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Aliases for RPSAP46 Gene

Aliases for RPSAP46 Gene

  • Ribosomal Protein SA Pseudogene 46 2 3 5
  • RPSA_14_827 3

External Ids for RPSAP46 Gene

Previous GeneCards Identifiers for RPSAP46 Gene

  • GC07M100637
  • GC07M100847
  • GC07M100851

Summaries for RPSAP46 Gene

GeneCards Summary for RPSAP46 Gene

RPSAP46 (Ribosomal Protein SA Pseudogene 46) is a Pseudogene.

Additional gene information for RPSAP46 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPSAP46 Gene

Genomics for RPSAP46 Gene

GeneHancer (GH) Regulatory Elements for RPSAP46 Gene

Promoters and enhancers for RPSAP46 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I101204 Enhancer 0.5 Ensembl 550.8 0.0 -8 0.4 ETV1 CEBPB MCM2 GABPA DGAT2L7P RPSAP46 FIS1 SRRT MEPCE LRCH4 ZNHIT1
GH07I101214 Enhancer 0.7 ENCODE 0.4 -10.5 -10476 0.4 ZSCAN4 MZF1 ZNF76 ZIC2 ZNF2 ZNF121 ZNF366 SCRT2 PRDM10 ZNF600 FIS1 SRRT GIGYF1 PLOD3 ZNHIT1 RPSAP46
GH07I101216 Enhancer 0.7 ENCODE 0.4 -10.2 -10186 0.2 ZSCAN4 MZF1 ZNF76 ZIC2 ZNF2 ZNF121 SCRT2 PRDM10 ZNF600 KLF8 SRRT GIGYF1 PLOD3 ZNHIT1 RPSAP46
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPSAP46 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPSAP46 Gene

Genomic Locations for RPSAP46 Gene
chr7:101,203,600-101,204,571
(GRCh38/hg38)
Size:
972 bases
Orientation:
Minus strand
chr7:100,846,881-100,847,852
(GRCh37/hg19)

Genomic View for RPSAP46 Gene

Genes around RPSAP46 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPSAP46 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPSAP46 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPSAP46 Gene

Proteins for RPSAP46 Gene

Post-translational modifications for RPSAP46 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPSAP46 Gene

Domains & Families for RPSAP46 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPSAP46 Gene

Function for RPSAP46 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPSAP46 Gene

Localization for RPSAP46 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPSAP46 Gene

Pathways & Interactions for RPSAP46 Gene

SuperPathways for RPSAP46 Gene

No Data Available

Interacting Proteins for RPSAP46 Gene

Gene Ontology (GO) - Biological Process for RPSAP46 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPSAP46 Gene

Drugs & Compounds for RPSAP46 Gene

No Compound Related Data Available

Transcripts for RPSAP46 Gene

mRNA/cDNA for RPSAP46 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPSAP46 Gene

No ASD Table

Relevant External Links for RPSAP46 Gene

GeneLoc Exon Structure for
RPSAP46
ECgene alternative splicing isoforms for
RPSAP46

Expression for RPSAP46 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPSAP46 Gene

mRNA differential expression in normal tissues according to GTEx for RPSAP46 Gene

This gene is overexpressed in Colon - Transverse (x7.2), Small Intestine - Terminal Ileum (x6.7), and Liver (x4.2).

NURSA nuclear receptor signaling pathways regulating expression of RPSAP46 Gene:

RPSAP46
genes like me logo Genes that share expression patterns with RPSAP46: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPSAP46 Gene

Orthologs for RPSAP46 Gene

Evolution for RPSAP46 Gene

ENSEMBL:
Gene Tree for RPSAP46 (if available)
TreeFam:
Gene Tree for RPSAP46 (if available)

No data available for Orthologs for RPSAP46 Gene

Paralogs for RPSAP46 Gene

No data available for Paralogs for RPSAP46 Gene

Variants for RPSAP46 Gene

Additional Variant Information for RPSAP46 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPSAP46

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPSAP46 Gene

Disorders for RPSAP46 Gene

No disorders were found for RPSAP46 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPSAP46 Gene

Publications for RPSAP46 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPSAP46 Gene

Sources for RPSAP46 Gene

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