me logo Genes that share paralogs with RSBN1L: view

Variants for RSBN1L Gene

Sequence variations from dbSNP and Humsavar for RSBN1L Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type MAF
rs929375 -- 77,752,725(-) TCATG(G/T)GTGTG intron-variant
rs2009034 -- 77,742,182(-) TGTGT(A/G)TTTTT intron-variant
rs2040952 -- 77,778,396(-) TACTT(C/T)TAAGA missense, reference
rs2040953 -- 77,741,161(-) acaaa(C/T)acaaa intron-variant
rs2108029 -- 77,701,171(-) TTGTT(G/T)TTTTT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for RSBN1L Gene

Variant ID Type Subtype PubMed ID
nsv831039 CNV Gain 17160897
nsv365896 CNV Insertion 16902084

Variation tolerance for RSBN1L Gene

Residual Variation Intolerance Score: 16.51% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 3.53; 55.63% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for RSBN1L Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for RSBN1L Gene

Disorders for RSBN1L Gene

Relevant External Links for RSBN1L

Genetic Association Database (GAD)
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
genes like me logo Genes that share disorders with RSBN1L: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RSBN1L Gene

Publications for RSBN1L Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 67
  2. The BioPlex Network: A Systematic Exploration of the Human Interactome. (PMID: 26186194) Huttlin E.L. … Gygi S.P. (Cell 2015) 67
  3. Temporal proteomics of NGF-TrkA signaling identifies an inhibitory role for the E3 ligase Cbl-b in neuroblastoma cell differentiation. (PMID: 25921289) Emdal K.B. … Olsen J.V. (Sci Signal 2015) 67
  4. Uncovering global SUMOylation signaling networks in a site-specific manner. (PMID: 25218447) Hendriks I.A. … Vertegaal A.C. (Nat. Struct. Mol. Biol. 2014) 67
  5. The palmitoyl acyltransferase HIP14 shares a high proportion of interactors with huntingtin: implications for a role in the pathogenesis of Huntington's disease. (PMID: 24705354) Butland S.L. … Hayden M.R. (Hum. Mol. Genet. 2014) 67

Products for RSBN1L Gene

Sources for RSBN1L Gene

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