Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPSAP50 Gene

Subcategory (RNA class) for RPSAP50 Gene


Aliases for RPSAP50 Gene

  • Ribosomal Protein SA Pseudogene 50 2 3 5
  • RPSA_24_1172 3

External Ids for RPSAP50 Gene

ORGUL Members for RPSAP50 Gene

Previous GeneCards Identifiers for RPSAP50 Gene

  • GC11P109359
  • GC11P109853

Summaries for RPSAP50 Gene

GeneCards Summary for RPSAP50 Gene

RPSAP50 (Ribosomal Protein SA Pseudogene 50) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPSAP50 Gene

Genomics for RPSAP50 Gene

Regulatory Elements for RPSAP50 Gene

Enhancers for RPSAP50 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11G109984 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.7 +2.9 2926 1.1 TBP TBL1XR1 BMI1 ZNF766 RELB IKZF2 BCLAF1 CREM CBFB ZBTB11 ZC3H12C ENSG00000270423 RPSAP50
GH11G109970 1.4 Ensembl ENCODE dbSUPER 0.4 -10.2 -10156 2.7 HDGF TBP PKNOX1 TBL1XR1 BMI1 RAD21 ZNF366 GATA2 CBX5 FOS RPSAP50 LOC105369484
GH11G109980 0.5 ENCODE 0.7 -1.0 -969 1.1 MTA2 IKZF1 KLF17 IKZF2 ZBTB20 ZC3H12C RPSAP50 LOC105369484
GH11G109955 1 ENCODE dbSUPER 0.3 -25.7 -25706 1.1 TBP MXI1 TBL1XR1 ASH2L RBBP5 EBF1 RELA ARID3A POLR2A CBX5 LOC105369484 RPSAP50
GH11G109960 0.9 Ensembl ENCODE 0.3 -21.3 -21258 1.0 TEAD4 MAFG ZBTB40 NR2F2 BCL11A NFE2 HNF4A MAFK LOC105369484 RPSAP50
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPSAP50 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPSAP50 Gene

109,982,192 bp from pter
109,983,043 bp from pter
852 bases
Plus strand

Genomic View for RPSAP50 Gene

Genes around RPSAP50 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPSAP50 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPSAP50 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPSAP50 Gene

Proteins for RPSAP50 Gene

Post-translational modifications for RPSAP50 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPSAP50 Gene

Domains & Families for RPSAP50 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPSAP50 Gene

Function for RPSAP50 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPSAP50 Gene

Localization for RPSAP50 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPSAP50 Gene

Pathways & Interactions for RPSAP50 Gene

SuperPathways for RPSAP50 Gene

No Data Available

Interacting Proteins for RPSAP50 Gene

Gene Ontology (GO) - Biological Process for RPSAP50 Gene


No data available for Pathways by source and SIGNOR curated interactions for RPSAP50 Gene

Drugs & Compounds for RPSAP50 Gene

No Compound Related Data Available

Transcripts for RPSAP50 Gene

mRNA/cDNA for RPSAP50 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPSAP50 Gene

No ASD Table

Relevant External Links for RPSAP50 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RPSAP50 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPSAP50 Gene

Protein differential expression in normal tissues from HIPED for RPSAP50 Gene

This gene is overexpressed in Skin (66.3).

Integrated Proteomics: protein expression in normal tissues and cell lines from MOPED for RPSAP50 Gene

Protein tissue co-expression partners for RPSAP50 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPSAP50 Gene:

genes like me logo Genes that share expression patterns with RPSAP50: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPSAP50 Gene

Orthologs for RPSAP50 Gene

Evolution for RPSAP50 Gene

Gene Tree for RPSAP50 (if available)
Gene Tree for RPSAP50 (if available)

No data available for Orthologs for RPSAP50 Gene

Paralogs for RPSAP50 Gene

No data available for Paralogs for RPSAP50 Gene

Variants for RPSAP50 Gene

Relevant External Links for RPSAP50 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPSAP50 Gene

Disorders for RPSAP50 Gene

Relevant External Links for RPSAP50

Genetic Association Database (GAD)

No disorders were found for RPSAP50 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPSAP50 Gene

Publications for RPSAP50 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPSAP50 Gene

Sources for RPSAP50 Gene

Loading form....