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Aliases for RPSAP55 Gene

Aliases for RPSAP55 Gene

  • Ribosomal Protein SA Pseudogene 55 2 3 5
  • RPSA_28_1433 3

External Ids for RPSAP55 Gene

Previous GeneCards Identifiers for RPSAP55 Gene

  • GC15P050964
  • GC15P053176

Summaries for RPSAP55 Gene

GeneCards Summary for RPSAP55 Gene

RPSAP55 (Ribosomal Protein SA Pseudogene 55) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPSAP55 Gene

Genomics for RPSAP55 Gene

Regulatory Elements for RPSAP55 Gene

Enhancers for RPSAP55 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around RPSAP55 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPSAP55 Gene

Chromosome:
15
Start:
52,885,519 bp from pter
End:
52,886,542 bp from pter
Size:
1,024 bases
Orientation:
Plus strand

Genomic View for RPSAP55 Gene

Genes around RPSAP55 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPSAP55 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPSAP55 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPSAP55 Gene

Proteins for RPSAP55 Gene

Post-translational modifications for RPSAP55 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPSAP55 Gene

Domains & Families for RPSAP55 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPSAP55 Gene

Function for RPSAP55 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPSAP55 Gene

Localization for RPSAP55 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPSAP55 Gene

Pathways & Interactions for RPSAP55 Gene

SuperPathways for RPSAP55 Gene

No Data Available

Interacting Proteins for RPSAP55 Gene

Gene Ontology (GO) - Biological Process for RPSAP55 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPSAP55 Gene

Drugs & Compounds for RPSAP55 Gene

No Compound Related Data Available

Transcripts for RPSAP55 Gene

mRNA/cDNA for RPSAP55 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPSAP55 Gene

No ASD Table

Relevant External Links for RPSAP55 Gene

GeneLoc Exon Structure for
RPSAP55
ECgene alternative splicing isoforms for
RPSAP55

Expression for RPSAP55 Gene

mRNA expression in normal human tissues for RPSAP55 Gene

Protein differential expression in normal tissues from HIPED for RPSAP55 Gene

This gene is overexpressed in Skin (52.8).

Integrated Proteomics: protein expression in normal tissues and cell lines from for RPSAP55 Gene



genes like me logo Genes that share expression patterns with RPSAP55: view

Protein tissue co-expression partners for RPSAP55 Gene

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for RPSAP55 Gene

Orthologs for RPSAP55 Gene

Evolution for RPSAP55 Gene

ENSEMBL:
Gene Tree for RPSAP55 (if available)
TreeFam:
Gene Tree for RPSAP55 (if available)

No data available for Orthologs for RPSAP55 Gene

Paralogs for RPSAP55 Gene

No data available for Paralogs for RPSAP55 Gene

Variants for RPSAP55 Gene

Relevant External Links for RPSAP55 Gene

HapMap Linkage Disequilibrium report
RPSAP55

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPSAP55 Gene

Disorders for RPSAP55 Gene

Relevant External Links for RPSAP55

Genetic Association Database (GAD)
RPSAP55

No disorders were found for RPSAP55 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPSAP55 Gene

Publications for RPSAP55 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 67
  2. Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. (PMID: 23251661) Comuzzie A.G. … Butte N.F. (PLoS ONE 2012) 3
  3. Dynamics of cullin-RING ubiquitin ligase network revealed by systematic quantitative proteomics. (PMID: 21145461) Bennett E.J. … Harper J.W. (Cell 2010) 3

Products for RPSAP55 Gene

Sources for RPSAP55 Gene

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