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Aliases for RPSAP61 Gene

Aliases for RPSAP61 Gene

  • Ribosomal Protein SA Pseudogene 61 2 3 5
  • RPSA_31_1776 3

External Ids for RPSAP61 Gene

Previous GeneCards Identifiers for RPSAP61 Gene

  • GC0XP044470
  • GC0XP044601

Summaries for RPSAP61 Gene

GeneCards Summary for RPSAP61 Gene

RPSAP61 (Ribosomal Protein SA Pseudogene 61) is a Pseudogene.

Additional gene information for RPSAP61 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPSAP61 Gene

Genomics for RPSAP61 Gene

Regulatory Elements for RPSAP61 Gene

Enhancers for RPSAP61 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0XH044705 0.8 ENCODE 0.3 -34.8 -34831 0 SOX13 FOXA2 SAP130 MLX TAL1 RARA TEAD3 RCOR1 NR2F6 CREM RPL19P20 RPSAP61 PIR53424
GH0XH044708 0.7 ENCODE 0.3 -32.3 -32342 0 LEF1 TAL1 CCNT2 TCF12 CC2D1A MTA3 POLR2A GATA2 NCOR1 SMARCE1 DUSP21 RPSAP61 PIR53424
GH0XH044675 0.9 ENCODE 0.2 -65.5 -65482 0 INSM2 ZNF76 KLF17 FEZF1 ZNF2 GLIS2 ZNF366 ZSCAN5C EGR2 SP3 PIR53424 RPSAP61
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPSAP61 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPSAP61 Gene

Chromosome:
X
Start:
44,741,011 bp from pter
End:
44,742,034 bp from pter
Size:
1,024 bases
Orientation:
Plus strand

Genomic View for RPSAP61 Gene

Genes around RPSAP61 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPSAP61 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPSAP61 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPSAP61 Gene

Proteins for RPSAP61 Gene

Post-translational modifications for RPSAP61 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPSAP61 Gene

Domains & Families for RPSAP61 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPSAP61 Gene

Function for RPSAP61 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPSAP61
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPSAP61 Gene

Localization for RPSAP61 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPSAP61 Gene

Pathways & Interactions for RPSAP61 Gene

SuperPathways for RPSAP61 Gene

No Data Available

Interacting Proteins for RPSAP61 Gene

Gene Ontology (GO) - Biological Process for RPSAP61 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPSAP61 Gene

Drugs & Compounds for RPSAP61 Gene

No Compound Related Data Available

Transcripts for RPSAP61 Gene

mRNA/cDNA for RPSAP61 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPSAP61
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RPSAP61 Gene

No ASD Table

Relevant External Links for RPSAP61 Gene

GeneLoc Exon Structure for
RPSAP61
ECgene alternative splicing isoforms for
RPSAP61

Expression for RPSAP61 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPSAP61 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPSAP61 Gene:

RPSAP61
genes like me logo Genes that share expression patterns with RPSAP61: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPSAP61 Gene

Orthologs for RPSAP61 Gene

Evolution for RPSAP61 Gene

ENSEMBL:
Gene Tree for RPSAP61 (if available)
TreeFam:
Gene Tree for RPSAP61 (if available)

No data available for Orthologs for RPSAP61 Gene

Paralogs for RPSAP61 Gene

No data available for Paralogs for RPSAP61 Gene

Variants for RPSAP61 Gene

Relevant External Links for RPSAP61 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPSAP61

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPSAP61 Gene

Disorders for RPSAP61 Gene

No disorders were found for RPSAP61 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPSAP61 Gene

Publications for RPSAP61 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60
  2. Proteomic Analysis of the EWS-Fli-1 Interactome Reveals the Role of the Lysosome in EWS-Fli-1 Turnover. (PMID: 24999758) Elzi DJ … Shiio Y (Journal of proteome research 2014) 3 60

Products for RPSAP61 Gene

Sources for RPSAP61 Gene

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