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Aliases for RRP7BP Gene

Aliases for RRP7BP Gene

  • Ribosomal RNA Processing 7 Homolog B (S. Cerevisiae), Pseudogene 2 3
  • RRP7B 3 4
  • Ribosomal RNA Processing 7 Homolog B (S. Cerevisiae) 2
  • Putative Gastric Cancer Antigen Zg14-Like Protein 4
  • DJ222E13.2 3

External Ids for RRP7BP Gene

Previous HGNC Symbols for RRP7BP Gene

  • RRP7B

Summaries for RRP7BP Gene

GeneCards Summary for RRP7BP Gene

RRP7BP (Ribosomal RNA Processing 7 Homolog B (S. Cerevisiae), Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RRP7BP Gene

Genomics for RRP7BP Gene

Genomic Location for RRP7BP Gene

Start:
42,555,223 bp from pter
End:
42,582,038 bp from pter
Size:
26,816 bases
Orientation:
Minus strand

Genomic View for RRP7BP Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for RRP7BP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RRP7BP Gene

No data available for Regulatory Elements for RRP7BP Gene

Proteins for RRP7BP Gene

  • Protein details for RRP7BP Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9NSQ0-RRP7B_HUMAN
    Recommended name:
    Putative ribosomal RNA-processing protein 7 homolog B
    Protein Accession:
    Q9NSQ0
    Secondary Accessions:
    • B3KQ98

    Protein attributes for RRP7BP Gene

    Size:
    103 amino acids
    Molecular mass:
    12575 Da
    Quaternary structure:
    No Data Available

neXtProt entry for RRP7BP Gene

Proteomics data for RRP7BP Gene at MOPED

Post-translational modifications for RRP7BP Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for RRP7BP Gene

Domains for RRP7BP Gene

Protein Domains for RRP7BP Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

Q9NSQ0

UniProtKB/Swiss-Prot:

RRP7B_HUMAN :
  • Q9NSQ0
Family:
  • Belongs to the RRP7 family.
genes like me logo Genes that share domains with RRP7BP: view

No data available for Gene Families and Suggested Antigen Peptide Sequences for RRP7BP Gene

Function for RRP7BP Gene

Phenotypes for RRP7BP Gene

GenomeRNAi human phenotypes for RRP7BP:
genes like me logo Genes that share phenotypes with RRP7BP: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for RRP7BP Gene

Localization for RRP7BP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RRP7BP Gene

Pathways for RRP7BP Gene

SuperPathways for RRP7BP Gene

No Data Available

Interacting Proteins for RRP7BP Gene

Gene Ontology (GO) - Biological Process for RRP7BP Gene

None

No data available for Pathways by source for RRP7BP Gene

Transcripts for RRP7BP Gene

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for RRP7BP

Primer Products

  • OriGene qSTAR qPCR primer pairs in human,mouse,rat for RRP7BP
  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for RRP7BP Gene

No ASD Table

Relevant External Links for RRP7BP Gene

GeneLoc Exon Structure for
RRP7BP
ECgene alternative splicing isoforms for
RRP7BP

Expression for RRP7BP Gene

mRNA expression in normal human tissues for RRP7BP Gene

genes like me logo Genes that share expressions with RRP7BP: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for RRP7BP Gene

Orthologs for RRP7BP Gene

Evolution for RRP7BP Gene

ENSEMBL:
Gene Tree for RRP7BP (if available)
TreeFam:
Gene Tree for RRP7BP (if available)

No data available for Orthologs for RRP7BP Gene

Paralogs for RRP7BP Gene

No data available for Paralogs for RRP7BP Gene

Variants for RRP7BP Gene

Sequence variations from dbSNP and Humsavar for RRP7BP Gene

SNP ID Clin Chr 22 pos Sequence Context AA Info Type MAF
rs137063 -- 42,575,734(+) GGGGG(-/G)TGATG intron-variant
rs137064 -- 42,575,981(+) CTTTT(C/T)GGCTG nc-transcript-variant
rs137065 -- 42,576,222(+) AGAAC(C/T)GCCCT intron-variant
rs137066 -- 42,576,312(+) CTGGC(A/G)CTGCC intron-variant
rs137067 -- 42,576,362(+) ACCCA(A/G)CCAGG intron-variant

Relevant External Links for RRP7BP Gene

HapMap Linkage Disequilibrium report
RRP7BP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for RRP7BP Gene

Disorders for RRP7BP Gene

No disorders were found for RRP7BP Gene.

No data available for UniProtKB/Swiss-Prot for RRP7BP Gene

Publications for RRP7BP Gene

  1. Signal sequence and keyword trap in silico for selection of full- length human cDNAs encoding secretion or membrane proteins from oligo- capped cDNA libraries. (PMID: 16303743) Otsuki T. … Isogai T. (DNA Res. 2005) 3 4
  2. A COFRADIC protocol to study protein ubiquitination. (PMID: 24816145) Stes E. … Gevaert K. (J. Proteome Res. 2014) 3
  3. Reevaluating human gene annotation: a second-generation analysis of chromosome 22. (PMID: 12529303) Collins J.E. … Dunham I. (Genome Res. 2003) 4
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  5. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3

Products for RRP7BP Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate RRP7BP
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for RRP7BP
    • Block miRNA regulation of RRP7BP using miScript Target Protectors

    Sources for RRP7BP Gene

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