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Aliases for RPSAP57 Gene

Aliases for RPSAP57 Gene

  • Ribosomal Protein SA Pseudogene 57 2 3 5
  • RPSA_29_1604 3

External Ids for RPSAP57 Gene

Previous GeneCards Identifiers for RPSAP57 Gene

  • GC18P050563
  • GC18P052412

Summaries for RPSAP57 Gene

GeneCards Summary for RPSAP57 Gene

RPSAP57 (Ribosomal Protein SA Pseudogene 57) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPSAP57 Gene

Genomics for RPSAP57 Gene

Regulatory Elements for RPSAP57 Gene

Enhancers for RPSAP57 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH18G054742 1.1 FANTOM5 ENCODE dbSUPER 0.7 -2.0 -2012 0.8 CTCF BHLHE40 HLF BACH1 RAD21 NFE2 FOS MAFK CCDC68 RPSAP57 GC18P054727
GH18G054741 0.9 ENCODE dbSUPER 0.7 -4.3 -4349 0.2 JUN MAFG CEBPB EP300 JUND ATF3 NFE2L1 NFE2 FOS MAFK RPSAP57 GC18P054727
GH18G054740 0.8 ENCODE dbSUPER 0.7 -4.1 -4069 0.2 MAFF ATF3 MAFG FOS EMSY MAFK RPSAP57 GC18P054727
GH18G054734 0.9 ENCODE dbSUPER 0.4 -10.5 -10469 0.2 JUN BHLHE40 JUNB CEBPB EP300 RAD21 RFX5 FOSL1 JUND ATF3 GC18P054727 RPSAP57
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPSAP57 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPSAP57 Gene

Chromosome:
18
Start:
54,744,673 bp from pter
End:
54,745,656 bp from pter
Size:
984 bases
Orientation:
Plus strand

Genomic View for RPSAP57 Gene

Genes around RPSAP57 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPSAP57 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPSAP57 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPSAP57 Gene

Proteins for RPSAP57 Gene

Post-translational modifications for RPSAP57 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPSAP57 Gene

Domains & Families for RPSAP57 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPSAP57 Gene

Function for RPSAP57 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPSAP57 Gene

Localization for RPSAP57 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPSAP57 Gene

Pathways & Interactions for RPSAP57 Gene

SuperPathways for RPSAP57 Gene

No Data Available

Interacting Proteins for RPSAP57 Gene

Gene Ontology (GO) - Biological Process for RPSAP57 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPSAP57 Gene

Drugs & Compounds for RPSAP57 Gene

No Compound Related Data Available

Transcripts for RPSAP57 Gene

mRNA/cDNA for RPSAP57 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPSAP57 Gene

No ASD Table

Relevant External Links for RPSAP57 Gene

GeneLoc Exon Structure for
RPSAP57
ECgene alternative splicing isoforms for
RPSAP57

Expression for RPSAP57 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPSAP57 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPSAP57 Gene:

RPSAP57
genes like me logo Genes that share expression patterns with RPSAP57: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPSAP57 Gene

Orthologs for RPSAP57 Gene

Evolution for RPSAP57 Gene

ENSEMBL:
Gene Tree for RPSAP57 (if available)
TreeFam:
Gene Tree for RPSAP57 (if available)

No data available for Orthologs for RPSAP57 Gene

Paralogs for RPSAP57 Gene

No data available for Paralogs for RPSAP57 Gene

Variants for RPSAP57 Gene

Relevant External Links for RPSAP57 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPSAP57

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPSAP57 Gene

Disorders for RPSAP57 Gene

Relevant External Links for RPSAP57

Genetic Association Database (GAD)
RPSAP57

No disorders were found for RPSAP57 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPSAP57 Gene

Publications for RPSAP57 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPSAP57 Gene

Sources for RPSAP57 Gene

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