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Aliases for RPSAP53 Gene

Aliases for RPSAP53 Gene

  • Ribosomal Protein SA Pseudogene 53 2 3 5
  • RPSA_19_1317 3

External Ids for RPSAP53 Gene

Previous GeneCards Identifiers for RPSAP53 Gene

  • GC13M066739
  • GC13M067841

Summaries for RPSAP53 Gene

GeneCards Summary for RPSAP53 Gene

RPSAP53 (Ribosomal Protein SA Pseudogene 53) is a Pseudogene.

Additional gene information for RPSAP53 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPSAP53 Gene

Genomics for RPSAP53 Gene

GeneHancer (GH) Regulatory Elements for RPSAP53 Gene

Promoters and enhancers for RPSAP53 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13I067283 Enhancer 0.7 dbSUPER 0.4 -16.0 -16009 1.2 ELF3 SOX13 FOXA2 ZNF644 ATF7 CREM HOMEZ MAFK GATAD2A SOX5 LINC00364 RPSAP53 LOC105370246
GH13I067277 Enhancer 0.5 ENCODE dbSUPER 0.4 -10.8 -10816 1.6 CTCF LINC00364 RPSAP53 LOC105370246
GH13I067299 Enhancer 0.5 ENCODE 0.3 -31.9 -31864 1.7 MAFF JUND FOS MAFK LOC105370246 RPSAP53 GC13M067284
GH13I067280 Enhancer 0.3 dbSUPER 0.4 -14.1 -14122 2.3 POLR2A LINC00364 RPSAP53 LOC105370246
GH13I067284 Enhancer 0.2 dbSUPER 0.4 -17.5 -17488 1.1 LINC00364 RPSAP53 LOC105370246 GC13M067284
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPSAP53 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPSAP53 Gene

Genomic Locations for RPSAP53 Gene
chr13:67,266,755-67,267,780
(GRCh38/hg38)
Size:
1,026 bases
Orientation:
Minus strand
chr13:67,840,887-67,841,912
(GRCh37/hg19)

Genomic View for RPSAP53 Gene

Genes around RPSAP53 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPSAP53 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPSAP53 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPSAP53 Gene

Proteins for RPSAP53 Gene

Post-translational modifications for RPSAP53 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPSAP53 Gene

Domains & Families for RPSAP53 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPSAP53 Gene

Function for RPSAP53 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPSAP53 Gene

Localization for RPSAP53 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPSAP53 Gene

Pathways & Interactions for RPSAP53 Gene

SuperPathways for RPSAP53 Gene

No Data Available

Interacting Proteins for RPSAP53 Gene

Gene Ontology (GO) - Biological Process for RPSAP53 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPSAP53 Gene

Drugs & Compounds for RPSAP53 Gene

No Compound Related Data Available

Transcripts for RPSAP53 Gene

mRNA/cDNA for RPSAP53 Gene

(2) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPSAP53 Gene

No ASD Table

Relevant External Links for RPSAP53 Gene

GeneLoc Exon Structure for
RPSAP53
ECgene alternative splicing isoforms for
RPSAP53

Expression for RPSAP53 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPSAP53 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPSAP53 Gene:

RPSAP53
genes like me logo Genes that share expression patterns with RPSAP53: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPSAP53 Gene

Orthologs for RPSAP53 Gene

Evolution for RPSAP53 Gene

ENSEMBL:
Gene Tree for RPSAP53 (if available)
TreeFam:
Gene Tree for RPSAP53 (if available)

No data available for Orthologs for RPSAP53 Gene

Paralogs for RPSAP53 Gene

No data available for Paralogs for RPSAP53 Gene

Variants for RPSAP53 Gene

Additional Variant Information for RPSAP53 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPSAP53

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPSAP53 Gene

Disorders for RPSAP53 Gene

Additional Disease Information for RPSAP53

Genetic Association Database
(GAD)

No disorders were found for RPSAP53 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPSAP53 Gene

Publications for RPSAP53 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. Genome-wide association identifies the ABO blood group as a major locus associated with serum levels of soluble E-selectin. (PMID: 19729612) Paterson AD … Diabetes Control and Complications Trial/Epidemiology of Diabetes Interventions and Complications Research Group (Arteriosclerosis, thrombosis, and vascular biology 2009) 44 58
  3. Framingham Heart Study 100K Project: genome-wide associations for blood pressure and arterial stiffness. (PMID: 17903302) Levy D … Mitchell GF (BMC medical genetics 2007) 44 58

Products for RPSAP53 Gene

Sources for RPSAP53 Gene

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