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Aliases for RPSAP9 Gene

Aliases for RPSAP9 Gene

  • Ribosomal Protein SA Pseudogene 9 2 3 5
  • Laminin Receptor 1 Pseudogene 9 2 3
  • RPSA_20_986 3
  • LAMR1P9 3

External Ids for RPSAP9 Gene

Previous HGNC Symbols for RPSAP9 Gene

  • LAMR1P9

Previous GeneCards Identifiers for RPSAP9 Gene

  • GC09U900700
  • GC09P078204
  • GC09P079014

Summaries for RPSAP9 Gene

GeneCards Summary for RPSAP9 Gene

RPSAP9 (Ribosomal Protein SA Pseudogene 9) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPSAP9 Gene

Genomics for RPSAP9 Gene

Regulatory Elements for RPSAP9 Gene

Enhancers for RPSAP9 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09F076607 1.1 Ensembl ENCODE 11.2 +216.2 216224 14.0 ZFP64 NFRKB RAD21 SCRT2 ZNF548 FOS CEBPB REST ZNF518A ZNF623 GCNT1 RPSAP9 PRUNE2 LOC105376095 GC09P076757
GH09F077017 0.6 ENCODE 11.1 +618.2 618231 0.0 CBX8 RNF2 SUZ12 CBX2 REST EZH2 RPSAP9 FOXB2 ENSG00000229857
GH09F077019 0.6 ENCODE 11.1 +620.6 620571 0.1 CBX8 RNF2 SUZ12 CBX2 CTBP2 TRIM28 EZH2 RPSAP9 FOXB2 ENSG00000229857
GH09F076571 0.5 ENCODE 11.2 +173.3 173301 1.1 RING1 CBX8 RNF2 RPSAP9 LOC392352 LOC105376095
GH09F076530 0.4 Ensembl 6.6 +132.2 132202 1.2 RAD51 RPSAP9 GCNT1 PIR37722 LOC392352
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPSAP9 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPSAP9 Gene

76,398,599 bp from pter
76,400,038 bp from pter
1,440 bases
Plus strand

Genomic View for RPSAP9 Gene

Genes around RPSAP9 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPSAP9 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPSAP9 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPSAP9 Gene

Proteins for RPSAP9 Gene

Post-translational modifications for RPSAP9 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPSAP9 Gene

Domains & Families for RPSAP9 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPSAP9 Gene

Function for RPSAP9 Gene

genes like me logo Genes that share phenotypes with RPSAP9: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPSAP9 Gene

Localization for RPSAP9 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPSAP9 Gene

Pathways & Interactions for RPSAP9 Gene

SuperPathways for RPSAP9 Gene

No Data Available

Interacting Proteins for RPSAP9 Gene

Gene Ontology (GO) - Biological Process for RPSAP9 Gene


No data available for Pathways by source and SIGNOR curated interactions for RPSAP9 Gene

Transcripts for RPSAP9 Gene

mRNA/cDNA for RPSAP9 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for RPSAP9 Gene

Ribosomal protein SA pseudogene 9:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for RPSAP9 Gene

No ASD Table

Relevant External Links for RPSAP9 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RPSAP9 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPSAP9 Gene

mRNA differential expression in normal tissues according to GTEx for RPSAP9 Gene

This gene is overexpressed in Testis (x4.7).

NURSA nuclear receptor signaling pathways regulating expression of RPSAP9 Gene:


SOURCE GeneReport for Unigene cluster for RPSAP9 Gene:

genes like me logo Genes that share expression patterns with RPSAP9: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPSAP9 Gene

Orthologs for RPSAP9 Gene

Evolution for RPSAP9 Gene

Gene Tree for RPSAP9 (if available)
Gene Tree for RPSAP9 (if available)

No data available for Orthologs for RPSAP9 Gene

Paralogs for RPSAP9 Gene

No data available for Paralogs for RPSAP9 Gene

Variants for RPSAP9 Gene

Sequence variations from dbSNP and Humsavar for RPSAP9 Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type
rs112775890 -- 76,397,777(+) GAAGA(A/G)TAAAC upstream-variant-2KB
rs116856341 -- 76,400,131(+) AAACT(A/G)TTCTG downstream-variant-500B
rs13298074 -- 76,397,451(+) ttttt(A/T)ttttt upstream-variant-2KB
rs139669470 -- 76,397,276(+) GATTC(C/T)TTCTC upstream-variant-2KB
rs140243318 -- 76,398,383(+) TACCA(A/G)TTAGA upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for RPSAP9 Gene

Variant ID Type Subtype PubMed ID
nsv6570 CNV insertion 18451855
nsv972402 CNV duplication 23825009

Relevant External Links for RPSAP9 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for RPSAP9 Gene

Disorders for RPSAP9 Gene

Relevant External Links for RPSAP9

Genetic Association Database (GAD)
Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for RPSAP9 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPSAP9 Gene

Publications for RPSAP9 Gene

  1. Genome-wide association scan for survival on dialysis in African-Americans with type 2 diabetes. (PMID: 21546767) Murea M. … Freedman B.I. (Am. J. Nephrol. 2011) 3 46 64
  2. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  3. Proteomic Analysis of the EWS-Fli-1 Interactome Reveals the Role of the Lysosome in EWS-Fli-1 Turnover. (PMID: 24999758) Elzi D.J. … Shiio Y. (J. Proteome Res. 2014) 3 64
  4. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 64

Products for RPSAP9 Gene

Sources for RPSAP9 Gene

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