Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPSAP5 Gene

Aliases for RPSAP5 Gene

  • Ribosomal Protein SA Pseudogene 5 2 3 5
  • Laminin Receptor 1 Pseudogene 5 2 3
  • RPSA_22_1412 3
  • LAMR1P5 3

External Ids for RPSAP5 Gene

Previous HGNC Symbols for RPSAP5 Gene

  • LAMR1P5

Previous GeneCards Identifiers for RPSAP5 Gene

  • GC14M102911
  • GC14M103842

Summaries for RPSAP5 Gene

GeneCards Summary for RPSAP5 Gene

RPSAP5 (Ribosomal Protein SA Pseudogene 5) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPSAP5 Gene

Genomics for RPSAP5 Gene

Regulatory Elements for RPSAP5 Gene

Enhancers for RPSAP5 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH14G103378 1.3 FANTOM5 ENCODE 0.7 -3.5 -3539 0.8 ATF1 ARNT TCF12 ZNF121 GATA2 ZNF143 ZNF263 JUNB NCOA1 MBD2 MARK3 ENSG00000260285 ZFYVE21 RPSAP5
GH14G103372 1.1 Ensembl ENCODE 0.7 +2.2 2239 1.2 TBP HDAC1 PKNOX1 ZSCAN4 FOS CREM ZNF362 ZBTB11 ZNF592 SMARCA4 MARK3 CKB ZFYVE21 RPSAP5 HMGB3P26
GH14G103382 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -7.7 -7685 0.7 ARID4B THRB ZNF48 RARA GLIS2 FOS PCBP1 NR2F2 ZNF579 MAFF MARK3 ZFYVE21 TNFAIP2 EIF5 RPSAP5
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPSAP5 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPSAP5 Gene

Chromosome:
14
Start:
103,373,963 bp from pter
End:
103,374,992 bp from pter
Size:
1,030 bases
Orientation:
Minus strand

Genomic View for RPSAP5 Gene

Genes around RPSAP5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPSAP5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPSAP5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPSAP5 Gene

Proteins for RPSAP5 Gene

Post-translational modifications for RPSAP5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPSAP5 Gene

Domains & Families for RPSAP5 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPSAP5 Gene

Function for RPSAP5 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPSAP5 Gene

Localization for RPSAP5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPSAP5 Gene

Pathways & Interactions for RPSAP5 Gene

SuperPathways for RPSAP5 Gene

No Data Available

Interacting Proteins for RPSAP5 Gene

Gene Ontology (GO) - Biological Process for RPSAP5 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPSAP5 Gene

Drugs & Compounds for RPSAP5 Gene

No Compound Related Data Available

Transcripts for RPSAP5 Gene

mRNA/cDNA for RPSAP5 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPSAP5 Gene

No ASD Table

Relevant External Links for RPSAP5 Gene

GeneLoc Exon Structure for
RPSAP5
ECgene alternative splicing isoforms for
RPSAP5

Expression for RPSAP5 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPSAP5 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPSAP5 Gene:

RPSAP5
genes like me logo Genes that share expression patterns with RPSAP5: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPSAP5 Gene

Orthologs for RPSAP5 Gene

Evolution for RPSAP5 Gene

ENSEMBL:
Gene Tree for RPSAP5 (if available)
TreeFam:
Gene Tree for RPSAP5 (if available)

No data available for Orthologs for RPSAP5 Gene

Paralogs for RPSAP5 Gene

No data available for Paralogs for RPSAP5 Gene

Variants for RPSAP5 Gene

Relevant External Links for RPSAP5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPSAP5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPSAP5 Gene

Disorders for RPSAP5 Gene

No disorders were found for RPSAP5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPSAP5 Gene

Publications for RPSAP5 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPSAP5 Gene

Sources for RPSAP5 Gene

Content
Loading form....