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Aliases for RPSAP48 Gene

Aliases for RPSAP48 Gene

  • Ribosomal Protein SA Pseudogene 48 2 3 5
  • RPSA_15_943 3

External Ids for RPSAP48 Gene

Previous GeneCards Identifiers for RPSAP48 Gene

  • GC08M111186

Summaries for RPSAP48 Gene

GeneCards Summary for RPSAP48 Gene

RPSAP48 (Ribosomal Protein SA Pseudogene 48) is a Pseudogene.

Additional gene information for RPSAP48 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPSAP48 Gene

Genomics for RPSAP48 Gene

Regulatory Elements for RPSAP48 Gene

Enhancers for RPSAP48 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08H110059 1.1 Ensembl ENCODE 0.2 +45.2 45153 1 ELF3 PKNOX1 FOXA2 ARID4B DMAP1 ZSCAN9 RAD21 ZNF143 THAP11 SMARCA5 GC08P110049 RPSAP48
GH08H110096 0.3 FANTOM5 0.4 +9.0 9009 0 RPSAP48 GC08P110049
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPSAP48 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPSAP48 Gene

Chromosome:
8
Start:
110,105,076 bp from pter
End:
110,105,964 bp from pter
Size:
889 bases
Orientation:
Minus strand

Genomic View for RPSAP48 Gene

Genes around RPSAP48 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPSAP48 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPSAP48 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPSAP48 Gene

Proteins for RPSAP48 Gene

Post-translational modifications for RPSAP48 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPSAP48 Gene

Domains & Families for RPSAP48 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPSAP48 Gene

Function for RPSAP48 Gene

Phenotypes From GWAS Catalog for RPSAP48 Gene

Phenotypes for RPSAP48 Gene

GenomeRNAi human phenotypes for RPSAP48:
genes like me logo Genes that share phenotypes with RPSAP48: view

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPSAP48
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPSAP48 Gene

Localization for RPSAP48 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPSAP48 Gene

Pathways & Interactions for RPSAP48 Gene

SuperPathways for RPSAP48 Gene

No Data Available

Interacting Proteins for RPSAP48 Gene

Gene Ontology (GO) - Biological Process for RPSAP48 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPSAP48 Gene

Drugs & Compounds for RPSAP48 Gene

No Compound Related Data Available

Transcripts for RPSAP48 Gene

mRNA/cDNA for RPSAP48 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPSAP48
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RPSAP48 Gene

No ASD Table

Relevant External Links for RPSAP48 Gene

GeneLoc Exon Structure for
RPSAP48
ECgene alternative splicing isoforms for
RPSAP48

Expression for RPSAP48 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPSAP48 Gene

mRNA differential expression in normal tissues according to GTEx for RPSAP48 Gene

This gene is overexpressed in Heart - Atrial Appendage (x45.8).

NURSA nuclear receptor signaling pathways regulating expression of RPSAP48 Gene:

RPSAP48
genes like me logo Genes that share expression patterns with RPSAP48: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPSAP48 Gene

Orthologs for RPSAP48 Gene

Evolution for RPSAP48 Gene

ENSEMBL:
Gene Tree for RPSAP48 (if available)
TreeFam:
Gene Tree for RPSAP48 (if available)

No data available for Orthologs for RPSAP48 Gene

Paralogs for RPSAP48 Gene

No data available for Paralogs for RPSAP48 Gene

Variants for RPSAP48 Gene

Relevant External Links for RPSAP48 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPSAP48

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPSAP48 Gene

Disorders for RPSAP48 Gene

Relevant External Links for RPSAP48

Genetic Association Database (GAD)
RPSAP48

No disorders were found for RPSAP48 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPSAP48 Gene

Publications for RPSAP48 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60
  2. UGT1A1 is a major locus influencing bilirubin levels in African Americans. (PMID: 22085899) Chen G … Rotimi CN (European journal of human genetics : EJHG 2012) 45 60
  3. A genome-wide association for kidney function and endocrine-related traits in the NHLBI's Framingham Heart Study. (PMID: 17903292) Hwang SJ … Fox CS (BMC medical genetics 2007) 45 60
  4. Genome-wide association and linkage analyses of hemostatic factors and hematological phenotypes in the Framingham Heart Study. (PMID: 17903294) Yang Q … O'Donnell CJ (BMC medical genetics 2007) 45 60
  5. Genome-wide association with bone mass and geometry in the Framingham Heart Study. (PMID: 17903296) Kiel DP … Karasik D (BMC medical genetics 2007) 45 60

Products for RPSAP48 Gene

Sources for RPSAP48 Gene

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